• Title/Summary/Keyword: CUDA Parallel Processing

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Accelerating Group Fusion for Ligand-Based Virtual Screening on Multi-core and Many-core Platforms

  • Mohd-Hilmi, Mohd-Norhadri;Al-Laila, Marwah Haitham;Hassain Malim, Nurul Hashimah Ahamed
    • Journal of Information Processing Systems
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    • v.12 no.4
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    • pp.724-740
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    • 2016
  • The performance issues of screening large database compounds and multiple query compounds in virtual screening highlight a common concern in Chemoinformatics applications. This study investigates these problems by choosing group fusion as a pilot model and presents efficient parallel solutions in parallel platforms, specifically, the multi-core architecture of CPU and many-core architecture of graphical processing unit (GPU). A study of sequential group fusion and a proposed design of parallel CUDA group fusion are presented in this paper. The design involves solving two important stages of group fusion, namely, similarity search and fusion (MAX rule), while addressing embarrassingly parallel and parallel reduction models. The sequential, optimized sequential and parallel OpenMP of group fusion were implemented and evaluated. The outcome of the analysis from these three different design approaches influenced the design of parallel CUDA version in order to optimize and achieve high computation intensity. The proposed parallel CUDA performed better than sequential and parallel OpenMP in terms of both execution time and speedup. The parallel CUDA was 5-10x faster than sequential and parallel OpenMP as both similarity search and fusion MAX stages had been CUDA-optimized.

A Road Region Extraction Using OpenCV CUDA To Advance The Processing Speed (처리 속도 향상을 위해 OpenCV CUDA를 활용한 도로 영역 검출)

  • Lee, Tae-Hee;Hwang, Bo-Hyun;Yun, Jong-Ho;Choi, Myung-Ryul
    • Journal of Digital Convergence
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    • v.12 no.6
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    • pp.231-236
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    • 2014
  • In this paper, we propose a processing speed improvement by adding a parallel processing based on device(graphic card) into a road region extraction by host(PC) based serial processing. The OpenCV CUDA supports the many functions of parallel processing method by interworking a conventional OpenCV with CUDA. Also, when interworking the OpenCV and CUDA, OpenCV functions completed a configuration are optimized the User's device(Graphic Card) specifications. Thus, OpenCV CUDA usage provides an algorithm verification and easiness of simulation result deduction. The proposed method is verified that the proposed method has a about 3.09 times faster processing speed than a conventional method by using OpenCV CUDA and graphic card of NVIDIA GeForce GTX 560 Ti model through experimentation.

Parallel Algorithm for Spatial Data Mining Using CUDA

  • Oh, Byoung-Woo
    • Journal of Advanced Information Technology and Convergence
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    • v.9 no.2
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    • pp.89-97
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    • 2019
  • Recently, there is an increasing demand for applications utilizing maps and locations such as autonomous vehicles and location-based services. Since these applications are developed based on spatial data, interest in spatial data processing is increasing and various studies are being conducted. In this paper, I propose a parallel mining algorithm using the CUDA library to efficiently analyze large spatial data. Spatial data includes both geometric (spatial) and non-spatial (aspatial) attributes. The proposed parallel spatial data mining algorithm analyzes both the geometric and non-spatial relationships between two layers. The experiment was performed on graphics cards containing CUDA cores based on TIGER/Line data, which is the actual spatial data for the US census. Experimental results show that the proposed parallel algorithm using CUDA greatly improves spatial data mining performance.

Implementation of Particle Swarm Optimization Method Using CUDA (CUDA를 이용한 Particle Swarm Optimization 구현)

  • Kim, Jo-Hwan;Kim, Eun-Su;Kim, Jong-Wook
    • The Transactions of The Korean Institute of Electrical Engineers
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    • v.58 no.5
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    • pp.1019-1024
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    • 2009
  • In this paper, particle swarm optimization(PSO) is newly implemented by CUDA(Compute Unified Device Architecture) and is applied to function optimization with several benchmark functions. CUDA is not CPU but GPU(Graphic Processing Unit) that resolves complex computing problems using parallel processing capacities. In addition, CUDA helps one to develop GPU softwares conveniently. Compared with the optimization result of PSO executed on a general CPU, CUDA saves about 38% of PSO running time as average, which implies that CUDA is a promising frame for real-time optimization and control.

Frequency Hopping Signal Analysis Using High-Speed Parallel Processing (고속 병렬처리 기법을 활용한 주파수 도약 신호 분석)

  • Lee, Kwang-Yong;Yoon, Hyun-Chul;Lee, Hyeon-Hwi
    • The Journal of Korean Institute of Electromagnetic Engineering and Science
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    • v.25 no.2
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    • pp.251-254
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    • 2014
  • In this paper, we studied a technique of extracting a Frequency Hopping(FH) signal for analysis using high-speed parallel processing structure. Unlike fixed frequency signal, FH signal is difficult to detect and analyze because FH systems use many random frequencies instead of a single carrier frequency. To solve this problem we designed a method that analyze FH signal using high-speed parallel processing. In order to apply parallel processing, we use CUDA using GPU and compare single processing with prarallel processing. As a result, using CUDA on a GPU is about 8.53 times faster than single processing.

