• 한국자원식물학회:학술대회논문집
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• 한국자원식물학회 2020년도 추계국제학술대회
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• pp.14-14
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• 2020

In December 2019, the COVID-19 epidemic was discovered in Wuhan, China, and since has disseminated around the world impacting human health for millions. Herein, in-silico drug discovery approaches were utilized to identify potential candidates as Severe Acute Respiratory Syndrome coronavirus 2 (SARS-CoV-2) main protease (M^pro) inhibitors. We investigated several databases including natural and natural-like products (>100,000 molecules), DrugBank database (10,036 drugs), major metabolites isolated from daily used spices (32 molecules), and current clinical drug candidates for the treatment of COVID-19 (18 drugs). All tested compounds were prepared and screened using molecular docking techniques. Based on the calculated docking scores, the top ones from each project under investigation were selected and subjected to molecular dynamics (MD) simulations followed by molecular mechanics-generalized Born surface area (MM-GBSA) binding energy calculations. Combined long MD simulations and MM-GBSA calculations revealed the potent compounds with prospective binding affinities against M^pro. Structural and energetic analyses over the simulated time demonstrated the high stabilities of the selected compounds. Our results showed that 4-bis([1,3]dioxolo)pyran-5-carboxamide derivatives (natural and natural-like products database), DB02388 and Cobicistat (DB09065) (DrugBank database), salvianolic acid A (spices secondary metabolites) and TMC-310911 (clinical-trial drugs database) exhibited high binding affinities with SARS-CoV-2 M^pro. In conclusion, these compounds are up-and-coming anti-COVID-19 drug candidates that warrant further detailed in vitro and in vivo experimental estimations.

• 농약과학회지
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• 제2권2호
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• pp.29-38
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• 1998

Phenobarbital sodium(PB) 또는 3-methylcholanthrene(3-MC)이 살충제 carbofuran의 쥐에 대한 독성과 이의 독성경감효과를 구명하기 위하여 이들을 단독 또는 조합으로 경구투여한 후 쥐의 생존율을 조사하였고, 쥐에서 carbofuran 의 in vitro 대사에 미치는 영향을 구명하기 위하여 쥐 간의 추출액에 이들을 단독 또는 조합으로 처리한 후 대사산물을 조사하였다. 쥐에 대한 carbofuran의 $LD_{50}$(96hrs)은 6.9 mg/kg이었고, 주 대사산물의 독성은 3-hydroxycarbofuran > 3-ketocarbofuran > 3-hydroxycarbofuran phenol 순으로 높게 나타났으며, 모화합물보다는 그 독성이 매우 낮았다. 쥐의 생존율은 carbofuran 8.4 mg/kg만을 투여했을 때 0%이었으나 carbofuran과 PB 또는 3-MC 20 mg/kg을 각각 조합투여시 $60{\sim}80%$로 높아졌고, 60 mg/kg 투여시에는 100% 생존하여 PB 및 3-MC의 carbofuran에 대한 독성경감 효과가 매우 컸다. 간 추출액에서 in vitro 대사의 대부분은 microsomal fraction에서 이루어지고 있었다. Carbofuran 단독처리시 주 대사산물은 3-hydroxycarbofuran이었으나 carbofuran과 PB 또는 3-MC 조합처리시 3-ketocarbofuran이었다. 또한, 기질 및 처리별 대사산물의 생성율을 조사한 결과 microsomal fraction에 carbofuran 단독 및 PB 또는 3-MC와의 조합처리 모두 co-factor로서 NADP+G-6-P+G-6-P-DG 첨가시(phase I system) 가장 높았고, $105,000{\times}g$ 상징액에서는 carbofuran 단독처리의 경우 co-factor로서 NADPH+ GSH 첨가시(phase II system)에 그리고 PB 또는 3-MC와 조합처리의 경우 co-factor 중 NADPH+FAD 첨가시(phase II system)에 가장 높았다. 대사산물 생성율은 carbofuran 단독처리보다 carbofuran과 PB 또는 3-MC 조합처리에서 $2{\sim}3$배 높았다.

