• Title/Summary/Keyword: Biomedical technology

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Comparative Proteomic Profiling of Pancreatic Ductal Adenocarcinoma Cell Lines

  • Kim, Yikwon;Han, Dohyun;Min, Hophil;Jin, Jonghwa;Yi, Eugene C.;Kim, Youngsoo
    • Molecules and Cells
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    • v.37 no.12
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    • pp.888-898
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    • 2014
  • Pancreatic cancer is one of the most fatal cancers and is associated with limited diagnostic and therapeutic modalities. Currently, gemcitabine is the only effective drug and represents the preferred first-line treatment for chemotherapy. However, a high level of intrinsic or acquired resistance of pancreatic cancer to gemcitabine can contribute to the failure of gemcitabine treatment. To investigate the underlying molecular mechanisms for gemcitabine resistance in pancreatic cancer, we performed label-free quantification of protein expression in intrinsic gemcitabine-resistant and -sensitive human pancreatic adenocarcinoma cell lines using our improved proteomic strategy, combined with filter-aided sample preparation, single-shot liquid chromatography-mass spectrometry, enhanced spectral counting, and a statistical method based on a power law global error model. We identified 1931 proteins and quantified 787 differentially expressed proteins in the BxPC3, PANC-1, and HPDE cell lines. Bioinformatics analysis identified 15 epithelial to mesenchymal transition (EMT) markers and 13 EMT-related proteins that were closely associated with drug resistance were differentially expressed. Interestingly, 8 of these proteins were involved in glutathione and cysteine/methionine metabolism. These results suggest that proteins related to the EMT and glutathione metabolism play important roles in the development of intrinsic gemcitabine resistance by pancreatic cancer cell lines.

Maintained MPF Level after Oocyte Vitrification Improves Embryonic Development after IVF, but not after Somatic Cell Nuclear Transfer

  • Baek, Ji I;Seol, Dong-Won;Lee, Ah-Reum;Lee, Woo Sik;Yoon, Sook-Young;Lee, Dong Ryul
    • Molecules and Cells
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    • v.40 no.11
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    • pp.871-879
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    • 2017
  • Levels of maturation-promoting factor (MPF) in oocytes decline after vitrification, and this decline has been suggested as one of the main causes of low developmental competence resulting from cryoinjury. Here, we evaluated MPF activity in vitrified mouse eggs following treatment with caffeine, a known stimulator of MPF activity, and/or the proteasome inhibitor MG132. Collected MII oocytes were vitrified and divided into four groups: untreated, 10 mM caffeine (CA), $10{\mu}M$ MG132 (MG), and 10 mM caffeine + $10{\mu}M$ MG132 (CA+MG). After warming, the MPF activity of oocytes and their blastocyst formation and implantation rates in the CA, MG, and CA+MG groups were much higher than those in the untreated group. However, the cell numbers in blastocysts did not differ among groups. Analysis of the effectiveness of caffeine and MG132 for improving somatic cell nuclear transfer (SCNT) technology using cryopreserved eggs showed that supplementation did not improve the blastocyst formation rate of cloned mouse eggs. These results suggest that maintaining MPF activity after cryopreservation may have a positive effect on further embryonic development, but is unable to fully overcome cryoinjury. Thus, intrinsic factors governing the developmental potential that diminish during oocyte cryopreservation should be explored.

