• Journal of Microbiology and Biotechnology
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• v.30 no.6
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• pp.856-867
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• 2020

Vibrio parahaemolyticus is a major gastroenteritis-causing pathogen in many Asian countries. Antimicrobial resistance in V. parahaemolyticus has been recognized as a critical threat to food safety. In this study, we determined the prevalence and incidence of antimicrobial resistance in V. parahaemolyticus in the southern Fujian coast, China. A total of 62 isolates were confirmed in retail aquatic products from June to October of 2018. The serotype O3:K6 strains, the virulence genes tdh and trh, antibiotic susceptibility and molecular typing were investigated. Then plasmid profiling analysis and curing experiment were performed for multidrug-resistant strains. The results showed that the total occurrence of V. parahaemolyticus was 31% out of 200 samples. Five strains (8.1%) out of 62 isolates were identified as the V. parahaemolyticus O3:K6 pandemic clone. A large majority of isolates exhibited higher resistance to penicillin (77.4%), oxacillin (71%), ampicillin (66.1%) and vancomycin (59.7%). Seventy-one percent (44/62) of the isolates exhibited multiple antimicrobial resistance. All 62 isolates were grouped into 7 clusters by randomly amplified polymorphic DNA, and most of the isolates (80.6%) were distributed within cluster A. Plasmids were detected in approximately 75% of the isolates, and seven different profiles were observed. Seventy-six percent (25/33) of the isolates carrying the plasmids were eliminated by 0.006% SDS incubated at 42℃, a sublethal condition. The occurrence of multidrug-resistant strains could be an indication of the excessive use of antibiotics in aquaculture farming. The rational use of antimicrobial agents and the surveillance of antibiotic administration may reduce the acquisition of resistance by microorganisms in aquatic ecosystems.

• Journal of Korean Society of Occupational and Environmental Hygiene
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• v.30 no.3
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• pp.256-269
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• 2020

Objectives: Everyone has been affected in some way by the COVID-19 pandemic, while some workers face threats to their health due to their jobs as well as worries about spreading the virus to intimate family members. With these concerns in mind, this study aims to identify occupations more vulnerable to COVID-19 and suggests the necessity of providing proper control measures against the risks in a timely manner in Korea. Methods: Daily briefing reports by the Korea Centers for Disease Control and Prevention (KCDC) were compiled (n=120) between January 20 and May 31, 2020. A total of 11,486 confirmed cases were included, which were sorted by occasion, area, and occupation. Among them, 2,411 cases were classified with specific occasions and/or areas of infection, while only 544 cases were determined with identifiable occupations. Guidelines for biological hazard management and COVID-19 guidelines for workplaces from domestic and international bodies were enlisted and compared. Results: It is unsurprising to find that healthcare professionals are experiencing the most immediate threat from COVID-19. In addition, service workers with face-to-face practices or indirect contact are also facing high risks. Religion facilities and eating places (dining, drinking bar, café, etc.,) follow. Guidelines and manuals for biological hazards are still lacking in Korea compared to the US and EU. Workplace manuals for managing COVID-19 are neither as comprehensive as the approaches of NIOSH's hierarchy of controls nor inclusive enough for minimizing secondary or tertiary suffering. Conclusions: The COVID-19 crisis is still ongoing and there is no doubt there will be more such events in the future. This analysis suggests that occupational health professionals, amid a pandemic including COVID-19, are urged to anticipate emerging risks related to all sorts of occupations, identify vulnerable workers and working environments, and plan and take actions to protect workers' health.

• Korean Journal of Plant Taxonomy
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• v.47 no.4
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• pp.322-327
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• 2017

We report the distribution of Sparganium subglobosum Morong (Typhaceae) for the first time in Korea. Sparganium subglobosum is readily distinguishable from other Korea Sparganium species by having a short plant height, narrow leaves (${\leq}4mm$), thin inflorescence branches, and a ripe fruiting head globose and ca. 1 cm in diam. The species is under great threat of local extinction due to a recent disturbance of one of only two known distribution sites. Further conservation plans for S. subglobosum and surveys are needed. We provide a revised key to five Sparganium species of Korea, with descriptions, pictures, and figures of S. subglobosum.

