• Korean Journal of Ichthyology
• /
• v.30 no.2
• /
• pp.107-113
• /
• 2018

To observe species composition and seasonal variation of fish in the coastal area, monthly underwater visual census were conducted from October 2016 to September 2017 in Tongyeong, Korea. A total of 5,358 individuals belong to 45 species were observed during the study. Perciforme fish were the most dominant (29 species), followed by Scorpaeniformes (8 species), Tetraodontiformes (3 species). The most dominant species is Sebastes inermis (19.2%), and followed by Rudarius ercodes (18.5%). Thirty three species with the highest abundance were observed in October 2016 and only 4 species were observed in February 2017. Among three subtropical fishes, such as Chaetodontoplus septentrionalis, Labroides dimidiatus, and Ostracion cubicus, the latter 2 species were firstly observed in the southern coast of Korea. Compared with the previous studies using conventional tools such as beam trawl and seine net for fish collection, underwater visual census is much more efficient way to investigate fish diversity and assemblages in coastal waters.

• Journal of Ecology and Environment
• /
• v.41 no.10
• /
• pp.290-301
• /
• 2017

Background: Forest edges create distinctive ecological space as adjacent constituents, which distinguish between different ecosystems or land use types. These edges are made by anthropogenic or natural disturbance and affects both abiotic and biotic factors gradually. This study was carried out to assess edge effects on disturbed landscape at the pine-dominated clear-cut area in a genetic resources reserve in Uljin-gun, eastern Korea. This study aims to estimate the distance of edge influence by analyzing changes of abiotic and biotic factors along the distance from forest edge. Further, we recommend forest management strategy for sustaining healthy forest landscapes by reducing effects of deforestation. Results: Distance of edge effect based on the abiotic factors varied from 8.2 to 33.0 m. The distances were the longest in $Mg^{2+}$ content and total nitrogen, $K^+$, $Ca^{2+}$ contents, canopy openness, light intensity, air humidity, $Na^+$ content, and soil temperature followed. The result based on biotic factors varied from 6.8 to 29.5 m, coverage of tree species in the herb layer showed the longest distance and coverage of shrub plant in the herb layer, evenness, species diversity, total coverage of herb layer, and species richness followed. As the result of calculation of edge effect by synthesizing 26 factors measured in this study, the effect was shown from 11.0 m of the forest interior to 22.4 m of the open space. In the result of stand ordination, Rhododendron mucronulatum, R. schlippenbachii, and Fraxinus sieboldiana dominated arrangement of forest interior sites and Quercus mongolica, Vitis amurensis, and Rubus crataegifolius dominated spatial distribution of the open area plots. Conclusions: Forest interior habitat lies within the influence of both abiotic and biotic edge effects. Therefore, we need a forest management strategy to sustain the stability of the plant and further animal communities that depend on its stable conditions. For protecting forest interior, we recommend selective logging as a harvesting method for minimizing edge effects by anthropogenic disturbance. In fact, it was known that selective logging contributes to control light availability and wind regime, which are key factors affecting microclimate. In addition, ecological restoration applying protective planting for the remaining forest in the clear-cut area could contribute to prevent continuous disturbance in forest interior.

• KSCE Journal of Civil and Environmental Engineering Research
• /
• v.28 no.1B
• /
• pp.161-168
• /
• 2008

The ecological environmental zones in coastal area, like tidal flat and salt marsh, were gradually decreased due to large scale of coastal development projects, reclamation and so on. Therefore, the development of artificial tidal flat and salt marsh has been emphasized in coastal area as mitigation concept and studies on related this background has performed. But studies on the quantitative evaluation for degree of restoration were insufficient. In this paper, as a fundamental study for evaluation of restoration on the creation of ecological environmental zones in coastal area, it was conducted that the monitoring and experiment for bio-chemical factors (bio-diversity, population and biomass of macro-benthos, survival ratio of reed, the number of heterotrophic bacteria and physico-chemical characteristics such as COD, IL, TN, TP and pH) using a in-situ pilot plant of tidal flat (Zone. P1) and salt marsh (Zone. P2), which was distinguished by content of dredged soil, in Jinudo, Nakdong estuary. From results of this study, the restoration index (RI), for evaluation concerning degree of restoration on the creation of ecological environmental zones in coastal area, was suggested and quantitative evaluation was performed using a restoration index (RI).

