• Title/Summary/Keyword: C.T.R

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Analysis of Amino Acid Residues Affecting the Activity of QscR, a Quorum Sensing Receptor of Pseudomonas aeruginosa (녹농균(Pseudomonas aeruginosa)의 쿼럼 센싱 수용체인 QscR의 활성에 영향을 미치는 아미노산 잔기 분석)

  • Park, Su-Jin;Kim, Soo-Kyoung;Lee, Joon-Hee
    • Korean Journal of Microbiology
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    • v.48 no.3
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    • pp.180-186
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    • 2012
  • Pseudomonas aeruginosa, a Gram-negative bacterium, is an ubiquitous and opportunistic human pathogen, which expresses many virulence factors through quorum sensing (QS) regulation. QscR, one of the QS signal receptors of P. aeruginosa, has unique features that make it possible to distinguish QscR from other QS receptors. In the present study, we focused on amino acid residues responsible for such a broad signal specificity of QscR. Thus we constructed mutant QscRs: $QscR_{T72I}$, $QscR_{R132M}$, and $QscR_{T140I}$ by substituting $72^{nd}$ threonine, $132^{nd}$ arginine, and $140^{th}$ threonine residues with isoleucine, methionine, and isoleucine, respectively by site-directed mutagenesis. When we examined the activity of these mutant QscRs, $QscR_{R132M}$ failed to respond to N-3-oxododecanoyl homoserine lactone (3OC12-HSL), but $QscR_{T72I}$ and $QscR_{T140I}$ remained the ability to respond to 3OC12-HSL despite much reduction of the sensitivity. When we treated a variety of acyl-HSLs with different structure, $QscR_{T72I}$ and $QscR_{T140I}$ showed better responsiveness to N-decanoyl HSL (C10-HSL) or N-dodecanoyl HSL (C12-HSL) that has no oxo-moiety at $3^{rd}$ carbon of acyl group than to 3OC12-HSL, and $QscR_{R132M}$ showed no responsiveness to any acyl-HSLs tested here. In addition, $QscR_{T72I}$ and $QscR_{T140I}$ were inhibited by 5f, a QscR inhibitor as similarly as wild type QscR was. These results suggest that while the $130^{th}$ arginine is crucial in both activity and acyl-HSL binding of QscR, the $72^{nd}$ and $140^{th}$ threonines are important in the activity, but they are little responsible for the discrimination of acyl-HSLs or competitive inhibitor.

PULLBACKS OF 𝓒-HEREDITARY DOMAINS

  • Pu, Yongyan;Tang, Gaohua;Wang, Fanggui
    • Bulletin of the Korean Mathematical Society
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    • v.55 no.4
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    • pp.1093-1101
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    • 2018
  • Let (RDTF, M) be a Milnor square. In this paper, it is proved that R is a ${\mathcal{C}}$-hereditary domain if and only if both D and T are ${\mathcal{C}}$-hereditary domains; R is an almost perfect domain if and only if D is a field and T is an almost perfect domain; R is a Matlis domain if and only if T is a Matlis domain. Furthermore, to give a negative answer to Lee, s question, we construct a counter example which is a C-hereditary domain R with $w.gl.dim(R)={\infty}$.

Studies on Tolerance of Mice to X-rays (X-선에 대한 마우스의 내력)

  • 김정진
    • The Korean Journal of Zoology
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    • v.6 no.2
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    • pp.11-15
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    • 1963
  • A total of 220 adult male mice (18-20g) of the S.M. strain were divided into ten experimental and control groups. The total-body X-ray irradiation doses used were 50 r, 100r, 200r, 400r, 600r, 800r, 1,000r, 1,200r, 1,400r, and1,600r. The respiratory arrest (mortality) caused by each irradiation doses were observed for 30 days. Relationships between irradiation doses and survival time and percentage of response were examined. From this experiment, a formula was obtained to express the relationship among three factors, which may be presented as follows : {{{{{{{{P= { 10} over { SQRT { 2 pi } } INT _{ - INF }^{ p'} e-{(p'-50)^2 } over {200 }dp···(a) p'=100 LEFT { t^0.3- LEFT ( { { 16.9965} over {D-60 } } RIGHT ) ^{ { 1} over {2.5 } } } / LEFT { LEFT ( { 26372.43} over {D-81.86 } RIGHT ) ^{ { 1} over {2.5 } } -( { { 16.9965} over {D-60 } } RIGHT ) ^{ { 1} over {2.5 } } ···(b) p= { (D-60) t^0.75-16.9965} over {0.2186 t^0.75 +263.55434 }····(c) }} {{{{P= { 10} over { SQRT { 2 pi } } INT _{ - INF }^{ p'} e-{(p'-50)^2 } over {200 }dp···(a) p'=100 LEFT { t^0.3- LEFT ( { { 16.9965} over {D-60 } } RIGHT ) ^{ { 1} over {2.5 } } } / LEFT { LEFT ( { 26372.43} over {D-81.86 } RIGHT ) ^{ { 1} over {2.5 } } -( { { 16.9965} over {D-60 } } RIGHT ) ^{ { 1} over {2.5 } } ···(b) p= { (D-60) t^0.75-16.9965} over {0.2186 t^0.75 +263.55434 }····(c)

