• 제목/요약/키워드: C-H cleavage

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Oxidative Damage of DNA Induced by the Cytochrome c and Hydrogen Peroxide System

  • Kim, Nam-Hoon;Kang, Jung-Hoon
    • BMB Reports
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    • 제39권4호
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    • pp.452-456
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    • 2006
  • To elaborate the peroxidase activity of cytochrome c in the generation of free radicals from $H_2O_2$, the mechanism of DNA cleavage mediated by the cytochrome c/$H_2O_2$ system was investigated. When plasmid DNA was incubated with cytochrome c and $H_2O_2$, the cleavage of DNA was proportional to the cytochrome c and $H_2O_2$ concentrations. Radical scavengers, such as azide, mannitol, and ethanol, significantly inhibited the cytochrome c/$H_2O_2$ system-mediated DNA cleavage. These results indicated that free radicals might participate in the DNA cleavage by the cytochrome c and $H_2O_2$ system. Incubation of cytochrome c with $H_2O_2$ resulted in a time-dependent release of iron ions from the cytochrome c molecule. During the incubation of deoxyribose with cytochrome c and $H_2O_2$, the damage to deoxyribose increased in a time-dependent manner, suggesting that the released iron ions may participate in a Fenton-like reaction to produce $\cdot$OH radicals that may cause the DNA cleavage. Evidence that the iron-specific chelator, desferoxamine (DFX), prevented the DNA cleavage induced by the cytochrome c/$H_2O_2$ system supports this mechanism. Thus we suggest that DNA cleavage is mediated via the generation of $\cdot$OH by a combination of the peroxidase reaction of cytochrome c and the Fenton-like reaction of free iron ions released from oxidatively damaged cytochrome c in the cytochrome c/$H_2O_2$ system.

이소니트릴의 자유라디칼반응 (Homolytic Reactions of Isonitriles)

  • 김성수
    • 대한화학회지
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    • 제24권3호
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    • pp.250-258
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    • 1980
  • 여러종류의 자유라디칼들이 이소니트릴에 첨가되어 중간체인 imidoyl 자유라디칼 RN=CR'을 형성한다. 이것은 또한 imine으로부터 imidoyl hydrogen 을 떼어 내는 다음과 같은 반응에 의해서도 생성될 수 있다. RN=C(H)R' + R"${\cdot}{\rightarrow}$ RN=CR' + R"-H 중간체인 imidoyl 자유라디칼은 ${\beta}$-cleavage 및 aton transfer 반응을 통해서 안정된 분자를 형성한다. ${\beta}$-cleavage는 imidoyl 자유라디칼의 구조에 따라서 두개의 다른 방향으로의 반응이 가능하다. Cyanide transfer와 소위 말하는 정상적인 ${\beta}$-cleavage가 그러한 반응들이다. t-Butoxy 자유라디칼이 t-butylisonitrile 7에 첨가되면 중간체인 t-Bu-N=C-O-Bu-t가 생성되는데, 이것은 ${\beta}$-cleavage반응을 통해서 t-butylisocyanate와 t-butyl 자유라디칼을 형성한다. Phenyl 자유라디칼은 7에 첨가되어 중간체인 t-Bu-N=$C-C_6H_5$를 형성하는데 이것은 cyanide transfer 반응을 통해서 benzonitrile과 t-butyl 자유라디칼로 분해된다. 여기서 생성되는 t-butyl 자유라디칼은 다시 7에 첨가하여 intermediate인 자유라디칼 t-Bu-N=C-Bu-t을 형성하고, 이것은 다시 pivalonlonitrile과 t-butyl 자유라디칼로 분해되는데 이러한 반응이 반복되므로 radical chain isomerization을 일으킨다. Silyl 자유라디칼은 7에 첨가되어 t-Bu-N=$C-Si(CH_3)_3$를 형성하고, 이것은 cyanide transfer 반응을 거쳐서 다시 $(CH_3)_3$SiCN과 t-butyl 자유라디칼로 분해된다.

