• Proceedings of the Korean Society of Fisheries Technology Conference
• /
• 2000.05a
• /
• pp.487-488
• /
• 2000

Genomic DNA was isolated from the marine microalgae representing genetic characteristics and genomic polymorphisms by polymerase chain reaction amplification of DNA as arbitrary primers. The electrophoretc analysis of PCR-RAPD products showed hig levels of variation between different genus and little variation between different species. Outer of these primers, 6 generated 248 highly reproducible RAPD markers, producing almost seven polymorphic bands per primers. The degree of similarity frequency between Chaetoceros gracilis and Chaetoceros calcitrans species showed 90％ as calculated by sharing analysis. The RAPD polymorphism generated by this primer may be used as a genetic marker for genus or species identification in important marine microalgae. (omitted)

• Proceedings of the Zoological Society Korea Conference
• /
• 2001.04a
• /
• pp.49-49
• /
• 2001

No Abstract, See Full Text

• Journal of Microbiology and Biotechnology
• /
• v.17 no.8
• /
• pp.1330-1337
• /
• 2007

To better understand the gene expression of the cold-adapted polar diatom, we conducted a survey of the Chaetoceros neogracile transcriptome by cDNA sequencing and expression of interested cDNAs from the Antarctic diatom. A non-normalized cDNA library was constructed from the C. neogracile, and a total of 2,500 cDNAs were sequenced to generate 1,881 high-quality expressed sequence tags (ESTs) (accession numbers EL620615-EL622495). Based on their clustering, we identified 154 unique clusters comprising 342 ESTs. The remaining 1,540 ESTs did not cluster. The number of unique genes identified in the data set is thus estimated to be 1,694. Taking advantage of various tools and databases, putative functions were assigned to 939 (55.4%) of these genes. Of the remaining 540 (31.9%) unknown sequences, 215 (12.7%) appeared to be C. neogracile-specific since they lacked any significant sequence similarity to any sequence available in the public databases. C. neogracile consisted of a relatively high percentage of genes involved in metabolism, genetic information processing, cellular processes, defense or stress resistance, photosynthesis, structure, and signal transduction. From the ESTs, the expression of these putative C. neogracile genes was investigated: fucoxanthin chlorophyll (chl) a,c-binding protein (FCP), ascorbate peroxidase (ASP), and heat-shock protein 90 (HSP90). The abundance of ASP and HSP90 changed substantially in response to different culture conditions, indicating the possible regulation of these genes in C. neogracile.

• 한국해양학회지
• /
• v.30 no.3
• /
• pp.163-169
• /
• 1995

A total of 190 phytoplankton taxa was identified in southern waters of the East Sea of Korea in May 1988, July 1989 and November 1991. Leptocylindrus danicus, Nitzschia pungens and Bacteriastrum delicatulum were the dominant species in spring. In summer, Skeletonema costatum was dominant all around the study area but Chaetoceros socialis and Rhizosolenia alata f. gracillima were locally dominant. On the other hand, the dominant species in autumn shifted to Chaeotoceros socialis, Nitzschia delicatissima, Nitzschia sp. and Gymnodinium sp. The average species diversities of the phytoplankton community were low in spring, summer and autumn, being 1.24, 1.69 and 2.12 respectively. The result of cluster analysis in summer suggested that the surface water of this study area could be divided into three phytohydrographic regions which consisted of the oceanic water region affected by Tsushima current, the east Korean neritic water region and the proper water region adjacent to Ulleung island. Compared with the surface phytohydrographic regions, one more region might be recognized at the 40m depth waters. It was appeared in the middle of study area and seemed to be affected by both Tsushima current and water mass of 10$^{\circ}C$ located deeper than 50m.

