• 한국컴퓨터정보학회논문지
• /
• 제21권5호
• /
• pp.135-139
• /
• 2016

Scrophularia ningpoensis hemsl has been traditionally used in China and Vietnam for treatment of bacteria, atopy, pimple, tonsillitis, angina and encephalitis for a long time. The main objectives of this study were to evaluate the antibacterial activity of the Scrophularia ningpoensis hemsl extract on biofilm formation of Klebsiella pneumoniae. Antibacterial activity was conducted using disc diffusion assay and minimum inhibitory concentration (MIC), and minimum bactericidal concentration (MBC) were determined using the broth micro dilution method in accordance to Clinical and Laboratory Standards Institute guidelines(CLSI). Furthermore, cytotoxicity on L929 were assessed using animal cell culture for the proliferation test(MTT cell assay) and the biofilm forming capacity of the K. pneumoniae were determined using the colony forming unit (CFU) assay. The extract exhibited considerable antibacterial activity. K. pneumoniae was susceptible to the extract with the MIC and MBC of 0.1875 and $1.5mg/m{\ell}$ respectively. Cytoxicity test in L929 showed no sign of toxicity at the concentration of $0.75mg/m{\ell}$ and at the same concentration the extract caused inhibition of bacterial biofilm formation. The extract of Scrophularia ningpoensis hemsl possesses an in vitro antibacterial antibiofilm activities against K. pneumoniae, with no sign of cytoxicity on L929.

• Journal of Microbiology and Biotechnology
• /
• 제17권3호
• /
• pp.516-519
• /
• 2007

Enterobacter sakazakii is an emerging food pathogen, which induces severe meningitis and sepsis in neonates and infants, with a high fatality rate. The disease is generally associated with the ingestion of contaminated infant formula. In this study, we describe the development of a real-time PCR protocol to identify E. sakazakii using a TaqMan probe, predicated on the nucleotide sequence data of the 168 rRNA gene obtained from a variety of pathogens. To detect E. sakazakii, four primer sets and one probe were designed. Five strains of E. sakazakii and 28 non-E. sakazakii bacterial strains were used in order to ensure the accuracy of detection. The PCR protocol successfully identified all of the E. sakazakii strains, whereas the 28 non-E. sakazakii strains were not detected by this method. The detection limits of this method for E. sakazakii cells and purified genomic DNA were 2.3 CFU/ assay and 100 fg/assay, respectively. These findings suggest that our newly developed TaqMan real-time PCR method should prove to be a rapid, sensitive, and quantitative method for the detection of E. sakazakii.

• 한국축산식품학회지
• /
• 제40권2호
• /
• pp.297-310
• /
• 2020

This study aims to evaluate the probiotic properties of Lactobacillus brevis (L. brevis) KU200019 and the synergistic activity with prebiotics on antimicrobial activity, and the potential application as an adjunct culture in fermented dairy products. The commercial strain, L. brevis ATCC 14869 was used as reference strain. L. brevis KU200019 was showed higher viability in simulated gastric (99.38±0.21%) and bile (115.10±0.13%) conditions compared to reference strain. L. brevis KU200019 exhibited antimicrobial activity against various foodborne pathogens. The supplementation of fructooligosaccharides (FOS) enhanced viability of lactic acid bacteria (>8 Log CFU/mL) and antioxidant activity [2,2-diphenyl-2-picrylhydrazyl radical assay (DPPH) assay, 31.23±1.14%; 2,2-azinobis (3-ethylbenzothiazoline-6-sulfonic acid (ABTS) assay, 38.82±1.46%] in fermented skim milk during refrigerated storage. L. brevis KU200019 was distinguished from the reference strain by its higher probiotic potential, antimicrobial activity, and higher antioxidant activity in fermented milk. Therefore, L. brevis KU200019 with FOS was demonstrated promising properties for further application in fermented dairy products with enhanced safety and quality.

• Journal of Microbiology and Biotechnology
• /
• 제29권10호
• /
• pp.1543-1552
• /
• 2019

Salmonella is a common zoonotic and foodborne pathogen that causes high morbidity and mortality in developing countries. In this study, we established and validated a polymerase spiral reaction (PSR) assay which targeted the conserved invasion gene (invA) of Salmonella by SYBR Green I indicator methods. Subsequently, assays for determination of the optimal conditions for optimal specificity and sensitivity of PSR were performed. We performed comprehensive evaluations using loop-mediated isothermal amplification (LAMP) and real-time PCR. A total number of 532 samples of daily food were analyzed by PSR. Twenty-seven bacterial strains were tested in the specificity assay, from which positive results were obtained only for 14-Salmonella strains. However, none of the 13 non-Salmonella strains was amplified. Similarly with LAMP and real-time PCR, the detection limit of the PSR assay was 50 CFU/ml. The PSR method was also successfully applied to evaluate the contamination with Salmonella in 532 samples of daily food, corroborating traditional culture method data. The novel PSR method is simple, sensitive, and rapid and provides new insights into the prevention and detection of foodborne diseases.