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Glucose가 소 초기배의 분할 및 발육에 미치는 영향 (Effects of Glucose on the Cleavage and Further Development of Early Bovine Embryos)

  • 노상호;이병천;황우석
    • 한국수정란이식학회지
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    • 제12권2호
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    • pp.161-169
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    • 1997
  • This study was conducted to compare the insemination time of bovine oocytes and determine the effects of glucose(1.5 mM) on the development of bovine embryos at early cleavage stage. Oocytes were matured for 24 h, followed by exposure to sperm and cultured in modified Tyrode's media drops or with bovine oviduct epithelial cell monolayer prepared in TCM199(BOECM). Insemination time and culture system were varied in each experiment. In experiment 1, to investigate the developmental capacity of bovine embryos after different time of exposure to sperm, bovine ova and sperm were co-incubated for 18, 30 or 54 h, respectively. The development to blastocysts of 30 and 54 h insemination groups were significantly higher(P<0.05) than 18 h group, and in case of blastocysts of cleaved embryos, 30 h group were significantly higher(P<0.05) than other groups. In experiment 2, we investigated the effect of glucose on early bovine embryos. After 18 h insemination, in vitro fertilized oocytes were separated following 3 groups ; G+0, C+24 and C+48. Oocytes of G+0 group were cultured in glucose added Tyrode's medium after fertilization, oocytes in C+24 and C+48 groups were cultured in glucose free Tyrode's medium after fertilization. After 24 h culture, G+24 group was moved to glucose added medium. All oocytes of 3 groups were moved to BOECM after 48 h culture. The rates of cleavage and development to blastocysts in G+0 group were significantly lower than other groups. In experiment 3, we determined the effects of glucose exposure from 8 to 20 h after insemination on the cleavage and development of oocytes. The oocytes in glucose added group had high capacity of cleavage and further development. This study shows that in bovine oocytes, the optimal exposure to sperm is 30 h and glucose exposure to bovine one-cell embryos is detrimental to their first cleavage and further development in vitro but there has no evidence of detrimental effect of glucose(1.5 mM) exposure to bovine embryos over the two-cell stage in vitro.

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핵산 모델로서 Phosphate Diester들의 가수분해 반응 (Hydrolysis of Phosphate Diesters as Nucleic Acid Model)

  • 성낙도
    • Applied Biological Chemistry
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    • 제37권6호
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    • pp.447-450
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    • 1994
  • RNA의 가수분해시에 생성되는 cyclic phosphate 중간체의 모델 화합물인 ethylene phosphate의 P-O결합 분해속도 상수는 $100^{\circ}C$ 에서 $k=3{\times}10^{-7}s^{-1}({\Delta}H{\neq}=24\;kcal,\;{\Delta}S{\neq}=25.5\;eu)$이었으며 DNA모델 화합물인 dimethylphosphate는 $150^{\circ}C$에서 $1{\times}10^{-11}s^{-1}({\Delta}H{\neq}=36\;kcal,\;{\Delta}S{\neq}=25.5\;eu)$이었다. RNA모델 화합물인 hydroxyethylmethylphosphate의 가수분해는 dimethylphosphate의 C-O결합이 가수분해되는 반응속도와 비교될 만한 정도의 반응속도가 관측되었다.

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In vitro maturation of ovine oocyte in a modified granulosa cells co-culture system and alpha-tocopherol supplementation: effects on nuclear maturation and cleavage

  • Adeldust, Hamideh;Zeinoaldini, Saeed;Kohram, Hamid;Roudbar, Mahmoud Amiri;Joupari, Morteza Daliri
    • Journal of Animal Science and Technology
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    • 제57권8호
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    • pp.27.1-27.6
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    • 2015
  • This study was designed to investigate the effects of ${\alpha}$-tocopherol and granulosa cells monolayer on nuclear maturation and cleavage rates of ovine cumulus-oocyte complexes (COCs). The COCs (n = 2814) were matured in maturation medium supplemented with various concentration of ${\alpha}$-tocopherol (0, 5, 10, $15{\mu}g/ml$), oocytes were incubated at $39^{\circ}C$ with 5 % $CO_2$ for 24 h in three culture systems: (a) maturation medium (MM; n = 884), (b) co-cultured with granulosa cells (CG; n = 982) and (c) co-cultured with granulosa cells and cells were further cultured in MM for 12 h (CG + 12hMM; n = 948). Our results showed that ${\alpha}$-tocopherol had no effect on GVBD and MII as compared to control group, but when ${\alpha}$-tocopherol added to maturation medium the rate of cleavage decreased. This indicates interaction of above mentioned factors in any of the treatments showed no significant differences on the rate of maturation and cleavage stages (MII, GVBD and cleavage) (p > 0.05). The oocytes co-cultured with granulosa cells for 24 h had beneficial effects on cleavage rate. The maximum MII and cleavage rates were achieved when oocytes had extra 12 h culture in the maturation medium without granulosa cells. Results also showed our modified co-culture system (CG + 12hMM), improved rates of MII and the cleavage in comparison with other studied maturation systems.

