• Title/Summary/Keyword: Cell Extraction

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Quantitative Analysis of Bergenin in Astilbe rubra and Growth Inhibition Effect of Ethanol Extract on Hela Cells (노루오줌으로부터 Bergenin의 함량 분석 및 에탄올 추출물의 자궁경부암세포 성장 억제 효과)

  • Kim, A Hyeon;Nho, Jong Hyun;Woo, Kyeong Wan;Gang, Ju Eun;Sim, Mi Ok;Kim, Min Suk;Ham, Seong Ho;Cho, Hyun Woo
    • Korean Journal of Pharmacognosy
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    • v.49 no.1
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    • pp.47-54
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    • 2018
  • Astilbe rubra (AR) is a perennial, belongs to the Saxifragaceae family, it contains tannin and triterpene. AR has been used in republic korea to improve toxication, fever, pain and convulsion. Recently, number of natural products have been analyzed for potential pharmacological activities including anti-cancer, anti-obesity and anti-diabetic medication. Consequently, we investigated the growth inhibition effect of Astilbe rubra water extract (WAC), ethanol extract (EAC) and bergenin on Hela cell (human adenocarcinoma cell). From whole plant of A. rubra, bergenin was isolated by column chromatography and its structures were identified by $^1H$, $^{13}C$ NMR and IT TOF-ESI MS. High extraction efficiency of bergenin was shown at 0.95% under 60 min reflux extraction with 50% MeOH. The MTS assay showed that EAC (ethanol extract) treatment increased cell death in a dose-dependent manner. Moreover, EAC treatment on Hela cell increased apoptotic cell death and caspase-3 activity. Results suggest that EAC has growth inhibition effect on Hela cells, but not WAC and bergenin. $500{\mu}g/mL$ EAC treatment inhibited Hela cell at $60.2{\pm}1.5%$.

GIS Application Model for Spatial Simulation of Surface Runoff from a Small Watershed( II) (소유역 지표유출의 공간적 해석을 위한 지리정보시스템의 응용모형(II) - 격자 물수지 모형을 위한 GIS응용 모형 개발 -)

  • 김대식;정하우;김성준;최진용
    • Magazine of the Korean Society of Agricultural Engineers
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    • v.37 no.5
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    • pp.35-42
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    • 1995
  • his paper is to develop a GIS application model (GISCELWAB) for the spatial simulation of surface runoff from a small watershed. The model was constituted by three submodels : The input data extraction model (GISINDATA) which prepares cell-based input data automatically for a given watershed, the cell water balance model (CELWAB) which calculates the water balance for a cell and simulates surface runoff of watershed simultaneously by the interaction of cells, and the output data management model (GISOUTDISP) which visualize the results of temporal and spatial variation of surface runoff. The input data extraction model was developed to solve the time-consuming problems for the input-data preparation of distributed hydrologic model. The input data for CELWAB can be obtained by extracting ASCII data from a vector map. The output data management model was developed to convert the storage depth and discharge of cells into grid map. This model enables to visualize the spatial formulation process of watershed storage depth and surface runoff wholly with time increment.

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Cell Culture Microbioassay for the Water Pollution Monitoring (세포배양 생화학적 기법에 의한 수환경오염 평가)

  • 오승민;정규혁
    • Toxicological Research
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    • v.16 no.4
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    • pp.285-291
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    • 2000
  • So far, investigation of environmental pollution has been achieved in field study. This remains the most exhaustive approach, current dimensions of environmental researches and their inherent complexity require that relatively inexpensive and simple laboratory procedures are developed to make possible the screening of large numbers of sites and samples. At this point. microbioassay has been high-lighted. The purpose of this study is to evaluate the water pollution using microbioassay. Two microbioassay methods were optimized and validated for the sensitive and quantitative determination of total toxic effects in the water. EROD(Ethoxyresorufin-O-deethylase) microbioassay was focused to detect PARs, PCBs and dioxinlike components in the water and E-screen assay to xenoestrogens. The EROD microbioassay was executed in rat hepatoma cell line, H4IIE and E-screen assay in MCF7-BUS cell line. Kumho river was selected for this study. 5ι of river water was extracted using combined solid-phase extraction in static adsorption mode with soxhlet extraction. Pollutants adsorbed to the XAD-4 resin were recovered by elution with ethyl acetate and methylene chloride (1 : 9). Toxic effects of extracts were determined by EROD-microbioassay and E-screen assay. EROD activities of water samples were 7.24-72.24 ng/ι MEQ. The estrogenic effect of various water samples is quantitatively evaluated by EEQ. The EEQ of samples range from 0.05 to 6.07 ng-EEQ/ι. These results suggested that Kumho river was highly polluted with organic toxic chemicals.