• ALGAE
• /
• v.18 no.1
• /
• pp.29-47
• /
• 2003

In order to investigate the distribution of dominant phytoplankton species in the coastal waters of Gori, Wolseong, Uljin and Younggwang, the standing crops of dominant species were studied during 1992-1996 and the relationships between standing crops and environmental variables were analyzed.The standing crops of diatom Skeletonema costatum, Thalassiosira decipiens, Chaetoceros debilis, Pseudo-nitzchia seriata, Paralia sulcata and dinoflgaellate Prorocentrum triestinum were on average from 16,373 to 118,549 cellso$l^{-1}$, from 11,180 to 210,313 cellso$l^{-1}$, from 23,341 to 55,889 cellso$l^{-1}$, from 6,784 to 15,766 cellso$l^{-1}$, from 342 to 41,596 cellso$l^{-1}$ and from 4,828 to 22,397 cellso$l^{-1}$ in the four study areas, respectively. The standing crops of Skeletonema costatum, Thalassiosira decipiens and Paralia sulcata were higher in Younggwang, while Chaetoceros debilis, Pseudo-nitzschia seriata and Prorocentrum triestinum were higher in Wolseong than other areas. The standing crops of silicoflgaellate Distephanus speculum were from 157 to 4,239 cellso$l^{-1}$ in the four study areas, showing an tendency increasing in Uljin. The abundance rates of Skeletonema costatum, Thalassiosira decipiens and Chaetoceros debilis were from 7.04 to 15.74%, from 6.95 to 33.69% and from 5.17 to 13.88% in the four study areas, respectivelyThe results of correlation coefficient between standing crops of dominant species and environmental variables show that phosphates were related with the distribution of dominant species in Gori, Uljin and Younggwang, while nitrogen compounds affected the distribution of dominant species in Wolseong. In addition, salinity and temperature affected the distribution of dominant species in Wolseong and Younggwang, respectively.

• Journal of Microbiology and Biotechnology
• /
• v.18 no.12
• /
• pp.1919-1926
• /
• 2008

Statistical experimental designs; involving (i) a fractional factorial design (FFD) and (ii) a central composite design (CCD) were applied to optimize the culture medium constituents for production of a unique antifreeze protein by the Antartic micro algae Chaetoceros neogracile. The results of the FFD suggested that NaCl, KCl, $MgCl_2$, and ${Na}_{2}{SiO}_{3}$ were significant variables that highly influenced the growth rate and biomass production. The optimum culture medium for the production of an antifreeze protein from C. neogracile was found to be Kalle's artificial seawater, pH of $7.0{\pm}0.5$, consisting of 28.566 g/l of NaCl, 3.887 g/l of $MgCl_2$, 1.787 g/l of $MgSO_4$, 1.308 g/l of $CaSO_4$, 0.832 g/l of ${K_2}{SO_4}$, 0.124 g/l of $CaCO_3$, 0.103 g/l of KBr, 0.0288 g/l of $SrSO_4$, and 0.0282 g/l of ${H_3}{BO_3}$. The antifreeze activity significantly increased after cells were treated with cold shock (at $-5^{\circ}C$) for 14 h. To the best of our knowledge, this is the first report demonstrating an antifreeze-like protein of C. neogracile.

• Journal of Life Science
• /
• v.14 no.4
• /
• pp.589-592
• /
• 2004

The growth response of the fish-killing dinoflagellate Cochlodinium polykrikoides was studied in cultures, using the treatment of Ceratium extracts by a methanol, a water-soluble, and a cell-free medium. The cell-free medium had the most increasing on the growth of C. polykrikoides cultures, enriched with $\geq$ 25% Ceratium, whereas the methanol and water-souble fractions did not affect the growth of C. polykrikoides exposed to even higher concentration. In particular, the cell-free medium also increased the growth of Gyrodinium impudicum and Chaetoceros sp., similar species to C. polykrikoides. In contrast to C. polykrikoides, G. impudicum and Chaetoceros sp., the growth of Alexandrium tamarense was inhibited significantly, and there was no great effect on the growth of Prorocentrum minimum. These results imply that Ceratium extracts may play an important role in the stimulatory effect of C. polykrikoides, and they have to affect the interaction between C. polykrikoides and Ceratium when co-existing.

• Journal of Aquaculture
• /
• v.12 no.1
• /
• pp.39-45
• /
• 1999

In order to obtain the basic biological data for artificial seedling production of sea cucumber, Stichopus japonicus, the influence of water temperature and air dry for spawning induction, egg development and larvae rearing was investigated during the period from April, 1995 through September, 1995. Spawning induction rate by the water temperature was 6.0~17.5% and air dry was responsed 1.4~4.0%. Number of eggs spawned of Stichopus japonicus were $50~500\times10^4$ individuals, the fertilization and hatching rate were ranged 84.0~96.0%, 71.4~84.6% respectively. The fertilized egg of Stichopus japonicus appeared mean diameter of $154{\mu}m$. At a constant water temperature of $23^{circ)C$, it become 4 tell stage from fertilization after 2 hours 10 minutes, hatching larvae after 14 hours half, auricularia larvae after 3 days, doliolaria larvare after 11 days and pentactula larvae after 15 days ready for settlement. The suitable food in the larvae reared for 17 days after fertilization were shown the best growth and survival in the larvae food of Chaetoceros calcitrans. Optimum density for larvae rearing were maintained of the larval density lower than 2 individuals/ml.

