• 제목/요약/키워드: Chemotaxonomic relationship

검색결과 7건 처리시간 0.019초

Chemotaxonomic and Phylogenetic Study on the Oligotrophic Bacteria Isolated from Forest Soil

  • Whang, Kyung-Sook
    • 한국미생물생명공학회:학술대회논문집
    • /
    • 한국미생물생명공학회 2000년도 Proceedings of 2000 KSAM International Symposium and Spring Meeting
    • /
    • pp.150-156
    • /
    • 2000
  • Oligotrophic bacteria isolated from forest soil showed a specific community consisting of various taxonomic groups compared with those in other soil or aquatic habitats. Based on the cell shape, the isolates were divided into four groups: regular rod, curved/spiral rod, irregular rod, and prosthecate bacteria. The cellular fatty acids 60 oligotrophic isolates were analyzed. The 30 fatty acids which were identified or characterized are classified. At the dendrogram based on cellular fatty acid composition, four clusters(I-IV) were separated at a euclidian distance of about 50. Cluster 3 and 4-a strains were containing Q-8, these strains are accommodated in the Proteobacteria gamma and beta subdivision. The chemotaxonomic profiles of the cluster 4-a strains showed good agreement with those of the genus Burkholderia. Cluster 3 was characterized by the presence of branched-chain fatty acids, iso-C15:0, iso-C17:1, and iso-C17:0 as the major components. These chemotaxonomy suggested the close relationship of the isolates with Xathomonas/Sterotrophomonas group. Based on the 16S rDNA sequence analysis, the two representative strains(MH256 and MA828) of cluster 3 showed the close relation to genera, Xathomonas/Sterotrophomonas, but were not included in these genera. These strains were even further away from core Xanthomonas, and clearly were seen to branch outside the cluster formed by the Sterotrophomonas maltophilia. MH256 and MA828 16S rDNA sequence was different enough to put new genus on a separate branch. The isolates with Q-10 were also studied. They are corresponded to the two large groups in Proteobacteria alpha subdivision. One was incorporated in the genus Bradyrhizobium cluster, which also includes Agromonas, a genus for oligotrophic bacteria. The strains of the other group showed high similarity to the genus Agrobacterium.

  • PDF

A Chemotaxonomic Study on Euphorbiaceae in Korea

  • Ahn, Byung-Tae;Lee, Seung-Ho;Ro, Jai-Seup;Lee, Kyong-Soon
    • Natural Product Sciences
    • /
    • 제1권1호
    • /
    • pp.86-98
    • /
    • 1995
  • A chemosystematic study on euphorbiaceous plants in Korea has been performed by using phenolic constituents. The phenolic characteristics of subfamilies, genera and species were well distinguished from one another. Hydrolyzable tannins as constituents were considered to be a valuable taxonomic character in elucidating systematic relationships among the related taxa whereas flavonoids could be used in the classification of infraspecific taxa in this family. The phenolic fingerprints of each of the plants would be considered as a good tool to identify the species. In comparison with the morphological classification system, the chemical relationship supported the subfamilial system of Webster (1975) and the further division of Euphorbia sensu lato by Hurusawa (1954).

  • PDF

Isolation and Characterization of Plant Growth Promoting Rhizobacteria From Button Mushroom Compost

  • Oh, Sung-Hoon;Lee, Chang-Jung;Yoon, Min-Ho
    • 농업과학연구
    • /
    • 제43권1호
    • /
    • pp.100-108
    • /
    • 2016
  • An auxin-producing bacteria (strain 5-1) was isolated from button mushroom compost in Boryeong-Si, Chungcheongnam-Do. The 5-1 strain was classified as a novel strain of Enterobacter aerogenes based on chemotaxonomic and phylogenetic analyses. The isolated E. aerogenes 5-1 was confirmed to produce indole-3-acetic acid (IAA), one of the auxin hormones, using TLC and HPLC analyses. When the concentration of IAA was assessed by performing HPLC quantitative analysis, a maximum concentration of IAA of $109.9mgL^{-1}$ was detected in the culture broth incubated in R2A medium containing 0.1% L-tryptophan for 24 h at $35^{\circ}C$. Acidification of the culture was deemed caused by an increase of IAA because a negative relationship between IAA production and pH was observed. Supplementation with a known precursor of IAA production, L-tryptophan, appeared to induce maximal production at 0.1% concentration, but it reduced production at concentrations above 0.2%. To investigate the growth-promoting effects to crops, the culture broth of E. aerogenes 5-1 was used to inoculate water cultures and seed pots of mung bean and lettuce. In consequence, adventitious root induction and root growth of mung bean and lettuce were two times higher than those of the control.

Chemotaxonomic Classification of Marine Bacteria on the Basis of Fatty Acid Compositions

  • KANG Won-Bae;SEONG Hee-Kyung;MOON Chang-Ho;LEE Won-Jae
    • 한국수산과학회지
    • /
    • 제30권6호
    • /
    • pp.1013-1020
    • /
    • 1997
  • The cellular fatty acids of 47 marine bacteria representing the genus Alteromonas, Arthrobacter, Bacillus, Micrococcus, Pseudomonas, Shewanella, Staphylococcus and Stenotrophomonas were determined by a gasliquid chromatographic analysis. Sixty-eight different fatty acids with 10 to 20 carbon atoms were detected in marine bacteria. Of the eight genus examined, 14:0, 16:0 and i17:0 were detected in all, while i14:0, a15:0, i16:0, and 15:0 were found in most of all. There were significant differences in the fatty acid patterns between Gram positive and Gram negative bacteria. Bacteria of Gram positive genus showed relatively high contents of the branched type fatty acids, while the major fatty acids in Gram negative were unsaturated and straight forms. Phylogenetic relationships between marine bacteria defined by the cellular fatty acid patterns represented obvious differences between Gram positive and Gram negative genera, even in respective genus. Therefore, the bacterial classification and identification can be accomplished more easily and rapidly based on the cellular fatty acid profiles than the conventional methods.