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LVQ_Merge Clustering Algorithm for Cell Image Extraction (세포 영상 추출을 위한 LVQ_Merge 군집화 알고리즘)

  • Kwon, Hee Yong;Kim, Min Su;Choi, Kyung Wan;Kwack, Ho Jic;Yu, Suk Hyun
    • Journal of Korea Multimedia Society
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    • v.20 no.6
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    • pp.845-852
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    • 2017
  • In this paper, we propose a binarization algorithm using LVQ-Merge clustering method for fast and accurate extraction of cells from cell images. The proposed method clusters pixel data of a given image by using LVQ to remove noise and divides the result into two clusters by applying a hierarchical clustering algorithm to improve the accuracy of binarization. As a result, the execution speed is somewhat slower than that of the conventional LVQ or Otsu algorithm. However, the results of the binarization have very good quality and are almost identical to those judged by the human eye. Especially, the bigger and the more complex the image, the better the binarization quality. This suggests that the proposed method is a useful method for medical image processing field where high-resolution and huge medical images must be processed in real time. In addition, this method is possible to have many clusters instead of two cluster, so it can be used as a method to complement a hierarchical clustering algorithm.

Analysis of Phosphatidylinositol 3,4,5-Trisphosphates of PTEN Expression on Mammalian Cells

  • Jahan, Nusrat;Park, Taeseong;Kim, Young Hwan;Lee, Dongsun;Kim, Hackyoung;Noh, Kwangmo;Kim, Young Jun
    • Mass Spectrometry Letters
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    • v.4 no.3
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    • pp.41-46
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    • 2013
  • The goal of this study is to find an experimental condition which enables us to perform enzymatic studies on the cellular behavior of PTEN (phosphatase and tensine homolog) through identification of molecular species of phosphatidylinositol 3,4,5-trisphosphates and their quantitative analysis in a mammalian cell line using mass spectrometry. We initially exployed a two-step extraction process using HCl for extraction of phosphatidylinositol 3,4,5-trisphosphates from two mammalian cell lines and further analyzed the extracted phosphatidylinositol 3,4,5-trisphosphates using tandem mass spectrometry for the identification of them. We finally quantified the concentration of phosphatidylinositol 3,4,5-trisphosphates using internal standard calibration. From these observation, we found that HEK 293-T cells is a good model to examine the enzymatic behavior of PTEN in a cell, and the minimum amount of phosphatidylinositol 3,4,5-trisphosphates is more than 50 pmol for quantification in a mass spectrometer. These results suggest that the well-optimized experimental conditions are required for the investigation of the cellular PTEN in terms of the catalytic mechanism and further for the detailed identification of cellular substrates.

Comparisons of Linear Feature Extraction Methods (선형적 특징추출 방법의 특성 비교)

  • Oh, Sang-Hoon
    • The Journal of the Korea Contents Association
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    • v.9 no.4
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    • pp.121-130
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    • 2009
  • In this paper, feature extraction methods, which is one field of reducing dimensions of high-dimensional data, are empirically investigated. We selected the traditional PCA(Principal Component Analysis), ICA(Independent Component Analysis), NMF(Non-negative Matrix Factorization), and sNMF(Sparse NMF) for comparisons. ICA has a similar feature with the simple cell of V1. NMF implemented a "parts-based representation in the brain" and sNMF is a improved version of NMF. In order to visually investigate the extracted features, handwritten digits are handled. Also, the extracted features are used to train multi-layer perceptrons for recognition test. The characteristic of each feature extraction method will be useful when applying feature extraction methods to many real-world problems.

Detection of Mycobacterium bovis in the lymph node of tuberculin positive cattle by guanidium isothiocyanate/silica DNA extraction and polymerase chain reaction

  • Cho, Yun-Sang;Jung, Suk-Chan;Yoo, Han-Sang;Kim, Jong-Man
    • Korean Journal of Veterinary Service
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    • v.30 no.2
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    • pp.233-241
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    • 2007
  • Tuberculin positive cattle without gross tubercle lesions should be confirmed by the bacteriological examination to determine the state of the infection. To overcome the time-consuming and laborious identification by culture and biochemical tests, polymerase chain reaction (PCR) has been used to identify Mycobacterium bovis. Due to various lipids in the cell wall of Mycobacterium spp, novel methods of DNA extraction from Mycobacterium spp have been developed. In this study, a newly developed guanidium isothiocyanate/silica DNA extraction method was directly applied to specimens from the tuberculin positive cattle. DNAs were directly extracted from the lymph nodes and the major polymorphic tandem repeat (MPTR) and mycobacterial protein of BCG 70 (MPB70) were amplified using PCR. The DNA extraction method using guanidium isothiocyanate/silica was efficient and safe, and the MPTR and MPB70 primers were specific to M bovis. Therefore, MPTR and MPB70 PCRs will be useful for the detection of M bovis in the lymph node from skin-test positive cattle.