• Asian-Australasian Journal of Animal Sciences
• /
• v.21 no.7
• /
• pp.947-953
• /
• 2008

We studied genetic diversity and relationships among Mongolian goat populations on the basis of microsatellite DNA polymorphisms. DNA samples from eight populations (Bayandelger, Ulgii Red, Zavkhan Buural, Sumber, Zalaajinst White, Erchim Black, Dorgon, and Gobi Gurvan Saikhan) from geographically distinct areas of Mongolia were analyzed by using 10 microsatellite DNA markers. Since the 10 markers were highly polymorphic, the genetic characteristics of these native goat populations could be estimated. Genetic diversity within populations, as estimated by the expected heterozygosities, was high, ranging from 0.719 to 0.746, but genetic differentiation between populations was low, representing only 1.7% of the total genetic variation. The results suggest that Mongolian native goat populations still have a semi-wild genetic structure reflecting traditional Mongolian nomadism and the short history of artificial selection. The genetic relationships among the populations were not clear in the neighbor-joining tree generated from the modified Cavalli-Sforza chord genetic distances. By using principal components analysis, the five core populations of Mongolian native goats (Bayandelger, Ulgii Red, Zavkhan Buural, Sumber, and Dorgon) and the populations crossed with Russian breeds (Zalaajinst White, Erchim Black, and Gobi Gurvan Saikhan) were distinguished. There was no correlation between genetic relationships among the populations and the geographical distribution of the populations.

• Korean Journal of Environment and Ecology
• /
• v.22 no.4
• /
• pp.347-355
• /
• 2008

This study analyzed and modeled the relationships between the species richness of fish, plant, and bird and environmental factors such as climatic and geographical variables based on data collected from 109 major drainage systems in Japan from 1990 until 2005. As a result, the most parts of the distributions of the fish, plant, and bird species richness were clarified by the average annual atmospheric temperature, dimension of drainage areas, and annual rainfall, respectively. In addition, this study predicted the value of each organism species distributed in national drainage areas in Japan using GAMs(Generalized Additive Models) for each organism model created by environmental factors on a wide-ranging scale, and also mapped out the value. Mapping out the predicted value could make it easier for its managers to newly set up the areas needing to be protected to obtain diversity of the organism species and to assess their availability of conservation for bio-diversity.

• Journal of Korea Water Resources Association
• /
• v.42 no.6
• /
• pp.481-491
• /
• 2009

In this study, a comprehensive field monitoring was conducted to understand habitat conditions of fish species in the upper Geum river. Based on the monitoring data, riverine health conditions such as composition ratio of fish species, richness and dominance indexes, bio-diversity (dominance index, diversity, evenness and richness), and index of biological integrity were assessed, and optimal ecological flowrates were estimated using the habitat suitability indexes established for three fish species Coreoleuciscus splendidus, Zacco platypus and Pseudopungtungia nigra selected as icon species using the physical habitat simulation system (PHABSIM). The total number of species sampled was 20 species, and two sensitive species of C. splendidus (22.4%) and Z. platypus (22.0%) dominated the fish community. The estimated IBI values ranged from 34 to 42 with average being 38 out of 50, rendering the site ecologically fair to good health conditions. An optimal ecological flowrate of 9.0 cms was recommended for the representative fish species at the site.

• Korean Journal of Environment and Ecology
• /
• v.23 no.2
• /
• pp.135-142
• /
• 2009

To investigate the vegetation structure of mountain ridges ranging from Sebong to Gwaneumbong 23 plots($400m^2$) set up with random sampling method were surveyed. Two groups of Pinus densiflora community, Pinus densiflora-Quercus variabilis-Quercus serrata community were classified by cluster analysis. Pinus densiflora, Quercus variabilis, Quercus serrata, Carpinus laxiflora, and Quecus mongolica were found as a mostly dominant woody plant species in the ridge area from Sebong to Gwaneumbong. In the future, the importance percentage of Pinus densiflora might be decreased, but those of Quercus variabilis, Quercus serrata, Carpinus laxiflora, and Quecus mongolica might be increased. High positive correlations were proved between Quercus variabilis and Fraxinus sieboldiana, Acer palmatum and Ilex macropoda, Cornus kousa and Platycarya strobilacea, Sorbus alnifolia and Carpinus laxiflora, and relatively weak negative correlations were proved between Pinus densiflora and Carpinus laxiflora, Fraxinus sieboldiana and Carpinus laxiflor, Quecus mongolica and Sorbus alnifolia, Ilex macropoda and Sorbus alnifolia. Species diversity index(H') of investigated groups was ranged $0.665{\sim}1.169$.

