• 제목/요약/키워드: Banding-methods

검색결과 40건 처리시간 0.026초

Frequency of Chromosomal Abnormalities in Pakistani Adults with Acute Lymphoblastic Leukemia

  • Shaikh, Muhammad Shariq;Adil, Salman Naseem;Shaikh, Mohammad Usman;Khurshid, Mohammad
    • Asian Pacific Journal of Cancer Prevention
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    • 제15권21호
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    • pp.9495-9498
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    • 2014
  • Background: The difference in prognosis of adult and childhood acute lymphoblastic leukemia (ALL) can be attributed largely to variation in cytogenetic abnormalities with age groups. Cytogenetic analysis in acute leukemia is now routinely used to assist patient management, particularly in terms of diagnosis, disease monitoring, prognosis and risk stratification. Knowing about cytogenetic profile at the time of diagnosis is important in order to take critical decisions in management of the patients. Aim and Objectives: To determine the frequency of cytogenetic abnormalities in Pakistani adult patients with ALL in order to have insights regarding behavior of the disease. Materials and Methods: A retrospective analysis of all the cases of ALL (${\geq}15$years old) diagnosed at Aga Khan University from January 2006 to June 2014 was performed. Phenotype (B/T lineage) was confirmed in all cases by flow cytometry. Cytogenetic analysis was made for all cases using the trypsin-Giemsa banding technique. Karyotypes were interpreted using the International System for Human Cytogenetic Nomenclature (ISCN) criteria. Results: A total of 166 patients were diagnosed as ALL during the study period, of which 151 samples successfully yielded metaphase chromosomes. The male to female ratio was 3.4:1. The majority (n=120, 72.3%) had a B-cell phenotype. A normal karyotype was present in 51% (n=77) of the cases whereas 49% (n=74) had an abnormal karyotype. Of the abnormal cases, 10% showed Philadelphia chromosome; t(9;22)(q34;q11.2). Other poor prognostic cytogenetic subgroups were t(4;11)(q21;q23), hypodiploidy (35-45 chromosomes) and complex karyotype. Hyperdiploidy (47-57 chromosomes) occurred in 6.6%; all of whom were younger than 30 years. Conclusions: This study showed a relatively low prevalence of Philadelphia chromosome in Pakistani adults with ALL with an increase in frequency with age (p=0.003). The cumulative prevalence of Philadelphianegative poor cytogenetic aberrations in different age groups was not significant (p=0.6).

The biomechanical and biological effect of supercooling on cortical bone allograft

  • MuYoung Kim ;Hun-Young Yoon
    • Journal of Veterinary Science
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    • 제24권6호
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    • pp.79.1-79.16
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    • 2023
  • Background: The need for a storage method capable of preserving the intrinsic properties of bones without using toxic substances has always been raised. Supercooling is a relatively recently introduced preservation method that meets this need. Supercooling refers to the phenomenon of liquid in which the temperature drops below its freezing point without solidifying or crystallizing. Objectives: The purpose of this study was to identify the preservation efficiency and applicability of the supercooling technique as a cortical bone allograft storage modality. Methods: The biomechanical effects of various storage methods, including deep freezing, cryopreservation, lyophilization, glycerol preservation, and supercooling, were evaluated with the three-point banding test, axial compression test, and electron microscopy. Additionally, cortical bone allografts were applied to the radial bone defect in New Zealand White rabbits to determine the biological effects. The degree of bone union was assessed with postoperative clinical signs, radiography, micro-computed tomography, and biomechanical analysis. Results: The biomechanical properties of cortical bone grafts preserved using glycerol and supercooling method were found to be comparable to those of normal bone while also significantly stronger than deep-frozen, cryopreserved, and lyophilized bone grafts. Preclinical research performed in rabbit radial defect models revealed that supercooled and glycerol-preserved bone allografts exhibited significantly better bone union than other groups. Conclusions: Considering the biomechanical and biological superiority, the supercooling technique could be one of the optimal preservation methods for cortical bone allografts. This study will form the basis for a novel application of supercooling as a bone material preservation technique.

