• Title/Summary/Keyword: Biological clock

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The Circadian Rhythm Variation of Pain in the Orofacial Region

  • Kim, Moon Jong;Chung, Jin Woo;Kho, Hong-Seop;Park, Ji Woon
    • Journal of Oral Medicine and Pain
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    • v.40 no.3
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    • pp.89-95
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    • 2015
  • All living organisms have a biological clock that orchestrates every biological process and function, and this internal clock operates following a circadian rhythm. This biological clock is known to influence various clinical indicators such as blood pressure and body temperature. Also, the fluctuation of signs and symptoms of diseases including pain disorders are affected by circadian rhythm. It has been reported that the pain intensity of various somatic and neuropathic pain disorders show unique pain patterns that depend on the passage of time. The generation of pain patterns could be explained by extrinsic (e.g., physical activity, tactile stimulation, ambient temperature) and also intrinsic factors (neural and neuroendocrine modulation) that are related to the circadian rhythm. It is important to recognize and identify the individual pain pattern in pain therapy to approve treatment outcome. Moreover, chronotherapeutics which considers pain patterns and pharmacokinetics in context of the circadian rhythm could produce greater analgesia in response to medication. However, only a limited number of studies handle the issue of pain patterns according to circadian rhythm and chronotherapeutics in the orofacial region. The present review intends to reflect on the most recent and relevant data concerning the bidirectional relation between pain disorders of the orofacial region and circadian patterns.

RNA-Seq Analysis of the Arabidopsis Transcriptome in Pluripotent Calli

  • Lee, Kyounghee;Park, Ok-Sun;Seo, Pil Joon
    • Molecules and Cells
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    • v.39 no.6
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    • pp.484-494
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    • 2016
  • Plant cells have a remarkable ability to induce pluripotent cell masses and regenerate whole plant organs under the appropriate culture conditions. Although the in vitro regeneration system is widely applied to manipulate agronomic traits, an understanding of the molecular mechanisms underlying callus formation is starting to emerge. Here, we performed genome-wide transcriptome profiling of wild-type leaves and leaf explant-derived calli for comparison and identified 10,405 differentially expressed genes (> two-fold change). In addition to the well-defined signaling pathways involved in callus formation, we uncovered additional biological processes that may contribute to robust cellular dedifferentiation. Particular emphasis is placed on molecular components involved in leaf development, circadian clock, stress and hormone signaling, carbohydrate metabolism, and chromatin organization. Genetic and pharmacological analyses further supported that homeostasis of clock activity and stress signaling is crucial for proper callus induction. In addition, gibberellic acid (GA) and brassinosteroid (BR) signaling also participates in intricate cellular reprogramming. Collectively, our findings indicate that multiple signaling pathways are intertwined to allow reversible transition of cellular differentiation and dedifferentiation.

Molecular Analysis of Growth Factor and Clock Gene Expression in the Livers of Rats with Streptozotocin-Induced Diabetes

  • Kim, Joo-Heon;Shim, Cheol-Soo;Won, Jin-Young;Park, Young-Ji;Park, Soo-Kyoung;Kang, Jae-Seon;Hong, Yong-Geun
    • Reproductive and Developmental Biology
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    • v.33 no.3
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    • pp.163-169
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    • 2009
  • Many biological systems are regulated by an intricate set of feedback loops that oscillate with a circadian rhythm of roughly 24 h. This circadian clock mediates an increase in body temperature, heart rate, blood pressure, and cortisol secretion early in the day. Recent studies have shown changes in the amplitude of the circadian clock in the hearts and livers of streptozotocin (STZ)-treated rats. It is therefore important to examine the relationships between circadian clock genes and growth factors and their effects on diabetic phenomena in animal models as well as in human patients. In this study, we sought to determine whether diurnal variation in organ development and the regulation of metabolism, including growth and development during the juvenile period in rats, exists as a mechanism for anticipating and responding to the environment. Also, we examined the relationship between changes in growth factor expression in the liver and clock-controlled protein synthesis and turnover, which are important in cellular growth. Specifically, we assessed the expression patterns of several clock genes, including Per1, Per2, Clock, Bmal1, Cry1 and Cry2 and growth factors such as insulin-like growth factor (IGF)-1 and -2 and transforming growth factor (TGF)-${\beta}1$ in rats with STZ-induced diabetes. Growth factor and clock gene expression in the liver at 1 week post-induction was clearly increased compared to the level in control rats. In contrast, the expression patterns of the genes were similar to those observed after 5 weeks in the STZ-treated rats. The increase in gene expression is likely a compensatory change in response to the obstruction of insulin function during the initial phase of induction. However, as the period of induction was extended, the expression of the compensatory genes decreased to the control level. This is likely the result of decreased insulin secretion due to the destruction of beta cells in the pancreas by STZ.