  • PDF

지방산 조성에 의한 vibrio cholerae non-O1의 화학분류학적 관계 (The Chemotoxonoic Relationship of Vibrio cholerae non-O1 by Fatty Acid Compositions)

  • 성희경;이원재;장동성
    • 한국식품위생안전성학회지
    • /
    • 제13권2호
    • /
    • pp.149-154
    • /
    • 1998
  • Vibrio cholerae non-O1 49균주와 V. Vibrio cholerae non-O1, V. mimicus, V. vulnificus와 V. parahaemolyticus의 균체 지방산(fatty acid methyl ester; FAME)을 gas liquid chromatogrphy로 분석하였다. 이들 분석자료를 통계학적으로 처리하여 Vibrio 종과 V. cholerae의 혈청형별 유연성을 비교 검토하였다. 검출된 지방산은 모두 41종이었고 분포량이 많은 것은 16:0, 16:1 cis 9, 18:1 trans 9/16/cis 11과 15:0 iso 2 OH/16:1 cis 9였다. 검출된 지방산 중에서 35종은 V. cholerae를 동정하는데 주요한 인자로 작용되었다 지방산분포를 UPGMA(비가중수리분석)으로 dendrogram을 작성한 결과 V. cholerae non-O!은 V. cholerae O1보다 V. choleare non-O1 중에서 O2, O5, O8, O10, O14, O27, O37, O39, O45와 O69의 총 10종류 혈청을 대상으로 지방산 조성에 의한 유사성을 검토한 결과 유사도가 92% 이상 수준에서 7개의 아종을 형성하여 혈청형과 지방산 조성간에는 유의할 만한 상관관계가 있었다. 따라서 V. cholerae non-O1의 동정 및 역학적인 조사시 지방산 분석은 유용하게 활용될수 있음을 알 수 있다.

  • PDF

양송이배지로부터 분리한 Klebsiella michiganensis Jopap-1의 식물생장촉진효과 (Plant growth promotion effect of Klebsiella michiganensis Jopap-1 isolated from button mushroom bed)

  • 김예슬;윤민호
    • 한국버섯학회지
    • /
    • 제16권3호
    • /
    • pp.218-224
    • /
    • 2018
  • An auxin-producing bacterium, Klebsiella michiganensis Jopap-1, was isolated from a button mushroom bed in Buyeo-Gun, Chungcheongnam-Do. The strain Jopap-1 was classified as a novel strain of K. michiganensis based on a chemotaxonomic and phylogenetic analysis. The isolated K. michiganensis Jopap-1 was confirmed to produce indole-3-acetic acid (IAA), which is one of auxin hormones by TLC and HPLC analyses. The maximum concentration of IAA ($96.05mg\;L^{-1}$) was detected in the culture broth incubated in R2A medium containing 0.1% L-tryptophan for 48 h at $35^{\circ}C$ by HPLC quantity analysis. A negative relationship between IAA production and pH variation was estimated to show that the increase of IAA caused acidic pH in the culture. The effect of the supplement on L-tryptophan (precursor of IAA) production was observed to be highest at 0.1% concentration, but was significantly lowered above a concentration of 0.2%. To investigate the growth-promoting effects on the crops, the culture broth of E. michiganensis Jopap-1 was infected to water cultures and seed pots of mung bean and lettuce. Consequently, the adventitious root induction and root growth of mung bean and lettuce were observed to be 2.1 and 1.8 times higher than those of the control.

양송이배지로부터 분리한 Arthrobacter enclensis Yangsong-1의 식물생장촉진효과 (Plant growth promotion effect of Arthrobacter enclensis Yangsong-1 isolated from a button mushroom bed)

  • 문서진;윤민호
    • 한국버섯학회지
    • /
    • 제17권1호
    • /
    • pp.12-18
    • /
    • 2019
  • 충청남도 부여군 석성면 양송이 재배 농가에서 양송이 수확 후 배지로부터 토양을 채취하여 auxin(IAA) 생성능이 뛰어난 세균 Yangsong-1 균주를 분리하였다. TLC 및 HPLC 분석을 통해 분리균이 생성한 IAA 농도를 확인한 결과, 0.2% L-tryptophan를 함유한 pH 7.0의 R2A broth 배지에 $35^{\circ}C$, 48시간 배양 시 최대 생성농도는 $126.33mg\;L^{-1}$이었다. 생리적 특성 및 계통학적특성 분석을 통해 분리균은 Gram 음성 간균인 Arthrobacter enclensis Yangsong-1로 동정되었다. 배양조건별 IAA의 생산능 비교 시, IAA 농도의 증가가 배양액의 pH 산성화에 기인함으로서 IAA 생성량과 pH 변화에는 부의 상관성이 있는 것으로 관측되었다. IAA 생성을 위한 전구물질로 알려진 L-tryptophan의 첨가효과는 0.2% 첨가 시 균 생육 및 IAA 생성량이 최대이었으며, 0.4% 이상 고농도 첨가 배지에서는 오히려 IAA의 생성이 저해되었다. 또한 분리균에 의한 식물생육촉진효과를 조사하기 위하여 수경재배 및 pot 재배를 통한 녹두발근 생검법과 상추발근 생검법을 수행한 결과, A. enclensis Yangsong-1의 배양액 접종 시 녹두발근 생검법에서는 대조구에 비해 발근수와 뿌리길이에서 약 1.5배의 뿌리신장효과를 보였고, 상추발근 생검법에서는 대조구에 비해 뿌리길이와 무게에서 약 1.9배의 뿌리신장효과를 보였다.