Gyro-Mouse for the Disabled: 'Click' and 'Position' Control of the Mouse Cursor

  • Eom, Gwang-Moon;Kim, Kyeong-Seop;Kim, Chul-Seung;Lee, James;Chung, Soon-Cheol;Lee, Bong-Soo;Higa, Hiroki;Furuse, Norio;Futami, Ryoko;Watanabe, Takashi
    • International Journal of Control, Automation, and Systems
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    • v.5 no.2
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    • pp.147-154
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    • 2007
  • This paper describes a 'gyro-mouse', which provides a new human-computer interface (HCI) for persons who are disabled in their upper extremities, for handling the mouse-click and mouse-move function. We adopted the artificial neural network to recognize a quick-nodding pattern of the disabled person as the gyro-mouse click. The performance of our gyro-mouse was evaluated by three indices that include 'click recognition rate', 'error in cursor position control', and 'click rate per minute' on a target box appearing at random positions. Although it turned out that the average error in cursor positioning control was 1.4-1.5 times larger than that of optical mouse control, and the average click rate per minute was 40% of the optical mouse, the overall click recognition rate was 93%. Moreover, the click rate per minute increased from 35.2% to 44% with repetitive trials. Hence, our suggested gyro-mouse system can be used to provide a new user interface tool especially for those persons who do not have full use of their upper extremities.

Objective Evaluation of Beamforming Techniques for Hearing Devices with Two-channel Microphone (2채널 마이크로폰을 이용한 청각 기기에서의 빔포밍에 대한 객관적 검증)

  • Cho, Kyeong-Won;Han, Jong-Hee;Hong, Sung-Hwa;Lee, Sang-Min;Kim, Dong-Wook;Kim, In-Young;Kim, Sun-I.
    • Journal of Biomedical Engineering Research
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    • v.32 no.3
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    • pp.198-206
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    • 2011
  • Hearing devices like cochlear implant, vibrant soundbridge, etc. try to offer better sound for people. In hearing devices, several beamformers including conventional directional microphone are applicable to noise reduction. Each beamformer has different directional response and it could change sound intelligibility or quality for listeners. Therefore, we investigated the performance of three beamformers, which are first and second order directional microphone, and broadband beamformer(BBF) with a computer simulation assuming hearing device microphone configuration. We also calculated objective measurements which have been used to evaluate speech enhancement algorithms. In the simulation, a single speech and a single babble noisewere propagated from the front and $135^{\circ}$ azimuth degrees respectively. Microphones were configured in an end-fire array and the spacing was varied in comparison. With 3 cm spacing, BBF had about 3 dB higher enhanced SNR than that of directional microphones. However, enhancement of segmental SNR and frequency weighted segmental SNR were similar between the first order directional microphone and broadband beamformer. In addition when steady state noise was used, broadband beamformer showed the increased performance and had the highest enhanced SNR, and segmental SNR.

Effects of Soybean Peptide Intake on Antioxidant Enzyme, Cortisol and Inflammatory Cytokines in High School Judo Athletes

  • Bae, Su-Jung;Lee, Da-Kyoung;Son, Chang-Seob;Lee, Hye-Sook;Lee, Jang-Woon;Lee, Yoon-Bok;Yoo, Yung-Choon;Park, Jin-Hong;Hong, Seung-Bok;Hwang, Seock-Yeon
    • Biomedical Science Letters
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    • v.18 no.1
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    • pp.22-28
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    • 2012
  • The purpose of this study was to investigate the effect of soybean peptide on antioxidant enzymes, cortisol hormone and inflammatory cytokine levels. 19 high school male judo athletes participated in the experiments. They were randomly divided into two groups, one group took soybean peptide (S-peptide, n=10) 4 g a day for 4 weeks and the other group placebo (placebo group, n=9) for the same time. Blood samples were collected before intake, after 2 weeks intake and 4 weeks intake and these were analyzed for total antioxidant status (TAS), catalase (CAT), levels of cortisol hormone, tumor necrosis factor-alpha (TNF-${\alpha}$) and interleukin-6 (IL-6). As a result, the S-peptide group was significantly increased in TAS and CAT (P<0.05). The malondialdehyde (MDA) levels showed decrease after soybean peptide intake but there was no significant difference. In the levels of plasma cortisol which reflect stress status, there was significantly decreased in the S-peptide and placebo group after 4 weeks (P<0.05). There were significant decreases of TNF-${\alpha}$ and IL-6 after 4 weeks in S-peptide group (P<0.05). These results suggest that the intake of soybean peptide can activate antioxidant defenses and decrease exercise-induced oxidative stress.

