• Title/Summary/Keyword: Base pair

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Research on Digital Complex-Correlator of Synthetic Aperture Radiometer: theory and simulation result

  • Jingye, Yan;Ji, Wu;Yunhua, Zhang;Jiang, Changhong;Tao, Wang;Jianhua, Ren;Jingshan, Jiang
    • Proceedings of the KSRS Conference
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    • 2002.10a
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    • pp.587-592
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    • 2002
  • A new digital correlator fur an airborne synthetic aperture radiometer was designed in order to replace the conventional analog correlator unit which will become very complicated while the number of channels is increasing. The digital correlator uses digital IQ demodulator instead of the intermediate frequency (IF) phase shifter to make the correlation processing performed digitally at base band instead of analogly at IF. This technique has been applied to the digital receiver in softradio. The down-converted IF signals from each pair of receiver channels become low rate base-band digital signals after under-sampled, Digitally Down-Converted (DDC), decimated and filtered by FIR filters. The digital signals are further processed by two digital multipliers (complex correlation), the products are integrated by the integrators and finally the outputs from the integrators compose of the real part and the imaginary part of a sample of the visibility function. This design is tested by comparing the results from digital correlators and that from analog correlators. They are agreed with each other very well. Due to the fact that the digital correlators are realized with the help of Analog-Digital Converter (ADC) chips and the FPGA technology, the realized volume, mass, power consumption and complexity turned out to be greatly reduced compared with that of the analog correlators. Simulations show that the resolution of ADC has an influence on the synthesized antenna patterns, but this can be neglected if more than 2bit is used.

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Identification and Expression of Retroviral Envelope Polyprotein in the Dogfish Squalus mitsukurii

  • Kim, Soo Cheol;Sumi, Kanij Rukshana;Choe, Myeong Rak;Kho, Kang Hee
    • Journal of Marine Life Science
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    • v.1 no.2
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    • pp.88-94
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    • 2016
  • Determining the infection history of living organisms is essential for understanding the evolution of infection agents with their host, particularly for key aspects such as immunity. Viruses, which can spread between individuals and often cause disease, have been widely examined. The increasing availability of fish genome sequences has provided specific insights into the diversity and host distribution of retroviruses in fish. The shortspine spurdog (Squalus mitsukurii) is an important elasmobranch species; this medium-sized dogfish typically lives at depths of 100~500 m. However, the retroviral envelope polyprotein in dogfish has not been examined. Thus, the aim of the present study was to identify and analyze the retroviral envelope polyprotein in various tissues of dogfish. The 1334-base pair full-length novel cDNA of dogfish envelope polyprotein (dEnv) was obtained by 3' and 5'-rapid amplification of cDNA end analysis from S. mitsukurii. The open reading frame showed a complete coding sequence of 815 base pairs with a deduced peptide sequence of 183 amino acids that exhibited 34~50% identity with other fish and bird species. It was also expressed according to reverse transcription and real-time polymerase chain reaction in the kidney, liver, intestine, and lung, but not in the gill. This distribution can be assessed by identifying and analyzing endogenous retroviruses in fish, which consists of three main genes: gag, pol and env. Dogfish envelope polyprotein sequence is likely important in evolution and induces rearrangements, altering the regulatory and coding sequences. This is the first report of the identification and molecular characterization of retroviral envelope polyprotein in various tissues of S. mitsukurii.

General Relation Extraction Using Probabilistic Crossover (확률적 교차 연산을 이용한 보편적 관계 추출)

  • Je-Seung Lee;Jae-Hoon Kim
    • KIPS Transactions on Software and Data Engineering
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    • v.12 no.8
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    • pp.371-380
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    • 2023
  • Relation extraction is to extract relationships between named entities from text. Traditionally, relation extraction methods only extract relations between predetermined subject and object entities. However, in end-to-end relation extraction, all possible relations must be extracted by considering the positions of the subject and object for each pair of entities, and so this method uses time and resources inefficiently. To alleviate this problem, this paper proposes a method that sets directions based on the positions of the subject and object, and extracts relations according to the directions. The proposed method utilizes existing relation extraction data to generate direction labels indicating the direction in which the subject points to the object in the sentence, adds entity position tokens and entity type to sentences to predict the directions using a pre-trained language model (KLUE-RoBERTa-base, RoBERTa-base), and generates representations of subject and object entities through probabilistic crossover operation. Then, we make use of these representations to extract relations. Experimental results show that the proposed model performs about 3 ~ 4%p better than a method for predicting integrated labels. In addition, when learning Korean and English data using the proposed model, the performance was 1.7%p higher in English than in Korean due to the number of data and language disorder and the values of the parameters that produce the best performance were different. By excluding the number of directional cases, the proposed model can reduce the waste of resources in end-to-end relation extraction.