• 한국식품영양학회지
• /
• 제26권4호
• /
• pp.936-944
• /
• 2013

Cronobacter muytjensii는 유아용 조제분유(IFP)의 잠재적 위험요인으로 중요한 식품 기인성 병원균이다. 이 연구에서는 C. muytjensii 검지를 위한 특이적 면역글로불린 G(IgG)를 개발하고, 이 anti-C. muytjensii IgG를 이용하여 간접 비경쟁 효소면역측정법(INC-ELISA)을 개발하였다. 그 결과, 새롭게 개발한 INC-ELISA 방법은 C. muytjensii에 매우 민감하고, 순수배양 시 $6.5{\times}10^3CFU/ml$의 검출한계와 유아용 조제분유에서 1 cell/25 g의 검출한계를 나타내었다. INC-ELISA 방법은 또한 C. muytjensii에 탁월한 특이성을 보이고, Cronobacter 속 외 11종의 다른 식품 기인성 병원균 계통과의 교차반응을 보이지 않았다. 이러한 결과는, 개발된 INC-ELISA 방법이 C. muytjensii에 매우 민감하고 효율적이며, 신속하고 용이한 검출을 위한 진단 키트 개발에 적용할 수 있음을 시사한다.

• The Plant Pathology Journal
• /
• 제34권2호
• /
• pp.104-112
• /
• 2018

Accurate and rapid detection of bacterial plant pathogen is the first step toward disease management and prevention of pathogen spread. Bacterial plant pathogens Clavibacter michiganensis subsp. nebraskensis (Cmn), Pantoea stewartii subsp. stewartii (Pss), and Rathayibacter tritici (Rt) cause Goss's bacterial wilt and blight of maize, Stewart's wilt of maize and spike blight of wheat and barley, respectively. The bacterial diseases are not globally distributed and not present in Korea. This study adopted comparative genomics approach and aimed to develop specific primer pairs to detect these three bacterial pathogens. Genome comparison among target pathogens and their closely related bacterial species generated 15-20 candidate primer pairs per bacterial pathogen. The primer pairs were assessed by a conventional PCR for specificity against 33 species of Clavibacter, Pantoea, Rathayibacter, Pectobacterium, Curtobacterium. The investigation for specificity and sensitivity of the primer pairs allowed final selection of one or two primer pairs per bacterial pathogens. In our assay condition, a detection limit of Pss and Cmn was $2pg/{\mu}l$ of genomic DNA per PCR reaction, while the detection limit for Rt primers was higher. The selected primers could also detect bacterial cells up to $8.8{\times}10^3cfu$ to $7.84{\times}10^4cfu$ per gram of grain seeds artificially infected with corresponding bacterial pathogens. The primer pairs and PCR assay developed in this study provide an accurate and rapid detection method for three bacterial pathogens of grains, which can be used to investigate bacteria contamination in grain seeds and to ultimately prevent pathogen dissemination over countries.

• 한국식품영양과학회지
• /
• 제39권4호
• /
• pp.595-601
• /
• 2010

본 연구는 국내 주요 식중독 원인균인 Staphylococcus aureus, Salmonella enterica subsp., Vibrio parahaemolyticus를 동시에 검출 및 동정할 수 있는 simultaneous multiplex PCR방법을 개발하고자 하였다. S. aureus의 23s rRNA 유전자(482 bp), V. Parahaemolyticus의 toxR 유전자(368 bp), S. enterica subsp.의 invA 유전자(284 bp)를 특이적으로 검출 및 동정할 수 있는 3개 primer set 즉, STA-5F/STA-5R, ToxR-F/ToxR-R, 139/141을 구축하였으며, 그 결과 정제되어진 각 식중독 원인균의 genomic DNA를 template로 하여 세 균주 모두 10 pg까지 다중동시검출이 가능하였다. 생균수(CFU)와 상응되는 검출한계 결과로써 $10^1\sim10^2$ CFU/reaction의 검출한계를 보였으며 이는 즉, S. aureus $6.0\times10^4$ CFU/mL, S. enterica subsp. $9.5\times10^4$ CFU/mL, V. parahaemolyticus $6.1\times10^5$ CFU/mL의 검출한계를 나타내었다. 균체회수부터 agarose gel 상에서 검출 및 동정까지 3~4 hr의 시간 소요로 single tube 반응으로 세 식중독 원인균의 다중동시검출이 가능하였다. 또한 추가적인 연구를 통하여 세 식중독 원인균주의 검출을 위한 향상된 민감도를 가지는 multiplex PCR법 및 real time PCR을 이용한 다중동시검출법 개발을 위한 기초자료로서 활용 가능할 것이라 사료된다.

