• Title/Summary/Keyword: Cluster Host

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Heterologous Production and Detection of Recombinant Directing 2-Deoxystreptamine (DOS) in the Non-Aminoglycoside-Producing Host Streptomyces venezuelae YJ003

  • Kurumbang, Nagendra Prasad;Oh, Tae-Jin;Liou, Kwangkyoung;Sohng, Jae-Kyung
    • Journal of Microbiology and Biotechnology
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    • v.18 no.5
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    • pp.866-873
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    • 2008
  • 2-Deoxystreptamine is a core aglycon that is vital to backbone formation in various aminoglycosides. This core structure can be modified to develop hybrid types of aminoglycoside antibiotics. We obtained three genes responsible for 2-deoxystreptamine production, neo7, neo6, and neo5, which encode 2-deoxy-scyllo-inosose synthase, L-glutamine: 2-deoxy-scyllo-inosose aminotransferase, and dehydrogenase, respectively, from the neomycin gene cluster. These genes were cloned into pIBR25, a Streptomyces expression vector, resulting in pNDOS. The recombinant pNDOS was transformed into a non-aminoglycoside-producing host, Streptomyces venezuelae YJ003, for heterologous expression. Based on comparisons of the retention time on LC-ESI/MS and ESI-MS data with those of the 2-deoxystreptamine standard, a compound produced by S. venezuelae YJ003/pNDOS was found to be 2-deoxystreptamine.

Resistance to Turnip Mosaic Virus in the Family Brassicaceae

  • Palukaitis, Peter;Kim, Su
    • The Plant Pathology Journal
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    • v.37 no.1
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    • pp.1-23
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    • 2021
  • Resistance to diseases caused by turnip mosaic virus (TuMV) in crop species of the family Brassicaceae has been studied extensively, especially in members of the genus Brassica. The variation in response observed on resistant and susceptible plants inoculated with different isolates of TuMV is due to a combination of the variation in the plant resistome and the variation in the virus genome. Here, we review the breadth of this variation, both at the level of variation in TuMV sequences, with one eye towards the phylogeny and evolution of the virus, and another eye towards the nature of the various responses observed in susceptible vs. different types of resistance responses. The analyses of the viral genomes allowed comparisons of pathotyped viruses on particular indicator hosts to produce clusters of host types, while the inclusion of phylogeny data and geographic location allowed the formation of the host/geographic cluster groups, the derivation of both of which are presented here. Various studies on resistance determination in particular brassica crops sometimes led to further genetic studies, in many cases to include the mapping of genes, and in some cases to the actual identification of the genes. In addition to summarizing the results from such studies done in brassica crops, as well as in radish and Arabidopsis (the latter as a potential source of candidate genes for brassica and radish), we also summarize work done using nonconventional approaches to obtaining resistance to TuMV.

Mean Velocity of Globular Cluster Systems in M86 Virgo Giant Elliptical Galaxy and Massive Early-Type Galaxies

  • Park, Hong Soo;Lee, Myung Gyoon;Arimoto, Nobuo
    • The Bulletin of The Korean Astronomical Society
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    • v.40 no.2
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    • pp.33.3-34
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    • 2015
  • We present the spectroscopic study of the globular clusters (GCs) in the massive elliptical galaxy M86 in the Virgo galaxy cluster. Using the spectra obtained from the Multi-Object Spectroscopy (MOS) mode of Faint Object Camera and Spectrograph (FOCAS) on the Subaru Telescope, we measure the radial velocities for 56 GCs in M86. The mean velocity of the GCs is derived to be $<v_p>=-335{\pm}41km/s$, which is different from the velocity of the M86 nucleus ($<v_{gal}>=-224{\pm}5km/s$) within ${\sim}2.5{\sigma}$. The mean velocity ($<v_p>=-342{\pm}60km/s$) of 33 blue GCs in M86 is similar to that ($<v_p>=-314{\pm}71km/s$) of 23 red GCs. We also derive the mean velocities of the GC systems in other 16 nearby early-type galaxies (ETGs) from the radial velocity data in the literature. The mean value of the differences between the mean velocity of the GC systems in each galaxy and the nucleus velocity of their host galaxies, is almost zero except the M86 GC system. But the scatter of the differences in the blue GC system is larger than that in the red GC system. We will discuss these results in the context of GC formation in ETGs.