사람의 정확한 염색체 분석을 위한 고해상 G-분염 염색체와 R-분염 염색체 (High Resolution G- and R-banding for Accurate analysis in Human Chromosomes)

  • 박소연;최수경;이형환
    • Clinical and Experimental Reproductive Medicine
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    • 제22권2호
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    • pp.109-122
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    • 1995
  • A technique is described for producing high resolution G- and R-banded chromosomes in human peripheral lymphocyte cultures. Cultured lymphocyte cells were exposed to ethidium bromide ($10{\mu}g/ml$) and colcemid ($0.02{\mu}g/ml$) each for 2.5h and 0.5h prior to harvest for high resolution G-banded chromosomes. High resolution R-band patterns were obtained by BrdU substitution which was revealed by the fluorochrome-photolysis-Giemsa staining technique. These methods are easy to perform and highly reliable. The data on relative length of chromosomes at the four mitotic stages are presented in units of percentage of haploid autosome length. The characteristic patterns of GTG-bands (G-bands after trypsin and Giemsa) and RBG bands (R-bands after BrdU and Giemsa) were analyzed.

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딸기바이러스 진단을 위한 최적의 RNA 추출 방법 및 주요 7종 딸기바이 러스의 진단법 개발 (Optimal RNA Extraction Methods and Development of Synthetic Clones for Seven Strawberry Viruses)

  • 권선정;윤주연;조인숙;정봉남
    • 식물병연구
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    • 제26권3호
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    • pp.170-178
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    • 2020
  • 바이러스의 정확한 진단법 확립은 바이러스의 피해 및 확산을 예방하는데 매우 중요하게 작용한다. 대부분의 딸기 바이러스는 조직내에 낮은 역가로 분포하여 진단이 어렵고, 특히 딸기 조직은 다당류 및 페놀화합물의 함유가 많아 RNA 추출이 어려운 것으로 알려져 있다. 딸기 우량묘 생산에 필요한 바이러스 검정기술을 확립하기 위해 본 연구에서는 딸기 잎에서 바이러스 진단을 위해 가장 최적의 RNA 추출방법 정립을 위해 다양한 상용 키트와 시약을 이용하여 RNA 추출효율 비교하였다. 바이러스 진단을 통한 RNA 추출효율을 분석하기 위해 SMoV 감염주인 미홍 딸기 품종을 이용하여 다양한 단계에서 잎조직으로부터 RNA를 추출하고 바이러스 진단을 수행하였다. 식물 RNA 추출 방법 가운데 상업용으로 판매되는 RNeasy plant mini kit (Qiagen)를 이용하는 경우 본 연구에서 살펴본 one-step 또는 two-step RT-PCR 방법과 무관하게 SMoV의 검출이 잘 되었다. 또한, 딸기 우량묘의 바이러스 검정에 대한 신뢰있는 진단방법을 구축하기 위해 주요 딸기 바이러스인 strawberry mild yellow edge virus (SMYEV), strawberry mottle virus (SMoV), strawberry latent ringspot virus (SLRSV), strawberry crinkle virus (SCV), strawberry pallidosis associated virus (SPaV), strawberry vein banding virus (SVBV) 및 strawberry necrotic shock virus (SNSV) 7종에 대한 유전자 합성을 통해 진단클론을 제작하였다. 각 클론의 합성유전자를 기반으로 7종의 딸기바이러스 프라이머 세트를 설계하고 편리한 진단법 수행을 위해 동일한 PCR 조건을 설정하였다.

한국산(韓國產) 차나무과(科) 6종(種)의 계통(系統) 분류학적(分類學的) 연구(硏究) (A Systematic Study of the Theaceae 6 Species in Korea)