• 한국식품과학회지
• /
• 제40권5호
• /
• pp.562-567
• /
• 2008

짚에서 60균주를 분리하여 생균제제로서의 기능이 있는 청국장 제조용 starter로 사용가능성을 조사하였다. 분리한 60균주 중 단백 분해력, 전분 분해력, 대두 분해력을 나타낸 균주는 B-59 등 8균주 이었으며 모두 그람 양성 간균으로 포자를 형성하였다. 선별된 8균주의 Staphylococcus aureus, Listeria monocytogenes, Shigella sonni, Pseudomonas fluorescens, Vibrio parahaemolyticus에 대해 항균활성을 나타낸 균주는 B-59이었다. 항균활성을 나타낸 분리균주 B-59에 의해 L. monocytogenes, S. aureus, V. parahaemolyticus, P. fluorescens의 성장은 억제되었으며. API 50CHB kit를 이용하여 동정한 결과 99.0%의 유사율로 Bacillus licheniformis로 간이 동정되었다. 분리균주인 B-59는 pH 2.5로 조정된 인공 위액에 초기 생균수 8.33 CFU/mL에서 $37^{circ}C$에서 3시간 배양 후의 6.91 CFU/mL로 높은 생존율을 나타내었으며, 인공담즙산에서 초기 균수 6.90 CFU/mL에서, 배양 24시간 후 8.24 CFU/mL로 증가하여 내성을 나타내었다. 분리균주인 B-59는 NaCl 0, 2, 4% 농도에서는 각각 7.63, 7.70, 7.67 CFU/mL로 성장에 영향을 미치지 않았으나, 32% 농도에서도 생존하여 NaCl에 대한 내성을 나타내었으며, 알코올농도 32%에서도 4.22 CFU/mL를 나타내어 에탄올에 대한 내성을 나타내었다. DPPH radical 소거능으로 측정한 B-59 배양액의 항산화 활성이 균주의 성장에 따라 증가하였다.

• 한국식품과학회지
• /
• 제52권1호
• /
• pp.103-108
• /
• 2020

본 연구는 식품에서 문제가 되는 시가독소생성 대장균(STEC)을 박테리오파지 증폭 기법을 통해 검출하고자 시가독소 생성 대장균에 대한 박테리오파지를 분리하였고 분리된 4종의 파지와 기 분리된 2종의 박테리오파지를 혼합하여 사용하였다. 분리된 박테리오파지는 형태학적 특성 및 제한효소 절단 패턴 등을 통해서 동정하였다. 5종의 파지는 E. coli O157:H7 및 non-O157 시가독소 생성 대장균을 모두 저해하는 특징을 가지는 것으로 나타났다. 박테리오파지 증폭 기법에서 중요한 단계인 세균에 감염되지 않은 박테리오파지를 제거하기 위해 10% (v/v) ferrous ammonium sulfate (FAS)을 사용하였으며 약 7-9 log PFU/mL 수준의 박테리오파지를 10분 내로 제거하는 것을 확인하였다. 시가독소 생성 대장균인 E. coli NCCP 13937을 검출하기 위해서는 약 6 log PFU/mL 이상의 박테리오파지 혼합액의 농도 및 약 4-5 log CFU/mL 이상의 목표 균주가 필요한 것으로 나타났다. 이러한 조건을 바탕으로 실제 판매되고 있는 신선식품에서 시가독소생성 대장균을 검출한 결과, 5시간 이내에 증폭된 약 2-3 log PFU/mL의 plaque를 통해 검출이 가능한 것을 확인하였다. 따라서 본 연구를 통해 박테리오파지 혼합액을 이용한 증폭 기법을 통해 시가독소 생성 대장균의 오염 여부를 보다 효율적으로 확인할 수 있음을 보여주었고 이를 적용한 제품을 개발하여 검출 단계의 간편화가 가능할 것으로 판단된다.

• 한국동물위생학회지
• /
• 제38권1호
• /
• pp.37-42
• /
• 2015

The aim of the present study was to compare the non-invasive methods for the diagnosis of H. felis with HpSA kit-based detection method and H. felis-specific PCR assay with dog's stool samples without sacrifice. Male Beagle dogs (n=6) were infected with H. felis ATCC 49179 ($1.0{\times}10^9CFU/dog$) by intra-gastric inoculation two times at 3-day intervals, and the stool specimens of dogs were collected 1, 3, 5, 7, 14, 21 days after infection to submit to HpSA test and H. felis-specific PCR. As the results, the sensitivity of the HpSA and the PCR analysis was 50.0%, 83.3% respectively. Although HpSA test is less sensitive, it could be used for rapid, cheap and easy screening assay for H. felis infection in dog and cats. We suggest that the H. pylori stool antigen kit, HpSA, is useful and effective for monitoring H. felis infection. If HpSA test would be made with H. felis antibodies in the future, its sensitivity could be increased. Also, PCR assay could be successfully used to detect the H. felis in stools. Applying the H. pylori stool antigen kit and PCR assay may be the recommended non-invasive strategy to identify H. felis in dog and cats.