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Hubble Space Telescope's Near-IR and Optical Photometry of Globular Cluster Systems in the Fornax and Virgo Clusters of Galaxies

  • Cho, Hyejeon;Blakeslee, John P.;Lee, Young-Wook
    • The Bulletin of The Korean Astronomical Society
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    • v.39 no.2
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    • pp.69.2-69.2
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    • 2014
  • We present space-based near-IR (NIR) and optical photometry of globular clusters (GCs) of 16 early-type galaxies in the Fornax and Virgo Clusters. The NIR imaging data for the nearby galaxies was acquired with the IR Channel of the Wide Field Camera 3 (WFC3/IR) in the F110W ($J_{110}$) and F160W ($H_{160}$) bandpasses. We introduce the full sample of our WFC3/IR program, describe data reductions and photometric measurements including GC candidate selection criteria, and then show selected GCs' color-magnitude diagrams. The tilted features in the diagrams related to the morphological types of host galaxies are discussed in the context of galaxy formation and evolution histories. Combining F475W ($g_{475}$) and F850LP ($z_{850}$) data taken from the Advanced Camera for Surveys Virgo and Fornax Cluster Surveys with our NIR data, we investigate the bimodality in optical-NIR color distribution and the nonlinear feature of the optical-NIR color relation as a function of optical color for these extragalactic GC systems.

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The Globular Cluster System of the Virgo Giant Elliptical Galaxy NGC 4636

  • Park, Hong-Soo
    • The Bulletin of The Korean Astronomical Society
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    • v.35 no.1
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    • pp.55.2-55.2
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    • 2010
  • We present a photometric and spectroscopic study of the globular clusters (GCs) in the giant elliptical galaxy NGC 4636 in the Virgo cluster. The photometry of the GCs is based on HST/WFPC2 images for the inner region and deep, wide field Washington $CT_1$ CCD images for the outer region. We investigated the color distribution, the radial number density profile, the spatial distribution, and the mean color of the bright blue GCs about the GCs in NGC 4636. We obtained spectra of the GC candidates in NGC 4636 using the Multi-Object Spectroscopy (MOS) mode of Faint Object Camera and Spectrograph (FOCAS) on the SUBARU 8.2m Telescope. We measured the velocities for 105 GCs in NGC 4636. Using the 238 GCs obtained from combining our results with data in the literature, we investigated the kinematics of the GC system of NGC 4636: the rotation, the velocity dispersion, the radial variation, and the orbit. We also investigated the distribution and the radial variation of the metallicities, ages, and alpha-elements of the GCs in NGC 4636 derived using the absorption lines. We compared the GC kinematics of NGC 4636 with those of other six gEs, finding that the kinematic properties of the GCs are diverse among gEs. We found several correlations between the kinematics of the GCs and the global parameters of their host galaxies. Finally we discuss the implication of the results for the formation models of the GC system in gEs, and suggest a mixture scenario for the origin of the GCs in gEs.

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IP Multicasting Scheme in ATM Networks (ATM망에서 다중 멀티캐스팅 서버를 이용한 IP 멀티캐스팅 방안)

  • Byeon, Tae-Yeong;Jang, Seong-Sik;Han, Gi-Jun
    • Journal of KIISE:Computer Systems and Theory
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    • v.26 no.9
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    • pp.1145-1157
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    • 1999
  • 본 논문에서는 RFC 2022에서 제안한 MARS 모델을 기반으로 하여 단일 대규모 클러스터를 가지는 ATM 망에서 다중의 멀티캐스팅 서버(MCS)를 이용한 멀티캐스팅 방안을 제안하고 그 성능을 평가하였다. 클러스터 내의 한 ATM 호스트가 특정 IP 멀티캐스트 그룹에 가입할 경우 ATM 호스트의 위치와 이미 존재하는 멀티캐스팅 서버들 사이의 전송 지연을 고려하여 가능한 한 종단간 전송 지연을 최소화하는 멀티캐스팅 서버를 선택하는 방안을 기술하였다. 이 방안은 최단거리 경로 알고리즘(shortest path algorithm)에 기반하여 최적의 MCS를 선정하고 송수신자 사이의 최소 지연을 가지는 멀티캐스트 트리를 구성한다. 다양한 망 위상에서 MCS의 분포 패턴을 다르게 할 경우에도 이 방안은 멀티캐스트 트리의 평균 전달 지연을 줄이는 것을 시뮬레이션을 통하여 확인하였다.Abstract In this paper, we proposed a scheme to support multiple MCSs over a single and large cluster in ATM networks, evaluated its performance by simulation. When an ATM host requests joining into a specific multicast group, the MARS designate a proper MCS among the multiple MCSs for the group member to minimize the average path delay between the sender and the group members. This scheme constructs a multicast tree through 2-phase partial multicast tree construction based upon the shortest path algorithm.We reduced the average path delay in multicast tree using our scheme under various cluster topologies and MCS distribution scenarios.

A Study on Detection Improvement Technique of Black Hole Node in Ad Hoc Network (Ad Hoc Network에서 블랙 홀 노드 탐지 향상 기법에 관한 연구)

  • Yang, HwanSeok;Yoo, SeungJae
    • Convergence Security Journal
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    • v.13 no.6
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    • pp.11-16
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    • 2013
  • Mobile node must move optionally and perform the router and the host functions at the same time. These characteristics of nodes have become a potential threatening element of a variety of attacks. In particular, a black hole which malicious node causes packet loss among them is one of the most important issues. In this paper, we propose distributed detection technique using monitoring tables in all node and cooperative detection technique based cluster for an efficient detection of black hole attack. The proposed technique performs by dividing into local detection and cooperative detection process which is composed of process of step 4 in order to improve the accuracy of the attack detection. Cluster head uses a black hole list to cooperative detection. The performance of the proposed technique was evaluated using ns-2 simulator and its excellent performance could be confirmed in the experiment result.