• 한국생명과학회:학술대회논문집
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• 한국생명과학회 2005년도 제45회 학술심포지움 및 추계학술대회
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• pp.68-68
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• 2005

• 대한약학회:학술대회논문집
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• 대한약학회 2003년도 Proceedings of the Convention of the Pharmaceutical Society of Korea Vol.2-2
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• pp.214.2-214.2
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• 2003

Eupatilin (5,7-dihydroxy-3",4",6-trimethoxyflavone) is an active ingredient of an ethanol extract of Artemisia asiatica (DA-9601) that is used in the treatment of gastritis. In vitro and in vivo metabolism of eupatilin in the rats has been studied by LC- electrospray mass spectrometry. Rat liver microsomal incubation of eupatilin in the presence of NADPH and UDPGA resulted in the formation of four metabolites (M1-M4). M1, M2, M3 and M4 were tentatively identified as 3"- or- 4"-O-demethyl-eupatilin glucuronide, eupatilin glucuronide, 6-O-demethyleupatilin and 3"-or 4"-O-demethyl- eupatilin glucuronide, eupatilin glucuronide, 6-O-demethyleupatilin and 3"-or 4"-O- demethyl-eupatilin glucuronide, eupatilin glucuronide, 6-O demethyleupatilin and 3"-or 4"-O-demethyl-eupatilin glucuronide, respectively. (omitted)

• Journal of Microbiology and Biotechnology
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• 제19권4호
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• pp.409-415
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• 2009

Galactomyces geotrichum MTCC 1360 degraded the Scarlet RR(100 mg/l) dye within 18 h, under shaking conditions(150 rpm) in malt yeast medium. The optimum pH and the temperature for decolorization were pH 12 and $50^{\circ}C$, respectively. Enzymatic studies revealed an induction of the enzymes, including flavin reductase during the initial stage and lignin peroxidase after complete decolorization of the dye. Decolorization of the dye was induced by the addition of $CaCO_3$ to the medium. EDTA had an inhibitory effect on the dye decolorization along with the laccase activity. The metabolites formed after complete decolorization were analyzed by UV-VIS, HPLC, and FTIR. The GC/MS identification of 3 H quinazolin-4-one, 2-ethylamino-acetamide, 1-chloro-4-nitro-benzene, N-(4-chloro-phenyl)-hydroxylamine, and 4-chloro-pheny-lamine as the final metabolites corroborated with the degradation of Scarlet RR. The phytotoxicity study revealed the nontoxic nature of the final metabolites. A possible degradation pathway is suggested to understand the mechanism used by G. geotrichum and thereby aiding development of technologies for the application of this organism to the cleaning-up of aquatic and terrestrial environments.

• 농약과학회지
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• 제6권2호
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• pp.64-71
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• 2002

Pseudomonas cepacia로부터 유래한 quinolinone 대사물질인 2-(2-hepteny)-3-methyl-4-quinolinone (1), 2-heptyl-3-methyl-4-quinolinone, 2-nonyl-3-methyl-4-quinolinone 및 합성물질 ethyl 2-methyl-3-alkyl-4-quinolinone carboxylate의 식물생장촉진 효과를 보기 위해 종자발아검정 및 경엽처리 후의 생장량을 측정하였다. 또한 종자침지 및 관주 처리후의 초고, 생체중, 과실수도 조사하였다. 화합물 1은 종자발아 효과와 경엽처리 후에 일관된 생장촉진 효과를 보였다. 종자침지와 관주처리 후에, 화합물 1과 합성물질 ethyl 2-methyl-4-quinolinone-3-carboxylate (5)를 처리한 식물에서의 생체중과 과실수는 크게 증가하였다. 화합물1과 5는 대조관보다 각각 44%와 84%의 과실수 증가를 나타냈다.

• Journal of Microbiology and Biotechnology
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• 제28권8호
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• pp.1260-1269
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• 2018

Production of good Koji primarily depends upon the selection of substrate materials and fermentative microflora, which together influence the characteristic flavor and aroma. Herein, we performed comparative metabolomic analyses of volatile organic compounds (VOCs) and primary metabolites for Koji samples fermented individually with Bacillus amyloliquefaciens and Aspergillus oryzae. The VOCs and primary metabolites were analyzed using headspace solid phase microextraction (HS-SPME) followed by gas chromatography time-of-flight mass spectrometry (GC-TOF-MS). In particular, alcohols, ketones, and furans were mainly detected in Bacillus-fermented Koji (Bacillus Koji, BK), potentially due to the increased levels of lipid oxidation. A cheesy and rancid flavor was characteristic of Bacillus Koji, which is attributable to high content of typical 'off-flavor' compounds. Furthermore, the umami taste engendered by 2-methoxyphenol, (E,E)-2,4-decadienal, and glutamic acid was primarily detected in Bacillus Koji. Alternatively, malty flavor compounds (2-methylpropanal, 2-methylbutanal, 3-methylbutanal) and sweet flavor compounds (monosaccharides and maltol) were relatively abundant in Aspergillus-fermented Koji (Aspergillus Koji, AK). Hence, we argue that the VOC profile of Koji is largely determined by the rational choice of inocula, which modifies the primary metabolomes in Koji substrates, potentially shaping its volatolome as well as the aroma characteristics.