  • 김삼식;이정환
    • 한국산림과학회지
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    • 제82권4호
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    • pp.431-440
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    • 1993
  • 한국산(韓國產) 차나무과(科) 6속(屬) 6종(種)을 형태학적(形態學的), 해부학적(解剖學的), Peroxidase 동위효소분석(同位酵素分析) 및 수리학적(數理學的) 분석(分析) 방법(方法)으로 유연관계(類緣關係)를 구명(究明)한 결과(結果)는 다음과 같다. 엽형질(葉形質)에 의한 아과분류(亞科分類)는 평균결합법(平均結合法)과 완전결합법(完全結合法)이 좋은 결과를 보였으며, 주성분(主成分) 분석(分析)에서 기여도(寄與度)가 높은 형질(形質)은 엽폭(葉幅), 엽장(葉長) 등(等)의 잎의 크기였다. 엽맥(葉脈)과 분지각(分枝角)의 크기에 따라 차나무 아과(亞科)는 차나무${\rightarrow}$동백나무${\rightarrow}$노각나무로, 후피향나무아과(亞科)는 사스레피나무${\rightarrow}$비쭈기나무${\rightarrow}$후피향나무로 분류(分類)되었다. 기공(氣孔)의 형태(形態)는 차나무아과(亞科)는 기공(氣孔)의 주위에 부세포(副細胞)가 있는 평행형(平行形)(paracytic type)이고, 후피향나무아과(亞科)는 부세포(副細胞)가 없는 불규칙형(不規則形)(anomocytic type)으로 분류(分類)되었다. Peroxidase 동위효소분석에서 과(科)의 공유(共有)band는 없으나 차나무아과(亞科)는 No.5(Rf. 4.0-4.4)에서, 후피향나무아과(亞科)는 No.7(Rf. 5.7-6.2)에서 아과(亞科)를 구분(區分)할 수 있는 banding pattern이 있었다. 엽형질과 Peroxidase 동위효소분석(同位酵素分析)에 의한 류집분석(類集分析) 결과 유사한 분류군(分類群)을 형성하여 좋은 분류형질로 작용하였다.

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가로수 식재체계 수립 (Establishment of Roadside Tree Planting System in Kangnung)

  • 박용진;김태경
    • 한국조경학회지
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    • 제28권5호
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    • pp.93-103
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    • 2000
  • This research is to propose a rational criterion of the selection and the management f the roadside trees, and to establish the planting design and system with the objective of improving the roadside environment. All of the roadside trees in each objective courses in Kangnung, and the soil disposition, hardness of the soil in the planting areas have been investigated. Also, we have surveyed the kinds of the trees which kandgnung inhabitants want. The conclusion is as follows Most of roadsides have trees, but they need the introduction of shrubs or ground covering plants according to the locations and the environmental conditions. We have selected nineteen species in regard to the roadside tree criterion and the growing conditions living in Kangnung. It is desirable that we make banding style planting space between each roadside tree to improve the low ratio of green coverage. We have found out that Ligustrum obtusifolium, Buxus micropnylla, Euonymus japonica, Rhododendron schlippenbachii, Phyllostachys nigro and Rosa rugosa, ect. are suitable. In order to soften and weaken the rigidity of the hard substances on a paved roadside, the climbers such as the perennial herbaceous flowering and hedera rhombea should be preferred rather than annual herbaceous flowering because of curtailment of expenditure. To posses a systematical greenery frame in kangnung, we have planned a planting design system that would expand the greenery space every year. Moreover, we have to make a plan to overcome space restrictions. We have established a flexible plan considering the roadside conditions and the improved standard planting methods with an ultimate aim to create a special roadside view.

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Paracentric Inversions Found in Prenatal Diagnosis

  • Lee, Shin Yeong;Lee, Bom Yi;Park, Ju Yeon;Choi, Eun Young;Lee, Yeon Woo;Oh, Ah Rum;Ryu, Hyun Mee;Park, So Yeon
    • Journal of Genetic Medicine
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    • 제10권2호
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    • pp.104-108
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    • 2013
  • Purpose: This study was designed to confirm whether the paracentric inversions of fetuses and parents may be harmless. Materials and methods: We report 10 cases (0.14%) with paracentric inversions among 7,181 prenatal cases observed during prenatal diagnosis performed at Cheil General Hospital between January 2009 and June 2013. We used cytogenetic GTL- and RBG-banding techniques. Results: Of the 10 cases, nine cases were transmitted from each of the parents, and one case was de novo. Nine cases were phenotypically normal up to one month of age after birth. One case was lost to follow-up. We present prenatal diagnosis and follow-up examination of the fetuses with paracentric inversion. Conclusion: Based on our cases, most paracentric inversions are considered to be harmless. The precise identification of paracentric inversions might be clinically important and helpful for genetic counseling.