Anti-Corrosion Behaviour of Rebar in Cement Mortar by Electrochemical Chloride Extraction (전기화학적 염소 추출법에 의한 시멘트 모르터내의 철근 방식)

  • Nam Sang Cheol;Lim Young Chang;Cho Won-Il;Cho Byung Won;Chun Hai Soo;Yun Kyung Suk
    • Journal of the Korean Electrochemical Society
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    • v.3 no.1
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    • pp.31-38
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    • 2000
  • Anti-corrosion behaviour of rebar embedded in cement mortar containing chloride ions was investigated by electrochemical chloride extraction(ECE). $43\%$ of the initial chloride ions of the cement mortar was fixed to Friedel salts and the soluble chloride ions were successfully extracted by ECE method. Concentration profiles of the chloride ions were estimated by Fick's 2nd law with time and depth, and it was close to the real value. The corrosion potential increased to anodic direction after ECE test, and the corrosion of rebar was reduced as a result of AC impedance spectroscopy.

Scientific Analysis of the Formulation Theory of Chungpesagan-tang; In Vitro Cytotoxicity of Chungpesagan-tang

  • Kim, Jin-Don;Bae, Hyung-Sup;Joh, Ki-Ho;Kim, Young-Suk;Lee, Kyung-Sup;Park, Eun-Kyung;Bae, Eun-Ah;Kim, Dong-Hyun
    • Natural Product Sciences
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    • v.6 no.1
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    • pp.25-30
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    • 2000
  • To analyse scientifically the fundamental formulation theory and drug interaction of Chungpegagan-tang, the extraction level of puerarin and daidzin, the transforming activity of puerarin and daidzin to daidzein by human intestinal bacteria and in vitro cytotoxicity against tumor cell lines of Chungpesagan-tang were investigated. When Puerariae Radix was extracted with Chungpesagan-tang composing herbal medicines, the puerarin extraction level from these polyprescriptions was decreased by the extraction with Raphani Semen or Cimicifugae Rhizoma, but the other herbal medicines increased it. The activity transforming puerarin and daidzin to daidzein by human intestinal bacteria was increased by Raphani Semen, Cimicifugae Rhizoma and Angelicae Tenuissimae Radix, but decreased by Scutellariae Radix and Rhei Rhizoma. Puerariae Radix did not showed in vitro cytotoxicity against tumor cell lines. However, by its anaerobic incubation with human intestinal bacteria, it showed a potent cytotoxicity. When the main components, puerarin and daidzin, of Puerariae Radix were incubated with human intestinal bacteria, the main metabolites were daidzein and calycosin. These metabolites had the most potent cytotoxicity, compared to those of puerarin and daidzin. Raphani Semen, Rhei Rhizoma and Chungpesagan-tang had also the potent cytotoxicity against tumor cell lines by the anaerobic incubation with human intestinal bacteria.

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Improvement of protein extraction efficiency from defatted sesame meal with thermal and enzymatic treatments (열 처리와 효소 처리에 의한 탈지 참깨박 단백질의 추출율 향상)

  • In, Man-Jin
    • Journal of Applied Biological Chemistry
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    • v.63 no.4
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    • pp.291-295
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    • 2020
  • In order to increase the utilization of defatted sesame meal (DSM), a by-product of sesame oil production, the conditions of extraction of insoluble proteins from DSM by enzyme treatment were investigated. As a result of comparing the treatment results of proteolytic enzymes Alcalase, Flavorzyme, Neutrase, and Protamex with control, Protamex was effective in increasing the total solid and protein content. At the reaction conditions of Protamex (50 ℃, pH 6.0), the dosage of enzymes was appropriate for 1% of DSM and 3 h of enzyme reaction time. To improve the efficiency of enzymatic treatment, the protein content extracted increased as the heat treatment temperature increased, and slightly increased above 110 ℃. As a result of investigating the effect of the combination treatment of cell lytic enzyme (Tunicase) and protease (Protamex) on protein solubilization, it was most effective to treat the cell lytic enzyme after processing the protease. After heat treatment (110 ℃, 10 min), sequential treatment of Protamex and Tunicase increased the protein content by about 3.5 times (9.85→35.58 mg/mL) of the non-heated control and 2.2 times (15.83→35.58 mg/mL) of the heat treated control.