• Journal of Life Science
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• v.25 no.6
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• pp.615-623
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• 2015

This study investigated the effects of dissolved cement powder on Zacco koreanus by analyzing morphophysiological changes. The gills exposed to dissolved cement powder developed abnormal shapes in their secondary lamellae and increased numbers of mucous cells after long-term exposure. Additionally, clubbing, edema, and exfoliation of the epithelial cells were observed in the secondary lamellae. In the kidney tissue, the space in Bowman’s capsule was widened, and in the integument tissue the arrangement of the dermis was irregular due to the thinned epidermis. These results suggest that long-term exposure to cement powder can significantly affect morphological change, resulting death. The activities of antioxidant enzymes and LDH tended to increase commensurately with the duration of cement exposure. It was concluded that up-regulated proteins were the stress proteins involved in myofibrillar-protein production and down-regulated proteins were involved in glycolysis and energy metabolism after the integument’s exposure to cement. According to these results dissolved cement powder is a serious threat to the survival of fish because it causes morphological changes and weakens physiological activity in Z. koreanus tissues.

• Genomics & Informatics
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• v.21 no.2
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• pp.19.1-19.13
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• 2023

Liver cancer, particularly hepatocellular carcinoma (HCC), poses a significant global threat to human lives. To advance the development of innovative diagnostic and treatment approaches, it is essential to examine the hidden features of HCC, particularly its 3D genome architecture, which is not well understood. In this study, we investigated the 3D genome organization of four HCC cell lines-Hep3B, Huh1, Huh7, and SNU449-using in situ Hi-C and assay for transposase-accessible chromatin sequencing. Our findings revealed that HCC cell lines had more long-range interactions, both intra-and interchromosomal, compared to human mammary epithelial cells (HMECs). Unexpectedly, HCC cell lines displayed cell line-specific compartmental modifications at the megabase (Mb) scale, which could potentially be leveraged in determining HCC subtypes. At the sub-Mb scale, we observed decreases in intra-TAD (topologically associated domain) interactions and chromatin loops in HCC cell lines compared to HMECs. Lastly, we discovered a correlation between gene expression and the 3D chromatin architecture of SLC8A1, which encodes a sodium-calcium antiporter whose modulation is known to induce apoptosis by comparison between HCC cell lines and HMECs. Our findings suggest that HCC cell lines have a distinct 3D genome organization that is different from those of normal and other cancer cells based on the analysis of compartments, TADs, and chromatin loops. Overall, we take this as evidence that genome organization plays a crucial role in cancer phenotype determination. Further exploration of epigenetics in HCC will help us to better understand specific gene regulation mechanisms and uncover novel targets for cancer treatment.

• Advances in nano research
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• v.15 no.4
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• pp.355-366
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• 2023

Biological corrosion, a crucial aspect of metal degradation, has received limited attention despite its significance. It involves the deterioration of metals due to corrosion processes influenced by living organisms, including bacteria. Soil represents a substantial threat to pipeline corrosion as it contains chemical and microbial factors that cause severe damage to water, oil, and gas transmission projects. To combat fouling and corrosion, corrosion inhibitors are commonly used; however, their production often involves expensive and hazardous chemicals. Consequently, researchers are exploring natural and eco-friendly alternatives, specifically nano-sized products, as potent corrosion inhibitors. This study aims to environmentally synthesize silver nanoparticles using an extract from Lagoecia cuminoides L and evaluate their effectiveness in preventing biological corrosion of buried pipes in soil. The optimal experimental conditions were determined as follows: a volume of 4 ml for the extract, a volume of 4 ml for silver nitrate (AgNO3), pH 9, a duration of 60 minutes, and a temperature of 60 degrees Celsius. Analysis using transmission electron microscopy confirmed the formation of nanoparticles with an average size of approximately 28 nm, while X-ray diffraction patterns exhibited suitable peak intensities. By employing the Scherer equation, the average particle size was estimated to be around 30 nm. Furthermore, antibacterial studies revealed the potent antibacterial activity of the synthesized silver nanoparticles against both aerobic and anaerobic bacteria. This property effectively mitigates the biological corrosion caused by bacteria in steel pipes buried in soil.