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Germ-line MTHFR C677T, FV H1299R and PAI-1 5G/4G Variations in Breast Carcinoma

  • Ozen, Filiz;Erdis, Eda;Sik, Ebru;Silan, Fatma;Uludag, Ahmet;Ozdemir, Ozturk
    • Asian Pacific Journal of Cancer Prevention
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    • v.14 no.5
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    • pp.2903-2908
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    • 2013
  • Background: Various oncogenes related to cancer have been extensively studied and several polymorphisms have been found to be associated with breast cancer. The current report outlines analysis of germ-line polymorphisms for C677T, A1298C (MTHFR), Leiden, R2 (FV) and 5G/4G (PAI-1) in Turkish breast cancer patients. We studied 51 cases diagnosed with invasive ductal and operable with lymph node-positive breast cancer and 106 women as a control group. Materials and Methods: Peripheric blood-DNA samples were used for genotyping by StripAssay technique which is based on the reverse-hybridization principle and real-time PCR methods and results were compared statistically. Results: The frequency of the MTHFR gene 677T and 1298A alleles were significantly higher in cancer patients than in the healthy subjects. The T allele frequency in codon 677 was 2.3-fold and C allele frequency was 3.1-fold increased in BC when compared to the control group for the MTHFR gene. Both differences were statistically significant (OR: 2.295, CI: 1.283-4.106), p<0.006 and (OR: 3.131, CI:1.826-5.369), p<0.0001 respectively. The R2 allele frequency of FV gene was 5.1-fold increased in the current BC when compared to the control group and that difference was also statistically significant (OR: 5.133, CI: 1.299-20.28), p<0.02. Conclusions: The present data suggest that germ-line polymorphisms of C677T, C1298A for MTHFR and R2 for FV are associated in breast cancer and may be additional prognostic markers related to breast cancer survival. The results now need to be confirmed in a larger group of patients.

Acinetobacter marinus sp. novo and Acinetobacter seohaensis sp. nov., Isolated from Sea Water of the Yellow Sea in Korea

  • Yoon, Jung-Hoon;Kim, In-Gi;Oh, Tae-Kwang
    • Journal of Microbiology and Biotechnology
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    • v.17 no.11
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    • pp.1743-1750
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    • 2007
  • Two Gram-negative, nonmotile, coccobacilli, SW-$3^T$ and SW-$100^T$, were isolated from sea water of the Yellow Sea in Korea. Strains SW-$3^T$ and SW-$100^T$ contained ubiquinone-9 (Q-9) as the predominant respiratory lipoquinone and $C_{18:1}\;{\omega}9c$ and $C_{16:0}$ as the major fatty acids. The DNA G+C contents of strains SW-$3^T$ and SW- $100^T$ were 44.1 mol% and 41.9 mol%, respectively. A neighbor-joining tree based on l6S rRNA gene sequences showed that the two isolates fell within the evolutionary radiation enclosed by the genus Acinetobacter. Strains SW-$3^T$ and SW-$100^T$ exhibited a l6S rRNA gene similarity value of 95.7% and a mean DNA-DNA relatedness level of 9.2%. Strain SW-$3^T$ exhibited l6S rRNA gene sequence similarity levels of 93.5-96.9% to the validly described Acinetobacter species and fifteen Acinetobacter genomic species. Strain SW-$100^T$ exhibited l6S rRNA gene sequence similarity levels of less than 97.0% to the other Acinetobacter species except Acinetobacter towneri DSM $14962^T$ (98.0% similarity). Strains SW-$3^T$ and SW-$100^T$ exhibited mean levels of DNA-DNA relatedness of 7.3-l6.7% to the type strains of some phylogenetically related Acinetobacter species. On the basis of phenotypic, phylogenetic, and genetic data, strains SW-$3^T$ and SW-$100^T$ were classified in the genus Acinetobacter as two distinct novel species, for which the names Acinetobacter marinus sp. novo (type strain SW-$3^T$=KCTC $12259^T$=DSM $16312^T$) and Acinetobacter seohaensis sp. novo (type strain SW-$100^T$=KCTC $12260^T$=DSM $16313^T$) are proposed, respectively.