Density Functional Study on the C-H Bond Cleavage of Aldimine by a Rhodium(I) Catalyst

  • Yoo, Kyung-Hwa;Jun, Chul-Ho;Choi, Cheol-Ho;Sim, Eun-Ji
    • Bulletin of the Korean Chemical Society
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    • 제29권10호
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    • pp.1920-1926
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    • 2008
  • We investigated the C-H bond activation mechanism of aldimine by the [RhCl$(PPH_3)_3$] model catalyst using DFT B3LYP//SBKJC/6-31G*/6-31G on GAMESS. Due to their potential utility in organic synthesis, C-H bond activation is one of the most active research fields in organic and organometallic chemistry. C-H bond activation by a transition metal catalyst can be classified into two types of mechanisms: direct C-H bond cleavage by the metal catalyst or a multi-step mechanism via a tetrahedral transition state. There are three structural isomers of [RhCl$(PH_3)_2$] coordinated aldimine that differ in the position of chloride with respect to the molecular plane. By comparing activation energies of the overall reaction pathways that the three isomeric structures follow in each mechanism, we found that the C-H bond activation of aldimine by the [RhCl$(PH_3)_3$] catalyst occurs through the tetrahedral intermediate.

백색부후균에 의한 크라프트 리그닌의 분해(I) -리기다소나무 리그닌- (Biodegradation of Kraft Lignins by White-Rot Fungi(I) -Lignin from Pitch Pine-)

  • 김명길;안원영
    • 임산에너지
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    • 제17권1호
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    • pp.56-70
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    • 1998
  • This study was carried out to investigate the structural characteristics of kraft lignin and the wood degrading characteristics, the productivity of ligninolytic enzymes and the enzymatic degradation of kraft lignin by white-rot fungi. To purify kraft lignin, precipitation of kraft pulping black liquors of pitch pine meal was done by titration with lN $H_{2}SO_{4}$ reaching to pH 2, and isolation of the precipitates done by centrifugation. The isolated precipitates from pitch pine were redissloved in lN NaOH, reprecipitated by titration with lN $H_{2}SO_{4}$, washed with deionized water, and kept ofr analysis after freeze drying. Fractionation of the precipitates in solution by successive extraction with $CH_{2}Cl_{2}$ and MeOH, and the fractionates were named SwKL, SwKL I, SwKL II, and SwKL III for pitch pine kraft lignin. The more molecular weights of kraft lignin increased, the less phenolic hydroxyl groups and the more aliphatic hydroxyl groups. Because as the molecular weights increased, the ratio of etherified guaiayl/syringyl(G/S ratio) and the percentage were increased. The spectra obtained by 13C NMR and FTIR assigned by comparing the chemical shifts of various signals with shifts of signals from autherized ones reported. The optimal growth temperature and pH of white-rot fungi in medium were $28^{\circ}C$ and 4.5-5.0, respectively. Especially, in temperature and pH range, and mycelial growth, the best white-rot fungus selected was Phanerochaete chrysosporium for biodegradation. For the degradation pathways, the ligninolytic fungus jcultivated with stationary culture using medium of 1% kraft lignin as a substrate for 3 weeks at $28^{\circ}C$. The weight loss of pitch pine kraft lignin was 15.8%. The degraded products extracted successively methoanol, 90% dioxane and diethyl ether. The ether solubles were analyzed by HPLC. Kraft lignin degradation was initiated in $\beta$-O-4 bonds of lignin by the laccase from Phanerochaete chrysosporium and the degraded compounds were produced from the cleavage of $C\alpha$-$C\beta$ linkages at the side chains by oxidation process. After $C\alpha$-$C\beta$ cleavage, $C\alpha$-Carbon was oxidized and changed into aldehyde and acidic compounds such as syringic acid, syringic aldehyde and vanilline. And the other compound as quinonemethide, coumarin, was analyzed. The structural characteristics of kraft lignin were composed of guaiacyl group substituted functional OHs, methoxyl, and carbonyl at C-3, -4, and -5 and these groups were combinated with $\alpha$ aryl ether, $\beta$ aryl ether and biphenyl. Kraft lignin degradation pathways by Phanerochaete chrysosporium were initially accomplished cleavage of $C\alpha$-$C\beta$ linkages and $C\alpha$ oxidation at the propyl side chains and finally cleavage of aromatic ring and oxidation of OHs.