• 한국동물학회지
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• 제33권4호
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• pp.493-498
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• 1990

Antimetabolited인 6-aminonicotinamide(6-AN)가 토끼의 혈청내 효소 및 대사 물질에 미치는 영향에 관하여 연구하였다. 복강투여시 (l5mg/kg의 체중) 포도당과 콜레스테놀농도는 현저이 증가하였으나 알부민고 총단백질량은 크게 변하지 않았다. Creatine phophokinase,glutamic oxaloacetate transaminase,glutamic pyruvate transaminase 및 alctate dehydrogensenase활성은 매우 증가하였으며 alkaline phosphatase와 Ca, P, Na, K, Cl 및 Co등의 수준은 영향을 받지 않았다.

• 한국임상약학회지
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• 제7권2호
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• pp.51-63
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• 1997

The effect of cimetidine administration on the pharmacokinetic parameters of cyclosporine were determined in healthy voluteers. This study was performed in 10 volunteers of age ranged 22-48 years and body weight 48-62 kg. This study was performed with cross-over design. Mono cyclosporine and cyclosporine metabolites was extracted from whole blood analysed by fluororescence polarization immune assay (TDX-FLX, Abbott). After coadministration of cimetidine (300 mg) with cyclosporine (300 mg) orally, maximum concentration of mono cyclosporine was significantly increased $1221{\pm}143\;ng/ml\;to\;1562{\pm}184\;ng/ml$ (P<0.05), area under the time curve of cyclosporine (12 hr) also was significantly increased $7478{\pm}829\;ng/ml{\cdot}hr\;to\;9721{\pm}879\;ng/ml{\cdot}hr$ (P<0.05) and absolute baioavailability of cyclosporine was increased $50\pm5.6\%\;to\;57.6\pm6.1\%\;(P<0.05)$ compared to control group. The blood concentrations of cyclopsorine metabolites were significantly decrased (P<0.05) after coadministration of cimetidine. In cimetidine pretreated group, blood mono cyclosporine concentrations were increased significan시y $1220.0\pm203.00\;ng/ml\;to\;1510.0\pm204.00\;ng/ml$ compared with control group (P<0.05). In the mono cyclosporine pharmacokinetic parameter after oral administration absorption rate and maximum concentration were significantly higher in cimetidine coadministered and pretreated group than control group (P<0.05). The ratio of metabolites and mono cyclosporine concentrations was decreased significantly from $70.8\%\;in\;control\;to\;34.8\%$ in coadministration of cimetidine orally. As matter of facts these reults are considered to inhibition of cyclosporine hepatic metabolism and increasing of cyclosporine absorption rate in gastrointestinal tract because of maintaining cyclosporine stability in elevated gastric pH by cimetidine. We considered, it appeares that cimetidine increase bioavailability of cyclosporine by increasing oral absorption and by decreasing hepatic clearance. But the absorption and clearance of cyclosporine was highly variable individually, and therefore we consider that cyclosporine blood level monitoring would be essential in patients with cimetidine co-administration.

• Journal of Microbiology and Biotechnology
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• 제18권1호
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• pp.135-137
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• 2008

The metabolic engineering of epothilones, as secondary metabolites, was investigated using Sorangium cellulosum to achieve the selective production of epothilone B, a potent anticancer agent. Thus, the propionyl-CoA synthetase gene (prpE) from Ralstonia solanacearum was heterologously expressed in S. cellulosum to increase the production of epothilone B. Propionyl-CoA synthetase converts propionate into propionyl-CoA, a potent precursor of epothilone B. The recombinant S. celluloslim containing the prpE gene exhibited a significant increase in the resolution of epothilones B/A, with an epothilone B to A ratio of 127 to 1, which was 100 times higher than that of the wild-type cells, demonstrating its potential use for the selective production of epothilone B.