Breeding status and nest site characteristics of Black-faced Spoonbills Platalea minor on Chilsando Islands, Korea (칠산도의 저어새 번식 현황과 둥지장소 특성)

  • Kwon, In-Ki;Kang, Jung-Hoon;Lee, Ki-Sup;Lee, Ji-Yeon;Kim, In-Kyu;Yoo, Jeong-Chil
    • Korean Journal of Environment and Ecology
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    • v.29 no.5
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    • pp.703-709
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    • 2015
  • A breeding pair of the Black-faced Spoonbill Platalea minor was firstly recorded on Chilsando Islands, Younggwang, Jeollanamdo Province in 1991. Since the mid 2000s, breeding population on the breeding sites has gradually increased. This study was conducted to identify breeding status and nest site characteristics of the species from May to August, 2013 on Chilsando Islands. We recorded number of nests, length and width of the nest base, slope around the nests, nest materials, distances from the nearest nest, presence of nest cover and nesting area. In 2013 breeding season, 25 of 49 nests produced at least one successful fledging. A total of 55 youngs were successfully fledged and number of fledging per nest was 2.20 individuals. Nesting area was $77.8m^2$ and $93.4m^2$ for Sansando and Yuksando Islet, respectively. Soil and soil mixed with tree root were preferred for substrate of nest base over rock and Brassica napus was dominantly selected as nest materials by Black-faced Spoonbills. Nest characteristics of 22 nests in Sasando and Yuksando Islet varied $49.59{\pm}6.53cm$(mean${\pm}$SD) for length of nest base, $41.00{\pm}5.82cm$ for width of nest base, $20.85{\pm}9.96^{\circ}$ for slope above the nest, $34.09{\pm}17.75^{\circ}$ for slope below the nest and $130.82{\pm}84.17cm$ for distances from the nearest nest. Fifteen pairs (68.2%) occupied where nest cover existed. Nest cover were located in front of the nest for 5 pairs, back of the nest for 9 pairs and both front and back of the nest for 1 pair.

Efficient Implementation of Candidate Region Extractor for Pedestrian Detection System with Stereo Camera based on GP-GPU (스테레오 영상 보행자 인식 시스템의 후보 영역 검출을 위한 GP-GPU 기반의 효율적 구현)

  • Jeong, Geun-Yong;Jeong, Jun-Hee;Lee, Hee-Chul;Jeon, Gwang-Gil;Cho, Joong-Hwee
    • IEMEK Journal of Embedded Systems and Applications
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    • v.8 no.2
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    • pp.121-128
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    • 2013
  • There have been various research efforts for pedestrian recognition in embedded imaging systems. However, many suffer from their heavy computational complexities. SVM classification method has been widely used for pedestrian recognition. The reduction of candidate region is crucial for low-complexity scheme. In this paper, We propose a real time HOG based pedestrian detection system on GPU which images are captured by a pair of cameras. To speed up humans on road detection, the proposed method reduces a number of detection windows with disparity-search and near-search algorithm and uses the GPU and the NVIDIA CUDA framework. This method can be achieved speedups of 20% or more compared to the recent GPU implementations. The effectiveness of our algorithm is demonstrated in terms of the processing time and the detection performance.

Capacity Enhancement of Uni-directional In-band Full-Duplex Cellular Networks through Co-channel Interference Cancellation

  • Ju, Hyungsik;Gwak, Donghyuk;Kim, Sun-Ae;Lee, Yuro;Kim, Tae-Joong
    • ETRI Journal
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    • v.40 no.2
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    • pp.207-217
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    • 2018
  • As implementation of the in-band full duplex (IFD) transceiver becomes feasible, research interest is growing with respect to using IFD communication with cellular networks. However, the cellular network in which the IFD communication is applied inevitably suffers from an increase of the co-channel interference (CCI) due to IFD simultaneous transmission and reception. In this paper, we analyze the performance of a cellular network based on uni-directional IFD (UD-IFD) communication, wherein an IFD base station simultaneously supports downlink and uplink transmissions of half-duplex (HD) users. In addition, a multi-pair CCI cancellation (MP-CCIC) method combining CCIC and user pairing is proposed to improve the performance of the UD-IFD network. Simulation results showed that, compared to a conventional HD cellular network without using CCIC, capacity gain was not obtained in the UD-IFD cellular network. On the other hand, when applying the proposed MP-CCIC, the capacity of the UD-IFD cellular network greatly improved compared to that of an HD cellular network.

