• 제목/요약/키워드: CCA analysis

검색결과 198건 처리시간 0.031초

Higher-order solutions for generalized canonical correlation analysis

  • Kang, Hyuncheol
    • Communications for Statistical Applications and Methods
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    • 제26권3호
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    • pp.305-313
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    • 2019
  • Generalized canonical correlation analysis (GCCA) extends the canonical correlation analysis (CCA) to the case of more than two sets of variables and there have been many studies on how two-set canonical solutions can be generalized. In this paper, we derive certain stationary equations which can lead the higher-order solutions of several GCCA methods and suggest a type of iterative procedure to obtain the canonical coefficients. In addition, with some numerical examples we present the methods for graphical display, which are useful to interpret the GCCA results obtained.

Identification of Association between Supply of Pork and Production of Meat Products in Korea by Canonical Correlation Analysis

  • Kim, Tae Wan;Kim, Chul Wook;Noh, Chi Won;Kim, Sam Woong;Kim, Il-Suk
    • 한국축산식품학회지
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    • 제38권4호
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    • pp.794-805
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    • 2018
  • To identify correlation between fresh meat and processed meat products, we performed canonical correlation analysis (CCA) to predict the relationship between pork supply and meat product production in Korea. Results of CCA showed a canonical correlation of 0.8576 in the first canonical pair (p<0.01). The production of meat products showed the highest correlation with pork import but the lowest correlation with the production of domestic pork. Although Korean consumer preferred meat products produced by fresh domestic pork, inexpensively imported pork with high share in meat products was supplied in the market. Therefore, securing domestically produced raw meat is important for expanding consumption of domestic meat products. Results of this study suggest that meat processor and pig producer can achieve the $6^{th}$ industrialization by combining the production of raw pork materials, meat processing, and sales service.

주왕산국립공원 주왕계곡의 식물군집구조 (Plant Community Structure of Chuwang Valley in Chuwangsan National Park)

  • 이경재;조재창;강현경
    • 한국환경생태학회지
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    • 제8권2호
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    • pp.107-120
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    • 1995
  • 본 연구는 주왕산국립공원내 주왕계곡의 식물군집구조를 밝히기 위하여 30개소에 조사구(1개 조사구당 100$m^2$)를 설치하여 식생조사를 실시하였으며 군집구조분석에는 상대우점치, 흉고직경급 분포, 종다양도지수, DCA, CCA 및 TWINSPAN분석을 적용하였다. 30개 조사구의 우점수종은 소나무, 졸참나무, 신갈나무, 굴참나무이었으며 전체 조사구는 TWINSPAN에 의해 신갈나무-소나무-서어나무군집, 소나무-굴참나무군집, 졸참나무-굴참나무군집, 활엽수혼효림의 4개군집으로 분리되었다. 본 조사지의 종다양도는 1.17~l.32로 높게 나타났다. 천이계열은 교목상층에서 소나무$\longrightarrow$참나무류로의 천이가 진행될 것으로 예측되었다.

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Relationship between halophyte distribution and soil environmental factors in the west coast of South Korea

  • Lee, Seung Ho;Lee, Jeom-Sook;Kim, Jong-Wook
    • Journal of Ecology and Environment
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    • 제42권1호
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    • pp.12-19
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    • 2018
  • Background: The objective of this study was to determine the relationship between soil environmental factors and halophyte distribution in the west coast of South Korea. Soils of our study sites were categorized into two groups: salt marsh and estuary marsh. Results: Salinity was higher in the salt marsh group than that in the estuary marsh group. However, total nitrogen, silt, and clay contents were higher in the estuary marsh group than those in the salt marsh group. Although altitude had a wider range in the salt marsh group, the mean altitude was higher in the estuary marsh group than that in the salt marsh group. Annual halophytes of seed propagation species were distributed parallel to the coast line on salt marsh. Higher coverage of vegetation was found in the area closer to the coast line. Plant density was higher near dead parental plants in estuary marsh, showing less difference in area that was more distant from the coast line. Conclusions: Results of canonical correspondence analysis (CCA) for vegetation distribution and sediment environmental factors and germination analysis in the coast line showed significant relationship with halophyte distribution. Therefore, they can be used as an indicator of coastal plant movement due to sea level rise.

Penalized logistic regression using functional connectivity as covariates with an application to mild cognitive impairment

  • Jung, Jae-Hwan;Ji, Seong-Jin;Zhu, Hongtu;Ibrahim, Joseph G.;Fan, Yong;Lee, Eunjee
    • Communications for Statistical Applications and Methods
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    • 제27권6호
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    • pp.603-624
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    • 2020
  • There is an emerging interest in brain functional connectivity (FC) based on functional Magnetic Resonance Imaging in Alzheimer's disease (AD) studies. The complex and high-dimensional structure of FC makes it challenging to explore the association between altered connectivity and AD susceptibility. We develop a pipeline to refine FC as proper covariates in a penalized logistic regression model and classify normal and AD susceptible groups. Three different quantification methods are proposed for FC refinement. One of the methods is dimension reduction based on common component analysis (CCA), which is employed to address the limitations of the other methods. We applied the proposed pipeline to the Alzheimer's Disease Neuroimaging Initiative (ADNI) data and deduced pathogenic FC biomarkers associated with AD susceptibility. The refined FC biomarkers were related to brain regions for cognition, stimuli processing, and sensorimotor skills. We also demonstrated that a model using CCA performed better than others in terms of classification performance and goodness-of-fit.

