• Title/Summary/Keyword: Crop residues

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Molecular Cloning of Two Genes Encoding Cinnamate 4-Hydroxylase (C4H) from Oilseed Rape (Brassica napus)

  • Chen, An-He;Chai, You-Rong;Li, Jia-Na;Chen, Li
    • BMB Reports
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    • v.40 no.2
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    • pp.247-260
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    • 2007
  • Cinnamate 4-hydroxylase (C4H) is a key enzyme of phenylpropanoid pathway, which synthesizes numerous secondary metabolites to participate in development and adaption. Two C4H isoforms, the 2192-bp BnC4H-1 and 2108-bp BnC4H-2, were cloned from oilseed rape (Brassica napus). They both have two introns and a 1518-bp open reading frame encoding a 505-amino-acid polypeptide. BnC4H-1 is 57.73 kDa with an isoelectric point of 9.11, while 57.75 kDa and 9.13 for BnC4H-2. They share only 80.6% identities on nucleotide level but 96.6% identities and 98.4% positives on protein level. Showing highest homologies to Arabidopsis thaliana C4H, they possess a conserved p450 domain and all P450-featured motifs, and are identical to typical C4Hs at substrate-recognition sites and active site residues. They are most probably associated with endoplasmic reticulum by one or both of the N- and C-terminal transmembrane helices. Phosphorylation may be a necessary post-translational modification. Their secondary structures are dominated by alpha helices and random coils. Most helices locate in the central region, while extended strands mainly distribute before and after this region. Southern blot indicated about 9 or more C4H paralogs in B. napus. In hypocotyl, cotyledon, stem, flower, bud, young- and middle-stage seed, they are co-dominantly expressed. In root and old seed, BnC4H-2 is dominant over BnC4H-1, with a reverse trend in leaf and pericarp. Paralogous C4H numbers in Brassicaceae genomes and possible roles of conserved motifs in 5' UTR and the 2nd intron are discussed.

Persistent Organic Pollutants (POPs) Residues in Greenhouse Soil and Strawberry Organochlorine Pesticides (딸기 시설재배지 토양 및 농산물 중 잔류성유기오염물질(POPs)의 잔류량 - 유기염소계 농약)

  • Lim, Sung-Jin;Oh, Young-Tak;Jo, You-Sung;Ro, Jin-Ho;Choi, Geun-Hyoung;Yang, Ji-Yeon;Park, Byung-Jun
    • Korean Journal of Environmental Agriculture
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    • v.35 no.1
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    • pp.6-14
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    • 2016
  • BACKGROUND: Residual organochlorine pesticides (OCPs) are chemical substances that persist in the environment, bioaccumulate through the food web, and pose a risk of causing adverse effect to human health and the environment. They were designated as persistent organic pollutants (POPs) by Stockholm Convention. Greenhouse strawberry is economic crop in agriculture, and its cultivation area and yield has been increased. Therefore, we tried to investigate the POPs residue in greenhouse soil and strawberry.METHODS AND RESULTS: Extraction and clean-up method for the quantitative analysis of OCPs was developed and validated by gas chromatography (GC) with electron capture detector (ECD). The clean-up method was established using the modified quick, easy, cheap, effective, rugged, and safe(QuEChERS) method for OCPs in soil and strawberry. Limit of quantitation (LOQ) and recovery rates of OCPs in greenhouse soil and strawberry were 0.9-6.0 and 0.6-0.9 μg/kg, 74.4-115.6 and 75.6-88.4%, respectively. The precision was reliable sincerelative standard deviation (RSD) percentage (0.5-3.7 and 2.9-5.2%) was below 20, which was the normal percent value. The residue of OCPs in greenhouse soil was analyzed by the developed method, and dieldrin, β-endosulfan and endosulfan sulfate were detected at 1.6-23, 2.2-28.4 and 1.8-118.6 μg/kg, respectively. Those in strawberry were not detected in all samples.CONCLUSION: Dieldrin, β-endosulfan and endosulfan sulfate in a part of investigated greenhouse soil were detected. But those were not detected in investigated greenhouse strawberry. These results showed that the residue in greenhouse soil were lower level than bioaccumulation occurring.