Protective Effect of Mulberry Leaf and Yacon Extract Induced Hyperlipidemia in Obese Rats

  • Lim, Yong;Oh, Ji Hye;Park, Un Kyu;Huh, Man Kyu;Hwang, Seock-Yeon
    • Biomedical Science Letters
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    • v.26 no.2
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    • pp.101-108
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    • 2020
  • There has been a lot of interest in medicinal effects for hyperlipidemia from the natural product since the therapy of atherosclerosis has emerged as social concern. Rats were acclimated to the feeding environment for one week and induced to obesity with high fat diet during 4 weeks until their body weight were more than 30% of normal range. To evaluate the effect of hyperlipidemia of mulberry leaf of Morus alba and yacon tuber of Smallanthus sonchifolia extracts (MLYT), 1%, 3%, 5% of MLYT were treated to Sprague-Dawley rats. Aspartate transaminase (AST) was significantly increased 26.2% in high fat diet group (G2) compared to normal diet group (G1) (P<0.05). But AST were significantly decreased in high fat diet with 0.5% hydroxycitric acid diet group (G3) and all the MLYT treated groups compared to G2. Total cholesterol, low-density lipoprotein (LDL), triglycerides and phospholipids were observed significant improvements in the MLYT-treated groups (P<0.05). These improvements in liver and feces were further supported by the lipid content. MLYT remarkably suppressed the level of lipid peroxidation caused by high-fat diet in rats. The level of 3-hydroxy-3-methyl-glutaryl-coenzyme A (HMG-CoA) reductase activity. As a result, the proper combination of mulberry leaves and yacon tuber extract will have a synergistic effect on hyperlipidemia. These results indicate that MLYT could be a candidate for the improvement of hyperlipidemia.

Anti-obesity Effects of Mulberry Leaf and Yacon Extract in Obese Rats

  • Lim, Yong;Oh, Ji Hye;Park, Un Kyu;Huh, Man Kyu;Hwang, Seock-Yeon
    • Biomedical Science Letters
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    • v.26 no.2
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    • pp.75-84
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    • 2020
  • We evaluated the effect of anti-obesitic activity of MYE (mulberry leaf + Yacon tuber) extracted from Morus alba as muberry leaf and Smallanthus sonchifolia as yacon. 1%, 3%, or 5% of MYE were treated to Sprague-Dawley rats exposed to a high-fat diet. MYE treated rats were suppressed weight during four weeks, and they lost weight significantly after six weeks. Common blood chemistry panels related to liver function revealed significant improvement in the MYE-treated groups. The expression of leptin as indicators for obesity was decreased in perirenal fat. Such results indicate that MYE could be a promising candidate for the improvement of obesity. In addition, MYE effected on deceased glucose metabolism, reducing the activities of glucose-6-phosphate dehydrogenase (G-6-PDH) and glucokinase related to glycogen synthesis. The fatty liver was observed in high-fat diet-treated rats, resulting from increased number of adipose cells and Ito cells. However, this pathologic change was significantly improved by administration of MYE. MYE have significant effects on antioxdative function and glycometabolism against high fat diet. Thereby, it seems that MYE prevent fatty liver by high-fat diet. Thus it is suggested that MYE would be worth being developed as an biofunctional food to prevent undesirable effects caused by obesity.