기후변화에 따른 제주도 주변 해역 수산 어종 변화(1981-2010) (Multi-decadal Changes in Fish Communities Jeju Island in Relation to Climate Change)

  • 정석근;하승목;나한나
    • 한국수산과학회지
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    • 제46권2호
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    • pp.186-194
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    • 2013
  • We compiled and analyzed long-term time-series data collected in Korea to evaluate changes in oceanographic conditions and marine ecosystems near Jeju Island ($33^{\circ}00^{\prime}-34^{\circ}00^{\prime}\;N$, $125^{\circ}30^{\prime}-127^{\circ}30^{\prime}\;E$) from 1981 to 2010. Environmental data included depth-specific time series of temperature and salinity that have been measured bimonthly since 1961 in water columns at 175 fixed stations along 22 oceanographic lines in Korean waters by the National Fisheries Research & Development Institute, and time series of estimated volume transport of the Tsushima Warm Current (TWC) and Korea Strait Bottom Cold Water (KSBCW) for the period from 1961 to 2008. We analyzed the species composition in terms of biomass of fish species caught by Korean fishing vessels in the waters near Jeju Island (1981-2010). Data were summarized and related to environmental changes using canonical correspondence analysis (CCA). The CCA detected major shifts in fish community structure between 1982 and 1983 and between 1990 and 1992; the dominant species were a filefish during 1981-1992 and chub mackerel from 1992 to 2007. CCA suggested that water temperature and salinity in the mixed layer and the volume transport of the TWC and the KSBCW were significantly related to the long-term changes in the fish community in the waters off Jeju Island. Fish community shifts seemed to be related to the well-established 1989 regime shift in the North Pacific. Further studies are required to elucidate the mechanisms driving climate change effects on the thermal windows and habitat ranges of commercial species to develop fisheries management plans based on reliable projections of long-term changes in the oceanographic conditions in waters off Jeju Island.

Prevalence and Co-infection of Intestinal Parasites among Thai Rural Residents at High-risk of Developing Cholangiocarcinoma: A Cross-sectional Study in a Prospective Cohort Study

  • Songserm, Nopparat;Promthet, Supannee;Wiangnon, Surapon;Sithithaworn, Paiboon
    • Asian Pacific Journal of Cancer Prevention
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    • 제13권12호
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    • pp.6175-6179
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    • 2012
  • Intestinal parasitic infections (IPIs) are still important to the health of Thai rural residents. IPIs are the cause of many chronic diseases with, for example, opisthorchiasis resulting in progression to cholangiocarcinoma (CCA). This cross-sectional study in a prospective cohort study aimed to examine the prevalence and co-infection of intestinal parasites among Northeastern Thai rural residents, recruited into the Khon Kaen Cohort Study (KKCS), and who were residing in areas of high-risk for developing CCA. On recruitment, subjects had completed questionnaires and provided fecal samples for IPI testing using the formalin ethyl acetate concentration technique. Data on selected general characteristics and the results of the fecal tests were analysed. IPI test results were available for 18,900 of cohort subjects, and 38.50% were found to be positive for one or more types of intestinal parasite. The prevalence of Opisthorchis viverrini (O. viverrini) infection was the highest (45.7%), followed by intestinal flukes (31.9%), intestinal nematodes (17.7%), intestinal protozoa (3.02%), and intestinal cestodes (1.69%). The pattern of different infections was similar in all age groups. According to a mapping analysis, a higher CCA burden was correlated with a higher prevalence of O. viverrini and intestinal flukes and a greater intensity of O. viverrini. Both prevention and control programs against liver fluke and other intestinal parasites are needed and should be delivered simultaneously. We can anticipate that the design of future control and prevention programmes will accommodate a more community-orientated and participatory approach.