• Proceedings of the Korean Society of Crop Science Conference
• /
• 2017.06a
• /
• pp.83-83
• /
• 2017

The National Agrobiodiversity Center (NAS, RDA, Republic of Korea) has continually collected new valuable genetic resources. In this study, we regenerated conserved kidney bean (Phaseolus vulgaris L.) germplasm which couldn't be available because of seed quantity and quality, and we also surveyed their morphological characters for the sustainable utilization. A total of 431 kidney bean accessions were regenerated and 18 morphological traits were surveyed according to the characterization guideline of RDA Genebank. Among the surveyed traits, flowering time ranged from May 23 to September 4 and 73.8% of tested accessions were mainly flowering in June. The maturity time ranged from July 1 to October 15 and main flowering time was July (91.4%). For plant type, 270 accs (62.6%) were climbing type followed by medium type of 86 accs (20.0%) and dwarf type of 65 accs (15.1%). The seed coat colors were various; yellow (34.6%), white (22.3%), brown (17.9%), red (10.7%), black (5.8%), violet (11%), pink (1.4%), navy (0.9%). Principal component analysis indicated that five principal components (PCs) with Eigen values >1 accounted for more than 65.8% variability. The first PC was more related to growth habits such as growth type, flowering time, and plant type. The second and third PCs showed higher values of the pigment characters such as seed coat color, flower color, and pod color. In fourth and fifty PCs, there were the higher positive values of the pod shapes. Our results provided insight into the characteristics kidney beans, thus the utilization basis of kidney beans might be elevated for bio-industry.

• Asian-Australasian Journal of Animal Sciences
• /
• v.31 no.9
• /
• pp.1393-1400
• /
• 2018

Objective: This study was carried out to assess the haplotype diversity and population dynamics in cattle populations of Ethiopia. Methods: We sequenced the complete mitochondrial cytochrome b gene of 76 animals from five indigenous and one Holstein Friesian${\times}$Barka cross bred cattle populations. Results: In the sequence analysis, 18 haplotypes were generated from 18 segregating sites and the average haplotype and nucleotide diversities were $0.7540{\pm}0.043$ and $0.0010{\pm}0.000$, respectively. The population differentiation analysis shows a weak population structure (4.55%) among the populations studied. Majority of the variation (95.45%) is observed by within populations. The overall average pair-wise distance ($F_{ST}$) was 0.049539 with the highest ($F_{ST}=0.1245$) and the lowest ($F_{ST}=0.011$) $F_{ST}$ distances observed between Boran and Abigar, and Sheko and Abigar from the indigenous cattle, respectively. The phylogenetic network analysis revealed that all the haplotypes detected clustered together with the Bos taurus cattle and converged to a haplogroup. No haplotype in Ethiopian cattle was observed clustered with the reference Bos indicus group. The mismatch distribution analysis indicates a single population expansion event among the cattle populations. Conclusion: Overall, high haplotype variability was observed among Ethiopian cattle populations and they share a common ancestor with Bos taurus.

• Journal of Microbiology and Biotechnology
• /
• v.18 no.12
• /
• pp.1874-1883
• /
• 2008

Bacterial diversity and the composition of individual communities during the composting process of swine and mushroom cultural wastes in a field-scale composter (Hazaka system) were examined using a PCR-based approach. The composting process was divided into six stages based on recorded temperature changes. Phylogenetic analysis of eighty 16S rRNA sequences from uncultured composting bacterial groups revealed the presence of representatives from three divisions, including plant pathogenic bacteria, high-molecule-degrading bacteria and spore-forming bacteria. The plant pathogen A. tumefaciens gradually decreased in abundance during the composting process and eventually disappeared during the thermophilic and cooling stage. A bacterium homologous to Bacillus humi first appeared at the early thermophilic stage and was established at the intermediate thermophilic, post-thermophilic, and cooling stages. It was not possible to isolate the B. humi during any of the stages using general culture techniques.