Development of an Official Analytical Method for Determination of Aclonifen in Agricultural Products Using GC-ECD (GC-ECD를 이용한 농산물 중 제초제 aclonifen의 공정분석법 확립)

  • Ko, Ah-Young;Kim, Hee-Jung;Jang, Jin;Lee, Eun-Hyang;Joo, Yoon-Ji;Kwon, Chan-Hyeok;Son, Young-Wook;Chang, Moon-Ik;Rhee, Gyu-Seek
    • Korean Journal of Environmental Agriculture
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    • v.33 no.4
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    • pp.388-394
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    • 2014
  • BACKGROUND: Aclonifen is used as a systemic and selective herbicide to control a wide spectrum broad-leaf weeds by inhibition carotenoid biosynthesis, and then its MRLs(Maximum Residue Limits) will be determined in onion and garlic. In this study, a new official method was developed for aclonifen determination in agricultural products to routinely inspect the violation of MRL as well as to evaluate the terminal residue level. METHODS AND RESULTS: Aclonifen was extracted from crop samples with acetone and the extract was partitioned with dichloromethane and then purified by silica solid phase extraction(SPE) cartridge. The purified samples were detected GC using an ECD detector. Limits of detection(LOD) was 0.001 mg/kg and quantification(LOQ) was 0.005 mg/kg, respectively. For validation purposes, recovery studies were carried out at three different concentration levels (LOQ, $10{\times}LOQ$, $50{\times}LOQ$, n=5). The recoveries were ranged from 74.3 to 95.0% with relative standard deviations(RSDs) of less than 8%. All values were consistent with the criteria ranges requested in the Codex guidelines(CAC/GL 40). CONCLUSION: The proposed analytical method was accurate, effective and sensitive for aclonifen determination and it will be used to as an official method in Korea.

Possibility of Using Non-selective Herbicides as Desiccants for Improving Soybean Harvest Efficiency (콩 수확 효율 증진을 위한 건조제로서 비선택성 제초제의 활용 가능성)

  • Won, Ok Jae;Hong, Seo yeon;Suh, Eun Ji;Park, Jae-Sung;Lee, Hong Seok;Park, Jin-Ki;Ryu, Jong-Soo;Han, Won-Young;Han, Kil Su;Song, Duk Young
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.66 no.4
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    • pp.358-364
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    • 2021
  • This study was conducted to select a desiccant and determine its concentration for safe usage to improve the harvesting efficiency of soybeans. Soybeans were treated with a desiccant (non-selective herbicide) before and after the maturation stage. The drying effect of the desiccant was higher at earlier treatment times than at the maturation stage, but the difference was not statistically significant. The higher efficacy might be related to the drying process of the leaves and stems, with most of the leaves and stems having already been dried by the time of hand harvesting. Desiccant treatments had no adverse effects on soybean yield, weight of 100 grains, seed quality, or seed germination rate compared with the untreated control. Pesticide residue analysis showed minimum residue concentration to be lower than the tolerance level of pesticide residues. In conclusion, it was confirmed that the desiccant was effective in drying soybean, and that there was no damage to the quality of soybean seeds. In addition to the drying effect, the dessicant treatment also facilitates the removal of weeds that interfere with the mechanical harvest and improves harvesting efficiency through the drying of the growth imbalanced individual. The desiccant treatment is expected to shorten the mechanical harvesting time by 1-2 weeks. It is thought that the selection of the proper cultivation period for other crops after soybean cultivation will be more advantageous.

Effects of Rice Straw Amendment and Nitrogen Fertilization on Rice Growth and Soil Properties in Reclaimed Tidal Paddy Field

  • Lee, Sanghun;Bae, Hui-Su;Lee, Soo-Hwan;Lee, Kyeong-Bo;Noh, Tae-Hwan;Lee, Geon-Hwi
    • Korean Journal of Soil Science and Fertilizer
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    • v.48 no.3
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    • pp.205-212
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    • 2015
  • Farmers with forage barley (Hordeum vulgare L.)-rice (Oryza sativa L.) cropping system at reclaimed tidal lands burn crop residues to facilitate seedbed preparation or remove them for feed stock. This study was conducted to investigate the effect of rice straw amendment and N fertilization on soil properties and N uptake of rice under forage barely-rice cropping system at reclaimed tidal paddy field. Rice straw was applied at the rates of 0, 2.5 and $5.0ton\;ha^{-1}$ and N was fertilized at 0, 100, 200 and $400kg\;ha^{-1}$. Although there was no significant difference in the growth and yield of rice, fresh and dry weight of forage barely increased with increasing the amount of rice straw. The amount of N uptake of rice at harvesting stage was $65.8-69.2kg\;ha^{-1}$ by the amount of rice straw amendment, but there were no significant differences among rice straw amendment levels. After harvesting the rice, the soil salinity decreased with rice straw amendment compared to the control. After forage barely and rice cultivation, soil organic matter contents increased to $2.6-2.8g\;kg^{-1}$ and $3.2-3.5g\;kg^{-1}$, respectively. The amount of N uptake of rice at harvesting stage increased up to $82kg\;ha^{-1}$ in $400kg\;ha^{-1}$ N applied plots which were $37.8kg\;ha^{-1}$ higher than the control. Nitrogen fertilization decreased N recovery efficiency. The highest yield of rice was observed at $244kg\;ha^{-1}$ N fertilization level, but the optimum N level was estimated at $168kg\;ha^{-1}$ in order to keep the protein content of rice under 6.5%. Further researches on N uptake and application of organic matter according to soil salinity will be necessary to increase N use efficiency at reclaimed tidal paddy field.