Performance evaluation of Digital Beamforming Method Using Sampled - Delay Focusing(SDF) (Sampled Delay Focusing(SDF)을 이용한 디지털 빙포밍 방법에 대한 성능 평가)

  • Lee, Y.H.;Ahn, Y.B.
    • Proceedings of the KOSOMBE Conference
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    • v.1997 no.11
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    • pp.567-570
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    • 1997
  • In a conventional digital beamformer received signal were sampled at least Nyquist rate of its maximum frequency. But it is wide band signal and its coherent sum must be obtained, the sampling clock of about $8f_o$ and $16f_o$ is necessary or high quality images. This paper described how image qualities are varied according to sampling clock. Mainly, we compared the SDF(Sampled Delay Focusing) that had maximum precision of $8f_o$ with $16f_o$ sampling system and analyze its characteristics.

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TTF-1 Expression in PACAP-expressing Retinal Ganglion Cells

  • Son, Young June;Park, Jeong Woo;Lee, Byung Ju
    • Molecules and Cells
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    • v.23 no.2
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    • pp.215-219
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    • 2007
  • In mammals light input resets the central clock of the suprachiasmatic nucleus by inducing secretion of pituitary adenylate cyclase-activating polypeptide (PACAP) from retinal ganglion cells (RGCs). We previously showed that thyroid transcription factor 1 (TTF-1), a homeodomain-containing transcription factor, specifically regulates PACAP gene expression in the rat hypothalamus. In the present study we examined the expression of TTF-1 in PACAP-synthesizing retinal cells. Fluorescence in situ hybridization (FISH) showed that it is abundantly expressed in RGCs of the superior region of the retina, but in only a small subset of RGCs in the inferior region. Double FISH experiments revealed that TTF-1 is exclusively expressed in PACAP-producing RGCs. These results suggest that TTF-1 plays a regulatory role in PACAP-expressing retinal ganglion cells.

A Study on the Bit-slice Signal Processor for the Biological Signal Processing (생체 신호처리용 Bit-slice Signal Processor에 관한 연구)

  • Kim, Yeong-Ho;Kim, Dong-Rok;Min, Byeong-Gu
    • Journal of Biomedical Engineering Research
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    • v.6 no.2
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    • pp.15-22
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    • 1985
  • We have developed a microprogramir!able signal processor for real-time ultrasonic signal processing. Processing speed was increased by the parallelism in horizontal microprogram using 104bits microcode and the Pipelined architecture. Control unit of the signal processor was designed by microprogrammed architec- ture and writable control store (WCS) which was interfaced with host computer, APPLE- ll . This enables the processor to develop and simulate various digital signal processing algorithms. The performance of the processor was evaluated by the Fast Fourier Transform (FFT) program. The execution time to perform 16 bit 1024 points complex FF7, radix-2 DIT algorithm, was about 175 msec with IMHz master Clock. We can use this processor to Bevelop more efficient signal processing algorithms on the biological signal processing.

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Computer Application to ECG Signal Processing

  • Okajima, Mitsuharu
    • Journal of Biomedical Engineering Research
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    • v.6 no.2
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    • pp.13-14
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    • 1985
  • We have developed a microprogramir!able signal processor for real-time ultrasonic signal processing. Processing speed was increased by the parallelism in horizontal microprogram using 104bits microcode and the Pipelined architecture. Control unit of the signal processor was designed by microprogrammed architec- ture and writable control store (WCS) which was interfaced with host computer, APPLE- ll . This enables the processor to develop and simulate various digital signal processing algorithms. The performance of the processor was evaluated by the Fast Fourier Transform (FFT) program. The execution time to perform 16 bit 1024 points complex FF7, radix-2 DIT algorithm, was about 175 msec with IMHz master Clock. We can use this processor to Bevelop more efficient signal processing algorithms on the biological signal processing.

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Divergence time estimation of an ancient relict genus Mankyua (Ophioglossaceae) on the young volcanic Jejudo Island in Korea

  • GIL, Hee-Young;KIM, Seung-Chul
    • Korean Journal of Plant Taxonomy
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    • v.48 no.1
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    • pp.1-8
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    • 2018
  • Mankyua chejuense is the only member of the monotypic genus Mankyua (Ophioglossaceae) and is endemic to Jejudo Island, Korea. To determine the precise phylogenetic position of M. chejuense, two cpDNA regions of 42 accessions representing major members of lycophytes are obtained from GenBank and analyzed using three phylogenetic analyses (maximum parsimony, maximum likelihood, and Bayesian inference). In addition, the divergence time is estimated based on a relaxed molecular clock using four fossil calibration points. The phylogenetic position of Mankyua still appears to be uncertain, representing either the earliest diverged lineage within Ophioglossaceae or a sister to the clade containing Ophioglossum and Helminthostachys. The most recent common ancestor of Ophioglossaceae and its sister lineage, Psilotum, was estimated to be 256 Ma, while the earliest divergence of Mankyua was estimated to be 195 Ma in the early Jurassic.