Optimal Design of a New Rolling Mill Based upon Stewart Platform Manipulator : Maximization of Kinematic Manipulability (병렬구조 신 압연기의 최적설계 : 조작성 및 제어성능의 최대화)

  • Hong, Geum-Sik;Lee, Seung-Hwan;Choe, Jin-Tae
    • Journal of Institute of Control, Robotics and Systems
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    • v.8 no.9
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    • pp.764-775
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    • 2002
  • A kinematic and dynamic optimal design of a new parallel-type rolling mill based upon Stewart platform manipulator is investigated. To provide sufficient degrees-of-freedom in the rolling process and the structural stability of each stand, a parallel manipulator with six legs is considered. The objective of this new parallel-type rolling mill is to permit an integrated control of the strip thickness, strip shape, pair crossing angle, uniform wear of the rolls, and tension of the strip. By splitting the weighted Jacobian matrices Into two parts, the linear velocity, angular velocity, force, and moment transmissivities are analyzed. A manipulability measure, the ratio of the manipulability ellipsoid volume and the condition number of a split Jacobian matrix, is defined. Two kinematic parameters, the radius of the base and the angle between two neighboring Joints, are optimally designed by maximizing the global manipulability measure in the entire workspace. The maximum force needed in the hydraulic actuator is also calculated using the structure determined through the kinematic analysis and the Plucker coordinates. Simulation results are provided.

Characterization of beer-spoilage microorganism and its rapid detection by specific PCR primer (맥주오염미생물의 동정과 specific PCR primer의한 신속한 검출 방법)

  • Lee, Taek-In;Choi, Shin-Geon
    • Journal of Industrial Technology
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    • v.28 no.A
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    • pp.141-147
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    • 2008
  • Several contaminated bacteria such as Lactobacillus brevis and Pediococcus damnosus in beer production cause beer spoilage by producing off flavours and turbidity. Detection of these organisms is complicated by the strict anaerobic conditions and lengthy incubation times required for their cultivation, consequently there is a need for more rapid detection methods. Recently, two contaminated strains were isolated from vessel of beer production and identified as Lactobacillus species by API kit identificaton as well as 16S-23S ITS sequencing analyses. Two isolated strains were named as Lactobacillus sp. HLA1 and Lactobacillus HLB2, respectively. A polymerase chain reaction (PCR) method was developed for the rapid and specific detection of Lactobacillus sp.. Two sets of primer pairs (HLA1-F/HLA1-R and HLB2-F/HLB2-R) were designed for the amplification of a 1576 base pair (bp) fragment of the HLA1 16S-23S rRNA gene and 1888 bp fragement of the HLB2 16S-23S rRNA. Amplified PCR products were highly specific to detect corresponding bacteria when other contaminated strains were used as PCR templates. However, detection of both strains were limited when $100{\mu}{\ell}$ of cultured samples were mixed with $100m{\ell}$ of beer sample in arbitrary manner. The sensitivity of the assay still needs to be improved for direct detection of the small amounts of bacteria present in beer.

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Design and Implementation of Flooding based Energy-Efficiency Routing Protocol for Wireless Sensor Network (무선 센서네트워크에서 에너지 효율을 고려한 단층기반 라우팅 프로토콜의 설계와 구현)

  • Lee, Myung-Sub;Park, Chang-Hyeon
    • The KIPS Transactions:PartC
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    • v.17C no.4
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    • pp.371-378
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    • 2010
  • In this paper, we propose a new energy-efficient routing algorithm for sensor networks that selects a least energy consuming path among the paths formed by node with highest remaining energy and provides long network lifetime and uniform energy consumption by nodes. The pair distribution of the energy consumption over all the possible routes to the base station is one of the design objectives. Also, an alternate route search mechanism is proposed to cope with the situation in which no routing information is available due to lack of remaining energy of the neighboring nodes. Simulation results show that our algorithm extends the network lifetime and enhances the network reliability by maintaining relatively uniform remaining energy distribution among sensor nodes.

Bacillus stearothermophilus Acetylxylan Esterase 유전자(estI)의 염기 서열 결정

  • 이정숙;최용진
    • Microbiology and Biotechnology Letters
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    • v.25 no.1
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    • pp.23-29
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    • 1997
  • The nucleotide sequence of the estI gene encoding acetylxylan esterase I of Bacillus stearothermophilus was determined and analyzed. The estI gene was found to consist of a 810 base pair open reading frame coding for a polypeptide of 270 amino acids with a deduced molecular weight of 30 kDa. This was in well agreement with the molecular weight (29 kDa) estimated by SDS-PAGE of the purified esterase. The coding sequence was preceded by a putative ribo some binding site 10 bp upsteam of the ATG codon. Further 53 bp upstream, the transcription initiation signals were identified. The putative $_{-}$10 sequence (TCCAAT) and $_{-}$35 seqence (TTGAAT) corresponded closely to the respective consensus sequences for the Bacillus subtiis major RNA polymerase. The G+C content of the coding region of the estI was 51% whereas that of the third position of codone was 60.2%. The N-terminal amino acid sequence of the EstI deduced from the nucleotide sequence perfectly matched the corresponding region of the purified esterase described previously. Comparison with the amino acid sequence of other esterases and lipases reported so far allowed us to identify a sequence, GLSMG at positions 123 to 127 of the EstI which was reported to be the highly conserved active site sequence for those enzymes. The nucleotide sequence of the estI revealed 55.7% homology to that of the xylC coding for the acetylxylan esterase of Caldocellum saccharolyticum.

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