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CDST, a Derivative of Tetrahydroisoquinoline, Induced Apoptosis in HL-60 Cells through Activation of Caspase-8, Bid Cleavage and Cytochrome c Release

  • Ju, Sung-Min;Kim, Kun-Jung;Lee, Jong-Gil;Lee, Chai-Ho;Han, Dong-Min;Yun, Young-Gab;Hong, Gi-Yun;An, Won-Gun;Jeon, Byung-Hun
    • 동의생리병리학회지
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    • 제19권3호
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    • pp.802-810
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    • 2005
  • The tetrahydroisoquinolines included potent cytotoxic agents that showed antitumor activity,antimicrobial activity, and other biological properties. We studied the effect of CDST, 1-Chloromethyl-6,7-dimethoxy-3,4-dihydro-1H-isoquinoline-2-sulfonic acid amide, a newly synthesized anti-cancer agent. The cytotoxic activity of CDST in HL-60 cells was increased in a dose-dependent manner. CDST, tetrahydroisoquinolines derivative, was cytotoxic to HL-60 cells, with IC50 of $80{\mu}g/ml$. Treatment of CDST to HL-60 cells showed the fragmentation of DNA in a dose- and time dependent manner, suggesting that thesecells underwent apoptosis. Treatment of HL-60 cells with CDST was induced in a dose- and time-dependent activation of caspase-3, caspase-8 and proteolytic cleavage of poly(ADP-ribose) polymerase. In caspase activity assay, caspase-3 and -8 was activated after 12 h and 6 h posttreatment, respectively. CDST also caused the release of cytochrome c from mitochondria into the cytosol. CDST-induced cytochrome c release was mediated by caspase-8-dependent cleavage of Bid and Bax translocation. These results suggest that caspase-8 induced Bid cleavage and Bax translocation, caused mitochondrial cytochrome c release, and induce caspase-3 activationduring CDST-induced apoptosis in HL-60 cells.

Lycopene으로부터 산화개열산물의 생성 (Formation of Oxidative Cleavage Products from Lycopene)

  • 김선재
    • 한국식품과학회지
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    • 제32권6호
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    • pp.1227-1233
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    • 2000
  • Lycopene을 dichloromethan에 용해하고 dry ice 상에서 ozonolysis을 행하였다. Ozonolysis에 의해 생성된 산화개열산물은 silica gel chromatography를 행하여 분획하고, photodiode array detector를 이용하여 ODS-HPLC와 LC-MS를 이용하여 분석하였다. Lycopene으로부터 생성된 carbonyl 화합물로 acycloretinal, apo-14'-lycopenal, apo-12'-lycopenal, apo-10'-lycopenal, apo-8'-lycopenal 그리고 apo-6'-lycopenal이 동정되었다. Lycopene을 toluene 및 Tween 40 수용액에 용해하고 $37^{\circ}C$에서 자동산화시킨 결과, 다수의 carbonyl 화합물이 생성되었다. Lycopene의 자동산화에 의해 생성된 carbonyl 화합물의 대부분은 ozonolysis에 얻어진 산화개열산물이 나타내는 HPLC상의 거동과 분광학적 특성이 서로 잘 일치하였다. 이러한 결과는 in vitro 상의 산화적 조건하에서 lycopene 자동산화에 의해 eccentric cleavage가 생성됨을 알 수 있었다.

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