The Design of Parallel Processing S/W Using CUDA for Realtime 3D Laser Ladar Imaging System (실시간 3차원 레이저 레이더 영상 생성을 위한 CUDA 기반 병렬처리 소프트웨어 설계)

  • Cho, Yong Il;Ha, Choong Lim;Yang, Ji Hyeon;Kim, Jae Hyup
    • Journal of the Korea Society of Computer and Information
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    • v.18 no.1
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    • pp.1-10
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    • 2013
  • In this paper, we propose a CUDA(Common Unified Device Architecture) based SW(software) design method for CPU(Central Processing Unit) and GPU(Graphic Processing Unit) parallel structure to implement real-time process in 3D Laser ladar(LADAR) imaging system. LADAR is a complex system to generate 3-dimensional image based on the laser ranging information, and requires massive process resources in each phase. Therefore, designing and implementing parallel structure are crucial to realize a real-time process within limited system resource. As a conclusion, we can meet the speed of required real-time process allocating separable work load to CUDA GPU by analyzing process algorithm in each phase and confirm the process speed increase by 46%.

The Implementation of Fast Object Recognition Using Parallel Processing on CPU and GPU (CPU와 GPU의 병렬 처리를 이용한 고속 물체 인식 알고리즘 구현)

  • Kim, Jun-Chul;Jung, Young-Han;Park, Eun-Soo;Cui, Xue-Nan;Kim, Hak-Il;Huh, Uk-Youl
    • Journal of Institute of Control, Robotics and Systems
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    • v.15 no.5
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    • pp.488-495
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    • 2009
  • This paper presents a fast feature extraction method for autonomous mobile robots utilizing parallel processing and based on OpenMP, SSE (Streaming SIMD Extension) and CUDA programming. In the first step on CPU version, the algorithms and codes are optimized and then implemented by parallel processing. The parallel algorithms are debugged to maintain the same level of performance and the process for extracting key points and obtaining dominant orientation with respect to key points is parallelized. After extraction, a parallel descriptor via SSE instructions is constructed. And the GPU version also implemented by parallel processing using CUDA based on the SIFT. The GPU-Parallel descriptor achieves an acceleration up to five times compared with the CPU-Parallel descriptor, but it shows the lower performance than CPU version. CPU version also speed-up the four and half times compared with the original SIFT while maintaining robust performance.

Performance Study of Satellite Image Processing on Graphics Processors Unit Using CUDA

  • Jeong, In-Kyu;Hong, Min-Gee;Hahn, Kwang-Soo;Choi, Joonsoo;Kim, Choen
    • Korean Journal of Remote Sensing
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    • v.28 no.6
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    • pp.683-691
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    • 2012
  • High resolution satellite images are now widely used for a variety of mapping applications including photogrammetry, GIS data acquisition and visualization. As the spectral and spatial data size of satellite images increases, a greater processing power is needed to process the images. The solution of these problems is parallel systems. Parallel processing techniques have been developed for improving the performance of image processing along with the development of the computational power. However, conventional CPU-based parallel computing is often not good enough for the demand for computational speed to process the images. The GPU is a good candidate to achieve this goal. Recently GPUs are used in the field of highly complex processing including many loop operations such as mathematical transforms, ray tracing. In this study we proposed a technique for parallel processing of high resolution satellite images using GPU. We implemented a spectral radiometric processing algorithm on Landsat-7 ETM+ imagery using CUDA, a parallel computing architecture developed by NVIDIA for GPU. Also performance of the algorithm on GPU and CPU is compared.

A Parallel Processing of Finding Neighbor Agents in Flocking Behaviors Using GPU (GPU를 이용한 무리 짓기에서 이웃 에이전트 찾기의 병렬 처리)

  • Lee, Jae-Moon
    • Journal of Korea Game Society
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    • v.10 no.5
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    • pp.95-102
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    • 2010
  • This paper proposes a parallel algorithm of the flocking behaviors using GPU. To do this, we used CUDA as the parallel processing architecture of GPU and then analyzed its characteristics and constraints. Based on them, the paper improved the performance by parallelizing to find the neighbors for an agent which requires the largest cost in the flocking behaviors. We implemented the proposed algorithm on GTX 285 GPU and compared experimentally its performance with the original spatial partitioning method. The results of the comparison showed that the proposed algorithm outperformed the original method up to 9 times with respect to the execution time.

Real-Time Object Segmentation in Image Sequences (연속 영상 기반 실시간 객체 분할)

  • Kang, Eui-Seon;Yoo, Seung-Hun
    • The KIPS Transactions:PartB
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    • v.18B no.4
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    • pp.173-180
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    • 2011
  • This paper shows an approach for real-time object segmentation on GPU (Graphics Processing Unit) using CUDA (Compute Unified Device Architecture). Recently, many applications that is monitoring system, motion analysis, object tracking or etc require real-time processing. It is not suitable for object segmentation to procedure real-time in CPU. NVIDIA provide CUDA platform for Parallel Processing for General Computation to upgrade limit of Hardware Graphic. In this paper, we use adaptive Gaussian Mixture Background Modeling in the step of object extraction and CCL(Connected Component Labeling) for classification. The speed of GPU and CPU is compared and evaluated with implementation in Core2 Quad processor with 2.4GHz.The GPU version achieved a speedup of 3x-4x over the CPU version.