• Title/Summary/Keyword: Biological information

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Quali-Quantitative Analysis of Flavonoids for Mulberry Leaf and Fruit of 'Suhyang'

  • Ju, Wan-Taek;Kwon, O-Chul;Lee, Min-Ki;Kim, Hyun-Bok;Sung, Gyoo-Byung;Kim, Yong-Soon
    • Korean Journal of Environmental Agriculture
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    • v.36 no.4
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    • pp.249-255
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    • 2017
  • BACKGROUND: Globally, mulberry (Morus sp.) is exploited for feeding leaf to silkworms in order to obtain silk fiber or for animal feedstock production. Also, mulberry fruit is known to a by-product that was produced from mulberry tree after harvesting leaves for silkworm rearing, as a yield and consumption of mulberry fruit was increased, it has been fixing to a newincome crop. Mulberry leaves and fruits are used for the health benefits of human beings. Mulberry contains various bioactive components, such as alkaloids and flavonoids. Mulberry flavonoids are an important part of the diet because of their effects on human nutrition. The flavonoids in mulberry leaf and fruit of 'Suhyang'(Morus alba L.) were determined. METHODS AND RESULTS: Flavonoids for mulberry leaf and fruit of 'Suhyang' were analysed using ultrahigh performance liquid chromatography coupled with diode array detection and quadrupole time-of-flight mass spectrometry (UPLC-DAD-QTOF/MS)technique. An UPLC-DAD-QTOF/MS system was used, and identification of mulberry leaves constituents was carried out on the basis of the complementary information obtained from LC spectra, MS ions, and MS/MS fragments. The mulberry leaf (16 flavonoids) and fruit (9 flavonoids) were isolated and analyzed from Suhyang using UPLC-DAD-QTOF/MS chromatogram. To the best of our knowledge, Quercetin 3-O-(6"-O-malonyl) glucoside and quercetin 3-O-rutinoside (rutin) was detected on the highest content in leaf and fruit, respectively and further research will be devoted to evaluate their biological activity. CONCLUSION: Obtaining information about the concentration of functional materials in mulberry leaves could contribute to the development and promotion of processed, functional products and offer possible industrial use of 'Suhyang', holding promises to enhance the overall profitability of sericulture.

Development of Species Distribution Models and Evaluation of Species Richness in Jirisan region (지리산 지역의 생물종 분포모형 구축 및 종풍부도 평가)

  • Kwon, Hyuk Soo;Seo, Chang Wan;Park, Chong Hwa
    • Journal of Korean Society for Geospatial Information Science
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    • v.20 no.3
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    • pp.11-18
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    • 2012
  • Increasing concern about biodiversity has lead to a rise in demand on the spatial assessment of biological resources such as biodiversity assessment, protected area selection, habitat management and restoration in Korea. The purpose of this study is to create species richness map through data collection and modeling techniques for wildlife habitat assessment. The GAM (Generalized Additive Model) is easy to interpret and shows better relationship between environmental variables and a response variable than an existing overlap analysis and GLM (Generalized Linear Model). The study area delineated by a large watershed contains Jirisan national park, Mt. Baekun and Sumjin river with three kinds of protected areas (a national park, a landscape ecology protected area and an otter protected area). We collected the presence-absence data for wildlife (mammals and birds) using a stratified random sampling based on a land cover in the study area and implemented natural and socio-environmental data affecting wildlife habitats. After doing a habitat use analysis and specifying significant factors for each species, we built habitat suitability models using a presence-absence model and created habitat suitability maps for each species. Biodiversity maps were generated by taxa and all species using habitat suitability maps. Significant factors affecting each species habitat were different according to their habitat selection. Although some species like a water deer or a great tit were distributed at the low elevation, most potential habitats for mammals and birds were found at the edge of a national park boundary or near a forest around the medium elevation of a mountain range. This study will be used for a basis on biodiversity assessment and proected area selection carried out by Ministry of Environment.