• Korean Journal of Ichthyology
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• v.32 no.1
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• pp.1-7
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• 2020

Investigations of distribution status and extinction threat evaluation of the Korean endemic species, Iksookimia yongdokensis were undertaken from 2017 to 2018. Among the 22 streams and 97 sampling sites investigated during the study period, samples of I. yongdokensis were collected from 9 streams at 37 sites (from Daejongcheon Stream of Gyeongju-si to Songcheon Stream of Yeongdeok-gun). The appearance of I. yongdokensis was relatively common in streams such as Hyeongsangang River (15 stations), Yeongdeok Oshipcheon Stream (4 stations), Gokgangcheon Stream (4 stations), Chuksancheon Stream (3 stations) and Daejongcheon Stream (3 stations). The main habitat of I. yongdokensis was in pools on flat-land in streams of clean water with slow velocity, and with pebble, gravel and sand bottoms. Previous records of the appearance of I. yongdokensis, indicate they were first seen at seven stations including Jangsacheon Stream, but they were not present in Songcheon Stream. Compared to our results there is evidence as noted for a 38.9% reduction in occupancy within 3 generations (10.5 years), and a decline inhabitat quality. Therefore, I. yongdokensis is now considered vulnerable (VU A2ace) based on the IUCN Red List categories and criteria. The main reasons for the decline were assumed to be dry weathering in the river, the introduction and diffusion of exotic fish species Micropterus salmoides, and river refurbishment project.

• Korean Journal of Ichthyology
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• v.30 no.2
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• pp.100-106
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• 2018

The distribution aspect and extinction threat evaluation of the endangered species, Rhodeus pseudosericeus were investigated from 2012 to 2017 in Korea for the subject of this study. The number of appearance sites in the past literature of available and identified R. pseudosericeus was 26. During the study period, the samples of R. pseudosericeus were collected in 44 sites (Hangang River 35 sites, Sapgyocheon Stream 4 sites, Daecheoncheon Stream 5 sites) among the noted 214 sampling stations investigated. Among these, the newly appearance streams were Ilricheon Stream, Samsancheon Stream, Bangyecheon Stream and Hanpocheon Stream in the Hangang River. In addition, the habitats and populations in the upper Seomgang River (Hoengseong Dam), lower Heukcheon Stream, Muhancheon Stream and Daecheoncheon Stream decreased due to dam construction, river work, water pollution, and the spread of the exotic species Micropterus salmoides. The main habitat of R. pseudosericeus was the middle-upper stream of clean water with slow water velocity, sand-pebble bottoms and lots of aquatic plants. Given this evidence as noted for the 30.2% reduction in occupancy within 10 years, due to the qualitative decline of habitat, the overfishing risk of ornamental fish and the spread of M. salmoides, in this case R. pseudosericeus is considered to be Vulnerable (VU A2cde) based on the IUCN Red List categories and criteria.

• Korean Journal of Ichthyology
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• v.31 no.1
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• pp.16-22
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• 2019

Investigations on the study of the distribution aspects and extinction threat evaluation of the Korean endemic species, Iksookimia pacifica were done from 2017 to 2018 in Korea. During the study period, the samples of I. pacifica were collected in 17 streams, 46 sites (from Baebongcheon Stream of Goseong-gun to Gunsuncheon Stream of Gangneung-si) among the noted 33 streams and 104 sampling sites investigated. The population size of I. pacifica was relatively large in streams such as Bukcheon, Baebongcheon, Hwasangcheon, Cheonjincheon, Ohhocheon Stream etc., but the population size was small in streams such as Sacheoncheon, Namcheon, Gangneung Namdaecheon Stream etc. The main habitat of I. pacifica was the downstream pool of clean water with slow velocity and sand bottoms, and their sensibility was estimated to be due to river work and water pollution. Comparing the previous records of the appearance of I. pacifica, they were first seen in Sampocheon Stream, but they did not appear in Jusucheon, Jeoncheon, Samcheok Osipcheon Stream. Given this evidence as noted for the 19.5% reduction in occupancy within 3 generations, in small appearance range ($1,343km^2$) and small occupancy area ($184km^2$), the number of locations were many (18) and the population was relatively large within the range of habitat. Therefore, I. pacifica is now considered a Near Threatened (NT) based on the IUCN Red List categories and criteria.

• Korean Journal of Plant Taxonomy
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• v.42 no.3
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• pp.222-246
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• 2012

Present paper is an outcome of a four-year floristic survey work carried out in Upper Siang district of eastern Himalayan region in India which is also recognized as one of the 39 known 'Biodiversity Hot-Spots' of the world. We present here with a vegetation analysis of this area along with a checklist of 1,003 taxa belonging to 110 families, 529 genera, 994 species, 1 subspecies and 8 varieties of the angiosperms. Besides, one new species, 3 new records to India and 82 endemic species were also recorded. The diversity of herbs and shrubs were found higher than the tree species. Orchidaceae was found the most dominant family followed by Poaceae and Fabaceae. Many threatened plants have also been reported from the area. However, rapid urbanization and Jhum cultivation are imposing direct threat to the natural vegetation. We suggest some conservation measures that could help protecting this natural heritage.