An application of the tubular roof construction method for Seoul subway tunnel construction (서울지하철 터널의 T.R.c.M. 공법 적용 사례 연구)

  • Jie, Hong-Keun;You, Kwang-Ho;Park, Yeon-Jun
    • Journal of Korean Tunnelling and Underground Space Association
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    • v.6 no.4
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    • pp.345-356
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    • 2004
  • Open-cut method has been widely used to construct underground structures, but it causes several problems such as traffic congestion and public resentment resulting from severe construction noise and ground settlement. In many cases, it is very difficult to build underground structures safely due to the unknown locations of buried facilities such as water pipes, drainage pipes, gas pipes and high-pressure cable conduits etc. Also in open-cut method, moving buried facilities causes additional cost and extension of construction period. Therefore, this paper is to present a case study in which Tubular Roof construction Method (T.R.c.M.), a newly developed construction method for underground structures using slab steel pipes and PC wall trench, is applied for the construction of a subway tunnel in Seoul. As a result, it is found that T.R.c.M. is a construction method by which tunnels can be constructed safely without any effect on the surrounding environment and traffic flow due to the minimized construction vibration and noise.

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A Study on the Color Temperature and the Color Rendering Variations of Light Sources (광원의 색온도 및 연색성 변화에 관한연구)

  • Kim, Hoon;Han, Jong-Seong
    • The Proceedings of the Korean Institute of Illuminating and Electrical Installation Engineers
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    • v.5 no.2
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    • pp.49-57
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    • 1991
  • A simple system to measure the correlated color temperature ($T_c$) and color rendering index ($R_a$) oflight sources was developed. And the T, and R, of incandescent lamps (I/L) and various fluorescent lamps(F/L) were measured with varying source voltage and power frequency. As results, $T_c$ variations of I/L and F/L with varying source voltage were relatively large, but $R_a$, variations were small. And $T_c$, $R_a$, variations of F/L under 5OkHz of power frequency were small, but over 50kHz, it is supposed that $T_c$, and $R_a$, will vary significantly.

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The Parametrization and Structure Analysis for a Perspective Silhouette of a Canal Surface (Canal 곡면의 투시 윤곽곡선의 매개변수화 및 구조 분석)

  • Kim, Ku-Jin;Lee, In-Kwon
    • Journal of the Korea Computer Graphics Society
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    • v.7 no.3
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    • pp.1-7
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    • 2001
  • We present an efficient and robust algorithm to parametrize a perspective silhouette curve of a canal surface. We also detect each connected component of the silhouette. A canal surface is an envelope surface of a moving sphere with varying radii, which is defined by the center trajectory C(t) and radius function r(t) of the moving sphere. A canal surface can be decomposed to a set of characteristic circles. We derive the equations for the silhouette points on each characteristic circle, then parameterize the silhouette curve by using the equation. The sphere $S(t_*)$ with center point $C(t_*)$ and radius $r(t_*)$ intersects with the canal surface at a characteristic circle $K(t_*)$. The perspective silhouette of the sphere $S(t_*)$ from given view point consists of a circle $Q(t_*)$. By finding the values of t at which K(t) and Q(t) tangentially intersect, we detect each connected component of the silhouette curve.

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ON OPERATORS T COMMUTING WITH CT C WHERE C IS A CONJUGATION

  • Cho, Muneo;Ko, Eungil;Lee, Ji Eun
    • Bulletin of the Korean Mathematical Society
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    • v.57 no.1
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    • pp.69-79
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    • 2020
  • In this paper, we study the properties of T satisfying [CTC, T] = 0 for some conjugation C where [R, S] := RS - SR. In particular, we show that if T is normal, then [CTC, C] = 0. Moreover, the class of operators T satisfy [CTC, T] = 0 is norm closed. Finally, we prove that if T is complex symmetric, then T is binormal if and only if [C|T|C, |T|] = 0.

Preparation and Structure of trans-Bis(tert-butylamine)dichloropalladium(II), trans-[$PdCl_2(t-BuNH_2)_2$] (trans-Bis(tert-butylamine)dichloropalladium(II), trans-[$PdCl_2(t-BuNH_2)_2$의 합성 및 구조)

  • 김혜진;한원석;이순원
    • Korean Journal of Crystallography
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    • v.12 no.1
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    • pp.10-13
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    • 2001
  • Compound PdCl₂(PhCN)₂(1) reacted with tert-butylamine(t-BuNH₂) to give trans-[PdCl₂(t-BuNH₂)₂] (2) Compound 2 was characterized by spectroscopy (¹H-NMR, /sup 13/C{¹H}-NMR, and IR) and X-ray diffraction. Crystallographic data for f2: monoclinic space group p2₁/c, a=6.298(1)Å, b=20.740(2)Å, c=10.731(1)Å, β=92.58(1)°, Z=4, R(wR₂)=0.0207(0.0543).

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