Analysis and Prediction for Spatial Distribution of Functional Feeding Groups of Aquatic Insects in the Geum River (금강 수계 수서곤충 섭식기능군의 공간분포 분석 및 예측)

  • Kim, Ki-Dong;Park, Young-Jun;Nam, Sang-Ho
    • Journal of the Korean Association of Geographic Information Studies
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    • v.15 no.1
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    • pp.99-118
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    • 2012
  • The aim of this study is to define a correlation between spatial distribution characteristics of FFG(Functional Feeding Groups) of aquatic insects and related environmental factors in the Geum River based on the theory of RCC(River Continuum Concept). For that objective we had used SMRA(Stepwise Multiple Regression Analysis) method to analyze close relationship between the distribution of aquatic insects and the physical and chemical factors that may affect their inhabiting environment in the study area. And then, a probabilistic method named Frequency Ratio Model(FRM) and spatial analysis function of GIS were applied to produce a predictive distribution map of biota community considering their distribution characteristics according to the environmental factors as related variables. As a result of SMRA, the values of decision coefficient for factors of elevation, stream width, flow velocity, conductivity, temperature and percentage of sand showed higher than 0.5. Therefore these 6 environmental factors were considered as major factors that might affect the distribution characteristics of aquatic insects. Finally, we had calculated RMSE(Root Mean Square Error) between the predicted distribution map and prior survey database from other researches to verify the result of this study. The values of RMSE were calculated from 0.1892 to 0.4242 according to each FFG so we could find out a high reliability of this study. The results of this study might be used to develop a new estimation method for aquatic ecosystem with macro invertebrate community and also be used as preliminary data for conservation and restoration of stream habitats.

A Study about a Short-form of the Sasang Constitution Questionnaire for Patient (SSCQ-P) (환자용 사상체질설문지(SSCQ-P) 축소화에 관한 연구)

  • Jeong, Jong-Hun;Jeon, Soo-Hyung;Na, Young-Ju;Kang, Seok-Hwan;Dong, Sang-Oak;Lee, Si-Woo;Kim, Kyu-Kon;Kim, Jong-Won;Kim, Sang-Hyuk
    • Journal of Sasang Constitutional Medicine
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    • v.26 no.4
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    • pp.339-349
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    • 2014
  • Objectives This study was performed to make a short-form of Sasang Constitution Questionnaire for Patient(SSCQ-P). Methods In order to select important questions of SSCQ-P, we got advice from 10 professors of Oriental Medicine. As a result, we chose 37 questions. In addition, we selected 69 questions which had been used more than 12 times in SSCQ-P as the variable. We used some statistical methods to reduce questions. Finally, a total of 40 questions were selected. To find diagnostic accuracy rate of this short-form, discriminant analysis was performed. We used 1378 cases which was collect ed from February 2008 to June 2013 by online system(Sasang-medi data which has selected by web site, http://www.sasangmedi.or.kr), and 68 cases which was collected from November 2006 to September 2007 by the research "Construction of a biological information collection system for the Constitutional scientific diagnosis"(Korea Constitutional Multicenter Bank data, KCMB data) Results We made a short-form of SSCQ-P consisting of 40 questions. Diagnostic accuracy rate of short-form is 66.18% using Sasang-medi data, and 42.65% using KCMB data. Conclusions More cases are needed to improve the diagnostic accuracy rate of this short-form.

A Method of Identifying Disease-related Significant Pathways Using Time-Series Microarray Data (시간열 마이크로어레이 데이터를 이용한 질병 관련 유의한 패스웨이 유전자 집합의 검출)

  • Kim, Jae-Young;Shin, Mi-Young
    • Journal of the Institute of Electronics Engineers of Korea CI
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    • v.47 no.5
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    • pp.17-24
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    • 2010
  • Recently the study of identifying bio-markers for disease diagnosis and prognosis has been actively performed. In particular, lots of attentions have been paid to the finding of pathway gene-sets differentially expressed in disease patients rather than the finding of individual gene markers. In this paper we propose a novel method to identify disease-related pathway gene-sets based on time-series microarray data. For this purpose, we firstly compute individual gene scores by the using maSigPro (microarray Significant Profiles) and then arrange all the genes in the decreasing order of the corresponding gene scores. The rank of each gene in the entire list is used to evaluate the statistical significance of candidate gene-sets with Wilcoxson rank sum test. For the generation of candidate gene-sets, MSigDB (Molecular Signatures Database) pathway information has been employed. The experiment was conducted with prostate cancer time-series microarray data and the results showed the usefulness of the proposed method by correctly identifying 6 out of 7 biological pathways already known as being actually related to prostate cancer.