Variable Blue Stragglers in the Metal-Poor Globular Clusters in the Large Magellanic Cloud - Hodge 11 and NGC1466

  • Yang, Soung-Chul;Bhardwaj, Anupam
    • The Bulletin of The Korean Astronomical Society
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    • v.46 no.1
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    • pp.35.2-35.2
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    • 2021
  • Blue straggler stars (BSs) are "rejuvenated" main sequence stars first recognized by Allan Sandage from his observation of the prominent northern globular cluster M3 in the year of 1953. BSs are now known to be present in diverse stellar environments including open clusters, globular clusters, dwarf galaxies, and even the field populations of the Milky Way. This makes them a very useful tool in a wide range of astrophysical applications: Particularly BSs are considered to have a crucial role in the evolution of stellar clusters because they affect on the dynamics, the binary population, and the history of the stellar evolution of the cluster they belong to. Here we report a part of the preliminary results from our ongoing research on the BSs in the two metal-poor globular clusters (GCs) in the Large Magellanic Cloud (LMC), Hodge 11 and NGC1466. Using the high precision multi-band images obtained with the Advanced Camera for Survey (ACS) onboard the Hubble Space Telescope (HST), we extract time-series photometry to search for the signal of periodic variations in the luminosity of the BSs. Our preliminary results confirm that several BSs are intrinsic "short period (0.05 < P < 0.25 days)" variable stars with either pulsating or eclipsing types. We will discuss our investigation on the properties of those variable BS candidates in the context of the formation channels of these exotic main sequence stars, and their roles in the dynamical evolution of the host star clusters.

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The Relative Role of Bars and Galaxy Environments in AGN Triggering of SDSS Spirals

  • Choi, Yun-Young;Kim, Minbae
    • The Bulletin of The Korean Astronomical Society
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    • v.46 no.1
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    • pp.31.3-32
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    • 2021
  • We quantify the relative role of galaxy environment and bar presence on AGN triggering in face-on spiral galaxies using a volume-limited sample with 0.02 < z < 0.055, Mr < 19.5, and σ > 70 km s-1 selected from Sloan Digital Sky Survey (SDSS) Data Release 7. To separate their possible entangled effects, we divide the sample into bar and non-bar samples, and each sample is further divided into three environment cases of isolated galaxies, interacting galaxies with a pair, and cluster galaxies. The isolated case is used as a control sample. For these six cases, we measure AGN fractions at a fixed central star formation rate and central velocity dispersion, σ. We demonstrate that the internal process of the bar-induced gas inflow is more efficient in AGN triggering than the external mechanism of the galaxy interactions in groups and cluster outskirts. The significant effects of bar instability and galaxy environments are found in galaxies with a relatively less massive bulge. We conclude that from the perspective of AGN-galaxy coevolution, a massive black hole is one of the key drivers of spiral galaxy evolution. If it is not met, a bar instability helps the evolution, and in the absence of bars, galaxy interactions/mergers become important. In other words, in the presence of a massive central engine, the role of the two gas inflow mechanisms is reduced or almost disappears. We also find that bars in massive galaxies are very decisive in increasing AGN fractions when the host galaxies are inside clusters.

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Plant Cell Contact-Dependent Virulence Regulation of hrp Genes in Pseudomonas syringae pv. tabaci 11528 (Pseudomonas syringae pv. tabaci 에서 식물세포접촉에 의한 병원성 유전자의 조절)

  • Lee, Jun-Seung;Cha, Ji-Young;Baik, Hyung-Suk
    • Journal of Life Science
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    • v.21 no.2
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    • pp.227-234
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    • 2011
  • The hrp gene cluster in the plant pathogen Pseudomonas syringae is a key determinant of pathogenicity. Recent studies have demonstrated that specific host cell induction of the Ralstonia solanacearum hrp gene cluster is controlled by the PrhA (plant regulator of hrp) receptor. To characterize the role that P. syringae PrhA plays in the virulence of plant cells, a prhA homolog was isolated from P. syringae pv. tabaci and a $\Delta$prhA mutant was constructed by allelic exchange. The $\Delta$prhA mutant had reduced virulence in the host plant, and co-culture of P. syringae pv. tabaci and plant cell suspensions induced a much higher level of hrpA gene transcription than culture in hrp-inducing minimal medium. These results indicate that PrhA of P. syringae is a putative pathogen-plant cell contact sensor, therefore, we used a hrpA-gfp reporter fusion to monitor the in situ expression of PrhA. The results of this study demonstrated that PrhA induces hrp gene expression in P. syringae pv. tabaci in the presence of plant cells.