Pattern of Species Distribution along Environmental Variables in Two Different Forest Beat of Raghunandan Reserve Forest of Habiganj

  • Hosen, Md. Shahadat;Ahamed, Md. Saleh
    • Journal of Forest and Environmental Science
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    • 제33권4호
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    • pp.257-269
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    • 2017
  • The study has piloted to find the Pattern of species distribution along environmental variables and disturbance in Raghunandan Reserve Forest. Shaltila and Shahapur beat of Raghunandan Hill Reserve Forest are situated in Chunarughat sub-district of Habiganj district between $24^{\circ}5^{\prime}-24^{\circ}10^{\prime}N$ and $91^{\circ}25^{\prime}-91^{\circ}30^{\prime}E$ under the Sylhet Forest Division. The Environmental variable and vegetation data were collected from 30 sample plots from each forest beat by using arbitrary sampling without preconceived bias. 51 species were found from Shaltila and 34 species found in Shahapur forest beat. Thus the dataset continued with total 85 species in 60 samples. To determine the relationships between tree species distribution and environmental variables, Canonical Correspondence Analysis (CCA) ordination method were performed separately for two forest beat. In CCA ordination, tree species showed significant variation along environmental gradients in terms of soil organic matter and disturbances (p<0.05) in the case of Shaltila forest. Potassium has a significant relationship with axis 1 and axis 2 in this forest. But Shahapur forest showed no significant relationship between species and environmental variables. Phosphorus has a significantly negative relationship with axis 2 in this forest. Disturbance played as a critical role of this forest thus influencing the distribution of species. The study showed that the distributions of tree species are strongly influenced by disturbance and organic matter in Shaltila and Shahapur forest beat showed no significant relationship between species and environmental variables. Future research should be included more environmental variables with larger study area that identify the most important environmental forces which will drive by species distribution findings in this forest.

한반도 하구에 분포하는 식생(염생식물 군락)과 환경요인 간의 관계 (The Relationship between Vegetation (Halophyte Communites) Distribution and Environmental Factors in Estuaries in Korea)

  • 성낙필;문정숙;김종학
    • 생태와환경
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    • 제55권1호
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    • pp.19-34
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    • 2022
  • 본 연구는 환경부에서 수행 중인 하구 수생태계 현황 조사 및 건강성 평가 연구용역의 일부이며, 2016년~2018년까지 수행된 조사 결과를 분석하였다. 조사 결과 총 325개의 하구 중 식생분포가 확인되지 않은 25개 지점을 제외한 300개 하구에서 총 187개의 식물군락 유형이 조사되었으며 이 중 염생식물 군락은 53개로 28.3%였다. 하구순환 유형에 따라서는 열린하구에서 41개, 닫힌하구에서 26개 염생식물 군락이 확인되었다. 분포하는 식생과 환경요인 간의 정준상관분석(CCA) 결과 수질요인에서는 염도(전기전도도) 및 T-N, T-P 농도가 상관성이 강했으며 하상재료 요인 중에서는 Silt, Sand, Pebble 구성비율이 가장 강한 상관성을 나타내었다. 본 연구의 결과를 종합할 때 한반도 해안 하구에 분포하는 염생식물 군락의 분포 특성은 해역, 하구순환 유형, 염도에 대한 내성, 하상재료 분포 비율 등에 따라 각 우점종의 입지가 차별화되는 결과를 나타내었다.

금강송림의 식생구조에 관한 정량적 분석 (Quantitative Analysis of Vegetation Types in Pinus densiflora for. erecta Forest)

  • 윤충원;홍성천
    • The Korean Journal of Ecology
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    • 제23권3호
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    • pp.281-291
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    • 2000
  • 금강송림의 식생단위와 환경과의 상관관계, 종조성, 종다양도, 종간결합 등 생태학적 특성들에 대하여 정량적으로 연구하였던 바 다음과 같이 요약되었다. 1) CCA 방법으로 분석한 결과 주로 지형, 해발, 유효인산, 마그네슘 등의 환경요인들이 높은 상관관계를 보여주고 있었다. 꼬리진달래군락은 해발이 논고 사면상부나 능선부쪽 지형으로 갈수록 더 많이 분포하는 경향이었고, 마그네슘과 칼슘이온의 농도는 낮은 입지에 주로 분포하였다. 산앵도나무군락은 칼슘, 마그네슘의 이온농도가 높은 입지에 분포하는 경향이었고, 사면중상부와 능선부로 갈수록 많이 분포하는 경향이었다. 2) 중요치 분석결과 각 지역의 교목층과 아교목층에서 중요치가 높게 나타난 종은 금강송, 신갈나무, 굴참나무, 졸참나무, 물푸레나무 등이었으며, 관목층에서는 소광리 지역이 다른 지역에 비해 금강송의 중요치가 높게 나타났다. 즉, 소광리의 금강송 임분이 천연갱신이 가장 잘 되고 있음을 반영하였다. 3) 종다양도지수를 보면 울진이 0.6622로 가장 낮았고, 기타지역은 대부분 0.7내외로 나타났으며, 식생단위별 종다양도 지수는 당단풍군락이 높게 나타났다. 4) 소광리지역은 울진과는 군락유사도의 차이가 낮게 나타났으며, 기타지역간에는 군락유사도가 0.6이상으로 높게 나타났다. 5) 종간결합관계 분석 결과 크게 두 개의 그룹으로 구분되었다. 한 그룹은 식물사회학적 분석에서의 표징종군과, 또 한 그룹은 식별종군과 거의 일치하였다.

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