Development of Early Forecasting System using GIS and Prediction Model related to the Cyanobacterial Blooming in the Daecheong Reservoir of Korea (예보모델과 GIS를 기반한 대청호의 남조류 발생에 대한 조기예보시스템 개발)

  • Kim, Man-Kyu;Park, Jong-Chul;Kim, Kwang-Hoon
    • Journal of the Korean Association of Geographic Information Studies
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    • v.10 no.2
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    • pp.91-102
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    • 2007
  • To anticipate and respond to harmful algae produced in a big artificial lake like Daecheong reservoir, development of a regional analysis computer system using GIS or RS technique is needed in addition to biological and chemical research. The purpose of this study is to develop a cyanobacterial blooming prediction model to prevent harmful algae produced in Daecheong reservoir and construct an early forecasting system based on GIS. For this purpose this paper examines previous studies related to the relationship between cyanobacteria and environmental factors in Daecheong reservoir and selects precipitation and air temperature as two important environmental factors for the development of cyanobacterial blooming prediction model. Data used in this study are water quality and weather data for three water regions in Daecheong reservoir between 2000 and 2004. Based on qualitative correlation analysis between cyanobacteria and environmental factors, this paper presents a Rump model which enables us to predict cyanobacteria in water regions of Daecheong reservoir. Under this model the prediction of initial occurrence time and growth period of cyanobacteria are possible. The model is also applied to the GIS-based early forecasting system for cyanobacteria, and finally a GIS which can predict cyanobacteria produced in Daecheong reservoir and can manage the related data is developed.

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Evaluation for Optimal HUD Location on a Train Using EEG (뇌파를 이용한 열차 최적의 HUD위치 평가)

  • Wang, Chang-Won;Kim, Yong-Kyu;Min, Se-Dong
    • The Journal of Korean Institute of Communications and Information Sciences
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    • v.39C no.11
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    • pp.985-993
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    • 2014
  • This paper suggested a new evaluation method for optimal HUD position through a correlation based on between biological signal as and statistical analysis which using (Electroencephalogram, EEG) and ANOVA. This experiment was conducted two kinds of method to evaluate the optimal HUD position. At first, visual stimulus suggested from six different positions(the top and the bottom of the left, the top and the bottom of the center and the top and the bottom of the right on the screen) in laboratory and an object image was shown for 30 seconds in a screen which has $235{\times}197cm2$ size. And second, HUD image was configured from three different positions and an object image was shown for 30 seconds in a screen. EEG, which used ${\alpha}$-wave and ${\beta}$-wave for evaluate an emotional stability, were measured from Fp1, Fp2, F7 and F8 channel based on ten to twenty electrode system. From the result in laboratory, F7 ${\beta}$-wave was shown statistically significant to significance probability of 0.006 and between ${\alpha}$-wave and ${\beta}$-wave were showed a negative correlation(r=-0.190). Also, Both the top of left and the bottom of center were showed lower ${\beta}$-wave than the bottom of right. From the result in railway simulator, Fp1 ${\beta}$-wave was appeared statistically significant as significance probability of 0.033 and it was showed lower ${\beta}$-wave than center. The outcome of this study will be helpful about evaluation of optimal HUD position through correlation between alpha wave and beta wave.

A Critical Review of "Type Specimens Collected from Korea at the Herbarium of the University of Tokyo" and "Korean type Specimens Deposited in Foreign Herbaria and Museums" ("Type Specimens Collected from Korea at the Herbarium of the University of Tokyo"와 "Korean Type Specimens Deposited in Foreign Herbaria and Museums"의 오류에 대한 비평)

  • Eom, Hyun-Joo;Chang, Chin-Sung;Kim, Hui
    • Journal of Korean Society of Forest Science
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    • v.99 no.4
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    • pp.447-469
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    • 2010
  • The recent publications of two major works from Ministry of Environment and Korea National Arboretum (Type specimens collected from Korea at the herbarium of the University of Tokyo, five volumes) and National Institute of Biological Resources (Korean type specimens deposited in foreign herbaria and museums, two volumes excluding other animal groups) on Korean vascular plants have resulted in discrepancies needing either correction or clarification. The former published the results of a portion of T. Nakai's collections deposited at TI, while the latter produced the results about collections of G. Koidzumi's, J. Ohwi's, and S. Kitamura's at Kyoto University and of E. H. Wilson's and H. Leveille's at Harvard University. Consequently some omissions, discrepancies, and conflicts resulted, such as the inclusion of conflicting designations of lectotype, isotype, syntype or holotype, erroneous citations of publications, and misinformation. Suh et al.'s publications about type specimens of Korean plants deposited at TI showed 47 conflicting typifications and 20 typographical and other errors. Type information offered by Yim et al. were discussed, and 75 conflicting typification and 30 typographical and other errors from these two volumes were also brought to notice. It is clear that Suh et al. and Yim et al. merely provided type information without consulting original description of each plant species. It is apparent that all these conflicting designation of types, erroneous citations of publications, and other types of misinformation were as a result of the disregard of original citation and the ignorance of basic type concept.