Weed Control Efficacy of the Residues and its Aqueous Extract of Sorghum Shoots (수수 지상부의 부산물과 추출물의 제초활성)

  • Park, Su Hyuk;Won, Ok Jae;Le, Thi Hien;Eom, Min Yong;Hwang, Ki Seon;Hwang, Jae-Bok;Park, Kee Woong
    • Weed & Turfgrass Science
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    • v.4 no.3
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    • pp.243-248
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    • 2015
  • This study was conducted to investigate the ability for weed control of the shoot extract of sorghum (Sorghum bicolor (L.) Moench) and developing a sustainable weed management in organic farming. When the dried shoot powder was mixed with soil and treated with 2 cm above the soil surface, the germination for Echinochloa crus-galli, Digitaria cilialis, Abutilon theophrasti and Amaranthus retroflexus was inhibited maxium 40%. The growth inhibition of germinated seedlings in the A. theophrasti and A. retroflexus was maxium 30% while it was less than 30% in the E. crus-galli and D. cilialis. Shoot extracts at rates above $25mg\;ml^{-1}$ was effective to inhibit germination of D. cilialis, A. theophrasti and A. retroflexus. The shoot extract concentration required for 50% of germination inhibition was $60mg\;ml^{-1}$ in the E. crus-galli, while it was less than $10mg\;ml^{-1}$ in the D. cilialis, A. theophrasti and A. retroflexus. For the foliar application, 11 adjuvants were tested at 0.5% and DOS70, TM15 and TDE7 were most effective adjuvants for the shoot extracts. DOS70 was most effective and provided up to 60% of weed control efficacy for the tested four weed species. Though herbicidal efficacy of sorghum shoot was not enough to give a proper weed control, it can be expected that long term use of sorghum shoots can provide gradual decrease in weed seeds and weed density.

Effects of Irrigation and Ginseng Root Residue on Root Rot Disease of 2-Years-Old Ginseng and Soil Microbial Community in the Continuous Cropping Soil of Ginseng (인삼 연작토양에서 관수 및 인삼뿌리 잔사물이 토양 미생물상 및 뿌리썩음병 발생에 미치는 영향)

  • Lee, Sung Woo;Lee, Seung Ho;Seo, Moon Won;Park, Kyung Hoon;Jang, In Bok
    • Korean Journal of Medicinal Crop Science
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    • v.26 no.5
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    • pp.345-353
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    • 2018
  • Background: Some phenolics detected in the soil may inhibit the seed germination and seedling growth of ginseng (Panax ginseng). This study investigated the effect of irrigation and ginseng root residue addition on the soil microbial community and root rot disease in 2-year-old ginseng. Methods and Results: Each $20{\ell}$ pot was filled with soil infected with ginseng root rot pathogens, and irrigated daily with $2{\ell}$ of water for one month. After the irrigation treatment, ginseng fine root powder was mixed with the irrigated soil at a rate of 20 g per pot. In descending order, ${NO_3}^-$, electric conductivity (EC), exchangeable Na (Ex. Na) and K (Ex. K) decreased due to irrigation. In descending order, ${NO_3}^-$, EC, Ex. K, and available $P_2O_5$ increased with the additon of ginseng powder to the soil. The abundance of Trichoderma crassum decreased with irrigation, but increased again with the incorporation of ginseng powder. The abundance of Haematonectria haematococca increased with irrigation, but decreased with the incorporation of ginseng powder. The abundance of Cylindrocarpon spp. and Fusarium spp., which cause ginseng root rot, increased with the incorporation of ginseng powder. The abundance of Arthrobacter oryzae and Streptomyces lavendulae increased with irrigation. The abundance of Streptomyces lavendulae decreased, and that of Arthrobacter spp. increased, with the incorporation of ginseng powder. Aerial growth of ginseng was promoted by irrigation, and ginseng root rot increased with the incorporation of ginseng powder. Conclusions: Ginseng root residues in the soil affected soil nutrients and microorganisms, and promoted ginseng root rot, but did not affect the aerial growth of ginseng.

