• Journal of Microbiology and Biotechnology
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• 제20권3호
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• pp.542-549
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• 2010

In the present study, overexpression, purification, and characterization of Aeropyrum pernix K1 chaperonin B in E. coli were investigated. The chaperonin $\beta$-subunit gene (ApCpnB, 1,665 bp ORF) from the hyperthermophilic archaeon A. pernix K1 was amplified by PCR and subcloned into vector pET21a. The constructed pET21a-ApCpnB (6.9 kb) was transformed into E. coli BL21 Codonplus (DE3). The transformant cell successfully expressed ApCpnB, and the expression of ApCpnB (61.2 kDa) was identified through analysis of the fractions by SDS-PAGE (14% gel). The recombinant ApCpnB was purified to higher than 94% by using heat-shock treatment at $90^{\circ}C$ for 20 min and fast protein liquid chromatography on a HiTrap Q column step. The purified ApCpnB showed ATPase activity and its activity was dependent on temperature. In the presence of ATP, ApCpnB effectively protected citrate synthase (CS) and alcohol dehydrogenase (ADH) from thermal aggregation and inactivation at $43^{\circ}$ and $50^{\circ}$, respectively. Specifically, the activity of malate dehydrogenase (MDH) at $85^{\circ}$ was greatly stabilized by the addition of ApCpnB and ATP. Coexpression of pro-carboxypeptidase B (pro-CPB) and ApCpnB in E. coli BL21 Codonplus (DE3) had a marked effect on the yield of pro-CPB as a soluble and active form, speculating that ApCpnB facilitates the correct folding of pro-CPB. These results suggest that ApCpnB has both foldase and holdase activities and can be used as a powerful molecular machinery for the production of recombinant proteins as soluble and active forms in E. coli.

• 대한화학회지
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• 제34권3호
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• pp.232-238
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• 1990

Zn의 생화학적 역할을 연구하기 위하여, 간단한 모델시스템을 설정하였다. 즉, Zn가 리간드인 $OH_2나 NH_3$와 배위결합을 이루거나 carboxypeptidase A (CPA)의 기질에 해당하는 펩티드의 O=C-와 배위결합을 할 때, 그 기하학적 구조 및 net atomic charge의 변화를 조사하였다. Double Zeta basis set를 사용한 ab initio HF-SCF 계산에 의하면, Zn는 이들 리간드의 O-H, N-H, O=C-를 매우 polar하게 만든다. 특히, 펩티드의 탄소는 친전자성이 매우 증가하여, nucleophile의 공격을 용이하게 받을 수 있을 것으로 예측되었다. 또한, CPA에서 Zn 주위에 있는 리간드의 분자배위 상태를 조사하기 위하여, CPA+glycyltyrosine complex에 관한 molecular mechanics방법을 적용하였다. 이 결과를 X-ray 결과와 비교하였을 때, Zn는 4배위 결합 이외에 물분자도 관여할 것으로 예측된다.

• 한국미생물·생명공학회지
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• 제29권1호
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• pp.50-55
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• 2001

B. subtilis cx1이 생산하는 박테리오신(BSCX1)을 부분 정제하고 특성을 규명하였다. BSCX1은 pH 안정성 실험에서 pH 2.5~9.5 구간에서도 안정되게 항균활성을 유지하였다. 각종 효소에 대한 안정성 실험에서는 protease, trypsin, proteinase K, 그리고 carboxypeptidase로 처리하였을 때는 완전히 항균활성이 사라졌고, $\alpha$-amylase, lipase, aminopeptidase는 항균활성에 영향을 미치지 못하였다. 이상의 결과로 본 항균물질이 단백질계열의 물질이며 당이나 지질 결합은 항균활성에 큰 영향을 미치지 않는 것으로 추정되었다. 그러나 열에는 불안정하여 $60^{\circ}C$이상에서는 15분 안에 완전히 그 항균활성을 상실하였으며 $50^{\circ}C$ 에서는 15분만에 역가의 50%가 실활 되었다. 이에 반하여 저온에서는 무척 안정하여 $-20^{\circ}C$와 $-70^{\circ}C$에서 수개월간 보관하여도 여전히 항균활성을 그대로 유지하였다. Tricin-SDS-PAGE를 통하여 BSCX1의 분자량은 약 9,500 dalton으로 확인되었ekl. BSCX1은 pH2.5에서 9.5에 이르는 넓은 pH 영역에서 그 활성을 유지하므로, 기존에 개발된 nisin이나 유산균 유래의 항균물질이 pH 안정성이 떨어진다는 단점을 보완할 수 있는 생물학적 식품보존제로서의 개발 가능성을 높이 시사하였다.