Development of Livestock Traceability System Based on Implantable RFID Sensor Tag with MFAN (MFAN/RFID 생체 삽입형 센서 태그 기반 가축 이력 관리 시스템 개발)

  • Won, Yun-Jae;Kim, Young-Han;Lim, Yongseok;Moon, Yeon-Kug;Lim, Seung-Ok
    • The Journal of Korean Institute of Communications and Information Sciences
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    • v.37C no.12
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    • pp.1318-1327
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    • 2012
  • With the recent increased risk of livestock disease spread and human infection, livestock disease control has become very important. Consequently, there has been an increased attention on an implantable real-time monitoring and traceability system for individual cattle. Therefore, we have developed a robust monitoring and traceability system based on an implantable MFAN/RFID sensor tag. Our design combines the MFAN technology that is capable of robust wireless communication within cattle sheds and the 900MHz RFID technology that is capable of wireless communication without battery. In MFAN/RFID implantable sensor tag monitoring system, UHF sensor tag is implanted under the skin and accurately monitors the body temperature and biological changes without being affected by external environment. In order to acquire power needed by the tag, we install a MFAN/RFID tranceiver on the neck of cattle. The MFAN coordinator passes through the MFAN node and the RFID-reader-combined MFAN/RFID transceiver and transmits/receives the data and power for the sensor tag. The data stored in the MFAN coordinator is transmitted via the internet to the livestock history monitoring system, where it is stored and managed. By developing this system, we hope to alleviate the problems related to livestock disease control.

A Study on the Ecological Restoration Strategies for the Disturbed Landscapes (경관훼손지의 생태적 복구방안에 관한 연구)

  • Kim, Nam-Choon
    • Journal of the Korean Society of Environmental Restoration Technology
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    • v.1 no.1
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    • pp.28-44
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    • 1998
  • This study was conducted to suggest the ecological restoration strategies for the disturbed landscapes by theoretical study. Especially, it is aimed to suggest three objectives for restoration by using native plants ; (1) prevention or reduction of wind and water erosion, (2) provision of food and cover for variety of animal species, (3) improvement of the visual or aesthetic quality of disturbed sites. The main results were summarized as follows. 1. Cooperation between restoration ecologists and restoration practitioners is needed to delineate a scientific approach to restoration ; (1) Being aware of published literature that describes similar work and/or establish general principles. (2) Preparedness to carry out proper experiments to test ideas. (3) Preparedness to monitor fundamental parameters in a restoration scheme. (4) Providing information about the behavior of species. (5) Publish results. 2. There are three models of succession in theories of plant succession. The tolerance and facilitation models were recommended to ecological restoration. The inhibition model applies in most secondary succession, but the actual species which are introduced first may inhibit the germination and growth of slower-growing species, or they may prevent the growth of other species whose propagules arrive later. 3. The objectives of erosion control, wildlife habitat provision, and visual quality improvement are not mutually exclusive. However, many revegetation practices in the past have emphasized one of these aspects at the expense of the others. 4. A native plant community can be the model of ecological restoration. By stylization/abstraction of native plant community, trying to learn the most essential characteristics of community types - environmental factors ; dominant, prevalent, and "visual essence" species composition - in order to use such information in restoration. 5. After developing mass/spaces plan, match plant communities to the mass/space plan. In utilizing community grouping, there needs aesthetic ability to understand design elements. 6. Several hydrophytes such as Pennisetum saccharifluous, Themeda triandra, Cirsium pendulum show relatively good germination rates. In case of mesophytes and xerophytes, Arundinella hina, Artemisia princeps, Oenothera odorata and legumes seem to have quick-germinating abilities at barren sites. Pinus thunbergii, Rhus chinensis, Evodia daniellii, Alnus firma and Albizzia julibrissin can be considered as "late succession" woody plants because they show low germinating rates and slow growing habitat. 7. The seeds used for restoration should be collected within a certain radius of where it will be planted. Consideration in genetic issues in the collection and use of germplasm can increase the odds for successful restoration efforts. 8. The useful model in the "drift" pattern occurs so abundantly in naturally evolving landscapes. As one species diminishes in density, a second or third species are increased. Thus, dynamic interactions between species are created. Careful using of "drift phenomenon" in planting was recommended. 9. Virtually no stand of vegetation today is immune from the introduction and/or spreading of exotic species. Therefore, the perpetuation of a restored sites requires conscious monitoring and management. Thus, management would be the most important process in ecological restoration. 10. In order to keep the sites "natural", alternative management strategies would be applied in management ; Atenative management strategies are decelerating successional process, accelerating successional processes or modifying species composition. As management tools, mechanical, chemical, biological or environmental factor manipulation, e.g., fire could be used.

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