NUTRITIVE VALUE OF SILAGES PREPARED FROM FIBER AND LIQUID RESIDUES AFTER THE SEPARATION OF LEAF NUTRIENT CONCENTRATE FROM ITALIAN RYEGRASS IN GOATS

  • Reddy, G.U.;Oshima, M.;Nishino, N.
    • Asian-Australasian Journal of Animal Sciences
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    • v.5 no.2
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    • pp.249-256
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    • 1992
  • Italian ryegrass (Lolium multiflorum Lam.) was fractionated into leaf nutrient concentrate, fiber and deproteinised juice (DPJ). The fresh and fermented DPJs were concentrated and referred to as fresh deproteinised juice concentrate (FDPJC) and fermented deprotenised juice concentrate (FMTD DPJC). The FDPJC and FMTD DPJC were separately mixed with dried fiber and ensiled. Wilted crop silage and fresh fiber silage were also prepared from the same material crop. The nutritive value of these four silages were compared using four goats by $4{\times}4$ Latin square design. Green crop fractionation resulted lesser amount of crude protein and ash, and higher amount of neurtal detergent fiber, acid detergent fiber, cellulose and hemicellulose in fresh fiber. The pH of fresh fiber silage was lower than that of the other silages. Addition of FDPJC or FMTD DPJC to the dried fiber at ensiling did not improve the silage qualities; but all the silages were satisfactorily preserved. Goats fed these silages showed similar ruminal pH and total volatile fatty acid concentrations. But addition of FMTD DPJC was effective on increasing ruminal acetic acid concentration reducing propionic acid concentration. Ruminal n- and iso- butyric acid concentrations were proportional to that of propionic acid. High ammonia content of the silage containing FMTD DPJC was reflected to the ruminal ammonia concentration, urinary nitrogen excretion and serum urea level of goats. Inclusion of FDPJC or FMTD DPJC added 15 to 25% dry matter to the fiber silages with a little reduction in the digestibilities of most components of the silages.

Dissipation pattern of pesticide residues in/on different varieties of lettuce applied with foliar spraying under greenhouse condition (시설재배에서의 상추품종별 살포농약의 소실양상)

  • Lee, Hee-Dong;Ihm, Yang-Bin;Kwon, Hye-Young;Kim, Jin-Bae;Kyung, Kee-Sung;Kim, Chan-Sub;Oh, Byung-Youl;Im, Geon-Jae;Kim, Jang-Eok
    • The Korean Journal of Pesticide Science
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    • v.9 no.4
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    • pp.354-358
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    • 2005
  • The study was carried out to investigate dissipation pattern of pesticide residue in/on different varieties of lettuce applied with foliar spraying under greenhouse. The initial deposited amount of alpha-cypermethrin and imidacloprid in/on the crop was entirely corresponded with shape of the crop. Dissipation of deposited pesticide residue was supposed to be related with degradation by sunlight and wash off by watering rather than dilution effect by biomass increase. The crop grouping in leaf vegetables has to be carefully considered even in lettuce for dissipation pattern of pesticide residue; head type and leafy type.

Ribgrass Mosaic Tobamovirus Occurred on Chinese Cabbage in Korea

  • Kim, Jeong-Soo;Cho, Jeom-Deog;Choi, Hong-Soo;Lee, Soo-Heon;Choi, Gug-Seoun;Lee, Sang-Yong;Kim, Hye-Jeong;Yoon, Moo-Kyoung
    • The Plant Pathology Journal
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    • v.26 no.4
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    • pp.328-339
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    • 2010
  • A tobamovirus, Ribgrass mosaic virus (RMV), was identified newly from chinese cabbage (Brassica campestris L. pekinensis) in Korea. Virus disease incidence of RMV on chinese cabbage was 37.9% in alpine area on August in 1993. RMV induced the symptoms of necrotic ring spots, necrotic streak on midrib and malformation. RMV, Ca1 and Ca3 isolate, could infect 35 species out of 45 plants including Chenopodium amaranticolor. Physical properties of RMV Ca1 isolate were very stable as 10.8 over for dilution end point, $95^{\circ}C$ for temperature inactivation point and 18 weeks for longevity in vitro. RMV had the soil transmission rate of 75.0% for the chinese cabbages, 'Chunhawang' and 'Seoul' cultivars. The purified virions of RMV had the typical ultraviolet absorption spectrum of maximum at 260 nm and minimum at 247 nm. RMV of Ca1 isolate was related serologically with antisera of Tobacco mosaic virus (TMV)-Cym, TMV-O and Pepper mottle virus, but not related with antiserum of Odontoglossum ring spot virus. coat protein gene of RMV-Ca1, sized 473 nucleotides, encoded 158 amino acid residues. Nucleotide identity of RMV-Ca1 CP gene was 96.4% with RMV-Shanghai (GenBank accession No. of AF185272) from China and 96.0% with RMV-Impatiens (GenBank accession No. of AM040974) from Germany. Identity of amino acids between RMV-Ca1 and the two RMV isolates was 96.8%. Specific three primers were selected for rapid and easy genetic detection of RMV using Virion Captured (VC)/RT-PCR method.