• Biotechnology and Bioprocess Engineering:BBE
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• 제6권4호
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• pp.244-251
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• 2001

Over half of all biologically active peptide and peptide hormones are $\alpha$-amidated at their C-terminus, which is essential for their full biological activities. Amidation is accomplished through the sequential reaction of the two enzymes encoded by the single bifunctional, peptidyl-glycine $\alpha$-amidating monooxygenase (PAM or an $\alpha$-amidating enzyme). PAM catalyze the forma - tion of a peptide amide from peptide precursors that include a C-terminal glycine, and requires copper molecular oxygen and ascorbate. PAM is the only enzyme that produces peptide amides in vivo. However various strategies utilizing PAM, carboxypeptidase-Y enzymes, and chemical syn-thesis have been developed for producing peptide amides in vitro. The growing need and impor-tance of peptide amide drugs has highlighted the necessity for a efficient in vitro amidating sys-tem for industrial application for the production of peptide hormones, like calcitonin and oxytocin. This review presents the current situation regarding amidation with a special emphasis on the in-dustrial production or peptide hormones.

• Applied Biological Chemistry
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• 제16권3호
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• pp.112-117
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• 1973

The very low density apolipoproteins were separated by a newly developed method of isoelectric focusing in a narrow pH gradient. Four polypeptides were isolated that differed from the major proteins of the high density or low density lipoproteins. Three of these proteins had indistinguishable amino acid compositions, but different isoelectric points, COOH-terminal alanine, no isoleucine, cysteine or cystine. Two of these polypeptides had $NH_2-terminal$ serine. The polymorphism of apolipoprotein-Ala, so designated from the COOH-terminal residue, was related to sialic acid content; one form contained 2 moles of sialic acid per mole of protein, the second, 1 mole of protein, and the third, no sialic acid. The fourth polypeptide had an amino acid composition different from the first three polypeptides and from other polypetides obtained from very low density lipoprotein. This polypeptide had $NH_2-terminal$ threonine, COOH-terminal resistant to carboxypeptidase A, no histidine, cysteine, cystine or sialic acid. These four polypeptides constituted approx. 40% of the total protein in very low density lipoprotein.

• Journal of Microbiology and Biotechnology
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• 제2권1호
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• pp.1-6
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• 1992

The aspartame, $\alpha$-L-aspartyl-L-phenylalanine methylester, is an artificial sweetener. Taking advantage of the fact that the aspartame is a derivative of dipeptide, synthesis of aspartame from the artificial polypeptide made by an artificial gene has been attempted. The artificial polypeptide (LAP32), a polymer of tripeptide (aspartyl-phenylalanyl-lysine), was purified from the E. coli cells harboring a recombinant plasmid containing the artificial gene. This polypeptide was then digested with trypsin and carboxypeptidase B to produce dipeptide (Asp-Phe). Using the esterase activity of $\alpha$-chymotrypsin, the dipeptide was directly converted into Asp-Phe methylester in a water-methanol system. When the methanol concentration in reaction mixture was 25%, 50% of dipeptide was converted to the dipeptide methylester without producing any by-products.

• Journal of Microbiology and Biotechnology
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• 제19권6호
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• pp.542-546
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• 2009

Leaves are the major biomass-producing organs in herbaceous plants and mainly develop during vegetative stage by activities of shoot apical meristem. There is a strong correlation between leaf number and bolting, a characteristic phenotype during the transition to reproductive phase in Arabidopsis thaliana. In order to study interactions between leaf number and bolting, we isolated a Landsberg erecta-derived mutant named multifolial (mfo1) that produces increased number of leaves and bolts at the same time as the wild type. Through positional cloning and allelism test, mfo1 was found to be an allele of a previously reported mutant, altered meristem program1-1 (amp1-1) that is defective in a glutamate carboxypeptidase and bolts earlier than its wild type, Columbia ecotype, with the increased number of leaves. The bolting time differences between mfo1 and amp1, despite the same phenotype of many leaves, suggest the existence of genetic factor(s) differently function in each ecotype in the presence of mfo1/amp1 mutation.