From genome sequencing to the discovery of potential biomarkers in liver disease

  • Oh, Sumin;Jo, Yeeun;Jung, Sungju;Yoon, Sumin;Yoo, Kyung Hyun
    • BMB Reports
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    • v.53 no.6
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    • pp.299-310
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    • 2020
  • Chronic liver disease progresses through several stages, fatty liver, steatohepatitis, cirrhosis, and eventually, it leads to hepatocellular carcinoma (HCC) over a long period of time. Since a large proportion of patients with HCC are accompanied by cirrhosis, it is considered to be an important factor in the diagnosis of liver cancer. This is because cirrhosis leads to an irreversible harmful effect, but the early stages of chronic liver disease could be reversed to a healthy state. Therefore, the discovery of biomarkers that could identify the early stages of chronic liver disease is important to prevent serious liver damage. Biomarker discovery at liver cancer and cirrhosis has enhanced the development of sequencing technology. Next generation sequencing (NGS) is one of the representative technical innovations in the biological field in the recent decades and it is the most important thing to design for research on what type of sequencing methods are suitable and how to handle the analysis steps for data integration. In this review, we comprehensively summarized NGS techniques for identifying genome, transcriptome, DNA methylome and 3D/4D chromatin structure, and introduced framework of processing data set and integrating multi-omics data for uncovering biomarkers.

Optimization of SWCNT-Coated Fabric Sensors for Human Joint Motion Sensing

  • Cho, Hyun-Seung;Park, Seon-Hyung;Yang, Jin-Hee;Park, Su-Youn;Han, Bo-Ram;Kim, Jin-Sun;Lee, Hae-Dong;Lee, Kang-Hwi;Lee, Jeong-Whan;Kang, Bok-Ku;Chon, Chang-Soo;Kim, Han-Sung;Lee, Joo-Hyeon
    • Journal of Electrical Engineering and Technology
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    • v.13 no.5
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    • pp.2059-2066
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    • 2018
  • This study explored the feasibility of utilizing an SWCNT-coated fabric sensor for the development of a wearable motion sensing device. The extent of variation in electric resistance of the sensor material was evaluated by varying the fiber composition of the SWCNT-coated base fabrics, attachment methods, number of layers, and sensor width and length. 32 sensors were fabricated by employing different combinations of these variables. Using a custom-built experimental jig, the amount of voltage change in a fabric sensor as a function of the length was measured as the fabric sensors underwent loading-unloading test with induced strains of 30 %, 40 %, and 50 % at a frequency of 0.5 Hz. First-step analysis revealed the following: characteristics of the strain-voltage curves of the fabric sensors confirmed that 14 out of 32 sensors were evaluated as more suitable for measuring human joint movement, as they yield stable resistance values under tension-release conditions; furthermore, significantly stable resistance values were observed at each level of strain. Secondly, we analyzed the averaged maximum, minimum, and standard deviations at various strain levels. From this analysis, it was determined that the two-layer sensor structure and welding attachment method contributed to the improvement of sensing accuracy.

Wireless Vibration Measurement System Using a 3-Axial Accelerometer Sensor (3축 가속도 센서 기반의 무선 진동 측정 시스템)

  • Yoo, Ju-Yeon;Park, Geun-Chul;Jeon, Ah-Young;Kim, Cheol-Han;Kim, Yun-Jin;Ro, Jung-Hoon;Jeon, Gye-Rok
    • Journal of Sensor Science and Technology
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    • v.20 no.2
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    • pp.131-136
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    • 2011
  • In this study, a compact wireless vibration measurement system was developed using a 3-axial accelerometer in order to evaluate the vibration stimulation system. A low power microprocessor chip integrated with 2.4 GHz RF transceiver was used for the wireless data communication. To evaluate the system, the frequencies and accelerations from the vibration stimulation system were measured using an LVDT sensor and a vibration measurement system. The average frequency difference by the measurement system was less than 0.1 Hz, and the standard deviation of frequencies estimated by the LVDT sensor and the accelerometer was below 0.08 Hz. The developed system was applied to access a vibration stimulation system for the future study. The average acceleration difference of the central and peripheral point of the stimulation system was less than 0.0005 g(1 g=9.8 $m/s^2$), and the standard deviation of the acceleration was below 0.004 g, which shows the usefulness of the wireless vibration measurement system.