• The Sea:JOURNAL OF THE KOREAN SOCIETY OF OCEANOGRAPHY
• /
• v.5 no.4
• /
• pp.305-319
• /
• 2000

A total of 50 diatom species and 1 subspecies belonging to 31 genera except Chaetoceros resting spores were identified in the 45 sediments subsampled from a gravity core GH98-1223 collected from the western Hokkaido Island located in the northeastern East Sea (Sea of Japan). The most dominant species is Thalassionema nitzschioides (Grunow) Hustedt, ranging 29 to 59% of the total assemblages, and most species including Denticulopsis seminae (Simonsen and Kanaya) Simonsen and Pseudoeunotia doliolus (Wallich) Grunow were less than 5% in average. Frequencies of cold-water species are generally higher than those of warm-water species and the vertical distribution of cold-water species was largely opposite to that of warm-water species in spite of ecological habitat difference. Frequency of cold-water species, D. seminae is reverse to that of P. doliolus, an indicator of the Tsushima Warm Current, which is consistent with diatom temperature value (T$_{d}$ value). The variation of T$_{d}$ values shows that the upper part of core with greater-than-average T$_{d}$ values represents postglacial warming trend. These T$_{d}$ values clearly demonstrate that the study area located in the northern part of the East Sea is gradually influenced by Tsushima Warm Current. In addition, the zig-zag variation in the lower part reflects the unstable seawater for diatom habitat. Chaetoceros resting spores indicating productivity and upwelling was 5.3 to 40%, with maximum peak at 80 cm. Chaetoceros resting spores/Chaetoceros vegetative cells, an indicator of relative amounts of biogenic material in the sediments was high at the upper 80 cm level, corresponding to the change of T$_{d}$ values. On the basis of diatom assemblages, the northeastern part of East Sea has experienced the effects of Tsushima Warm Current during the postglacial period of Holocene, which is similar to the modem climatic environment. However, the variation of P. doliolus reflects that the intensity of Tsushima Warm Current has been oscillated in the East Sea.

• Journal of the Korea Academia-Industrial cooperation Society
• /
• v.16 no.10
• /
• pp.6567-6574
• /
• 2015

In order to estimate the characteristics of the growth and composition of phytoplankton according to the available nutrients, we added nitrate (0, 1, 5, 10, 20, 50, $100{\mu}M$) and phosphate (0, 0.1, 0.5, 1, 2, 5, $10{\mu}M$) to field samples in a eutrophic site (St. 1) and an oligotrophic site (St. 22) in 2010 as well as a eutrophic site (St. 1, 5), a mesotrophic site (St. 19), and an oligotrophic site (St. 22) in 2011 at Jinhae Bay, Korea. The phytoplankton growth in the areas with additional nitrates and phosphates on St. 1 were significantly different from the control (One-way ANOVA:P<0.01). The dominant species at St. 1 in 2010 were Heterocapsa triquetra and Pseudo-nitzchia spp., to which nitrate and phosphate were added, respectively. The dominant species at St. 22 in 2010 differed between treatment conditions as follows: nitrate treatment Chaetoceros spp. (${\leq}10{\mu}M$), Thalassiosira spp. ($20{\mu}M$), and Pseudo-nitzchia spp.(${\geq}50{\mu}M$) for nitrate treatment; Cylindrotheca spp. ($2{\mu}M$) and Pseudo-nitzchia spp. ($5{\mu}M$) for phosphate treatment. Phytoplankton growth in 2011 according to the added nutrient were significantly different with treatment concentrations (One-way ANOVA: P<0.01). Moreover, the beginning of exponential growth in phytoplanktons was different between the eutro-mesotrophic sites (St. 1, 5, and 19) and the oligotrophic sites (St. 22) on day 2 and day 6 respectively. This implies that phytoplankton growth in the low nutrient condition may be retarded. The dominant species at St. 1 were Eucampia spp. and Chaetoceros spp. in the low nutrient treatment compared to Skeletonema spp., and Thalassiosira spp in the high nutrient treatment. The dominant species at St. 5 and St. 19 were mostly Skeletonema spp. and Chaetoceros spp. However, the dominant species at St. 22 was Thalassiosira spp.. The results of this study showed that phytoplankton growth and composition were different in areas with different nutrient characteristics resulting from the additional nutrients. Therefore, the nutrients additional algal assay could be indirectly explained why the biomass and composition of phytoplankton in Jinhae Bay has shown spatial differences.