• Journal of Dairy Science and Biotechnology
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• 제40권2호
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• pp.86-91
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• 2022

Chryseobacterium mulctrae KACC 21234^T is a novel species isolated from raw bovine milk. Psychrotrophic bacteria are considered contaminants and are hypothesized to originate from the environment. In this investigation, the C. mulctrae KACC 21234^T genome was determined to be 4,868,651 bp long and assembled into four contigs with a G+C ratio of 33.8%. In silico genomic analyses revealed the presence of genes encoding proteases (endopeptidase Clp, oligopeptidase b, carboxypeptidase) and lipases (phospholipase A(2), phospholipase C, acylglycerol lipase) that can catalyze the degradation of the proteins and lipids in milk, causing its quality to deteriorate. Additionally, antimicrobial resistance and putative bacteriocin genes were detected, potentially intensifying the pathogenicity of the strain. The genomic evidence presented highlights the need for improved screening protocols to minimize the potential contamination of milk by proteolytic and lipolytic psychrotrophic bacteria.

• Applied Biological Chemistry
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• 제39권1호
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• pp.9-15
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• 1996

쌀을 원료로 하는 청주 양조에 있어서, 원료의 이용률을 높이고 현대인의 기호에 맞는 청주를 얻기 위하여 국(麴)의 이용상의 차이를 비교하였고, 발효주의 술덧에서 분리한 효모균주에 대하여 발효특성을 검토하였다. 백국균(Aspergillus usamii mut. shirousami)을 배양한 밀기울국은 황국균(Aspergillus oryzae)을 배양한 쌀국에 비하여 glucoamylase, ${\alpha}-amylase$ 및 산성 protease 활성이 모두 높은 반면, 산성 carboxypeptidase 활성은 오히려 낮았다. 양조시험에 있어서 밀기울국(추출하여 사용함)은 소량으로도 술덧(주료)의 당화 및 발효를 효과적으로 진행시킬 수 있었으며, 숙성 술덧은 국취가 적고 아미노산도가 낮아 주질이 깨끗하였다. 또 밀기울국을 사용하고 분리효모로 발효시킨 청주는 일본청주효모 K-7 및 K-9의 경우에 비하여 유기산 특히 호박산의 양이 적어 주질면에서 보다 좋았다. 한편 밀기울국과 쌀국을 병용(倂用)하고 분리효모로 발효시킨 경우에는 밀기울국과 쌀국의 사용량에 따라 술덧의 아미노산도를 어느 정도 조정할 수 있었다. 그러나 쌀국을 사용하고, 분리효모로 발효시킨 경우에는 술덧의 에탄을 발효가 늦고 산 생성량이 많아 부적합하였다.

• Asian-Australasian Journal of Animal Sciences
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• 제24권2호
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• pp.198-205
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• 2011

This study was conducted to investigate the effect of feed types on Ochratoxin A (OTA) degradation by Korean native goats. Rumen fluid from canulated goats fed whole roughage or 50% roughage served as a source of micro-organisms. Experiments were undertaken i) to investigate OTA degradation ability in a $2{\times}4$ factorial arrangement with different feed types (100% roughage vs. 50% roughage) and rumen fluid fractions (whole rumen fluid, cells, autoclaved rumen fluid and supernatant) supplemented with OTA ii) to evaluate OTA degradation by the rumen fluid of goats fed two different diets at different time points (0, 3, 6, 9 and 12 h) of feeding iii) to isolate potential rumen microorganisms and iv) to identify elements responsible for OTA degradation. Rumen fluid from goats fed 100% roughage had higher (p<0.05) OTA degradability than 50% roughage diets. OTA degradation based on rumen fluid collection times showed that rumen fluid at 0 h showed significantly higher (p<0.05) degradability. Carboxypeptidase A (CPA) enzyme has been reported to be responsible for OTA degradation. Thus, using real time PCR, primers designed to target the CPA gene from Bacillus licheniformis could be amplified using genomic DNA from rumen fluid of goats and sequenced, thus enabling evaluation of the Bacillus population under different feeding condition and times. Our findings showed that the Bacillus population was significantly higher (p<0.05) before feeding (0 h) in animals which were fed a whole roughage diet, giving indirect evidence of OTA degradation being influenced by Bacillus sps. Thus, it can be concluded that OTA degradability is influenced by feed, feeding time and Bacillus licheniformis population.