중재합의의 효력범위에 관한 고찰 - 대법원 2011.12.22. 선고 2010다76573 판결을 중심으로 - (A Study on the Scope of Effect in Arbitration Agreements)

  • 김용길
    • 한국중재학회지:중재연구
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    • 제23권2호
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    • pp.1-35
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    • 2013
  • In the 21th century, its important role in international commercial disputes has established arbitration as the preferred form of dispute resolution. Because commercial disputes have become more complicated and varied with their quantitative increase, it is important that they be settled in a reasonable and rapid manner. Alternative Dispute Resolution (ADR) is now regarded as one of the most effective dispute resolution methods for the settling of commercial disputes and merits notice. Arbitration is a form of dispute resolution in which two parties agree to have their dispute resolved by one or more arbitrators and thereby avoid what could be costly and time-consuming court battles. Often contracts mandate that disputes be settled through arbitration. These arbitration clauses also frequently prohibit plaintiffs from banding together to bring an action on behalf of a larger class. An arbitration agreement is an agreement by parties to summit to arbitration all or certain disputes which have arisen or which may arise between them with respect to their defined legal relationship, whether contractual or not. According to the Supreme Court, general elective arbitration clauses may be considered valid in light of all the relevant facts. Arbitration has been the subject of a great deal of research and the scope of effect in arbitration agreements is a promising avenue for future research.

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Soil Microbial Community Assessment for the Rhizosphere Soil of Herbicide Resistant Genetically Modified Chinese Cabbage

  • Sohn, Soo-In;Oh, Young-Ju;Ahn, Byung-Ohg;Ryu, Tae-Hoon;Cho, Hyun-Suk;Park, Jong-Sug;Lee, Ki-Jong;Oh, Sung-Dug;Lee, Jang-Yong
    • 한국환경농학회지
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    • 제31권1호
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    • pp.52-59
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    • 2012
  • BACKGROUND: Cultivation of genetically modified(GM) crops rapidly has increased in the global agricultural area. Among those, herbicide resistant GM crops are reported to have occupied 89.3 million hectares in 2010. However, cultivation of GM crops in the field evoked the concern of the possibility of gene transfer from transgenic plant into soil microorganisms. In our present study, we have assessed the effects of herbicide-resistant GM Chinese cabbage on the surrounding soil microbial community. METHODS AND RESULTS: The effects of a herbicide-resistant genetically modified (GM) Chinese cabbage on the soil microbial community in its field of growth were assessed using a conventional culture technique and also culture-independent molecular methods. Three replicate field plots were planted with a single GM and four non-GM Chinese cabbages (these included a non-GM counterpart). The soils around these plants were compared using colony counting, denaturing gradient gel electrophoresis and a species diversity index assessment during the growing periods. The bacterial, fungal and actinomycetes population densities of the GM Chinese cabbage soils were found to be within the range of those of the non-GM Chinese cabbage soils. The DGGE banding patterns of the GM and non-GM soils were also similar, suggesting that the bacterial community structures were stable within a given month and were unaffected by the presence of a GM plant. The similarities of the bacterial species diversity indices were consistent with this finding. CONCLUSION: These results indicate that soil microbial communities are unaffected by the cultivation of herbicide-resistant GM Chinese cabbage within the experimental time frame.

유전자형에 따른 Streptococcus mutans의 subtyping: Southern blot RFLP와 AP-PCR을 이용한 비교 (EVALUATING TWO METHODS FOR FINGERPRINTING GENOMES FOR STREPTOCOCCUS MUTANS IN CHILDREN : A COMPARISON WITH AP-PCR AND SOUTHERN BLOT RFLP)

  • 정태성;김신
    • 대한소아치과학회지
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    • 제25권2호
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    • pp.292-303
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    • 1998
  • The arbitrary primer polymerase chain reaction(AP-PCR) and Southern blot restriction fragment length polymorphism(RFLP) were used to genotype the cariogenic pathogen S. mutans in children. Following the morphologic chracteristics of colony on selective medium for S. mutans, total genomic DNA from 155 strains was extracted by conventional methods. Among 155 strains, 143 strains (92.3%) were confirmed S. mutans by PCR with dexA gene and 114 strains were used in this study. Three random sequence 10-base oligonucleotide primers were chosen for AP-PCR. The amplified DNA products were separated electrophoretically in a 2% agarose gel containing ethidium bromide and the banding patterns were compared among different strains. For RFLP analysis, DNA was digested with EcoRI and BamHI, separated on a 0.7 % agarose gel and transferred to a nylon membrane. The membrane was probed with a previously characterised 1.6 kilobases (kb) DNA fragment cloned from gtf B gene of S. mutans. The probe was labeled with isotope[$^{32}P-{\alpha}CTP$], and hybridized fragments were detected with intensifying screen. AP-PCR produced 4-8 DNA bands in the 0.25-10 kb regions and distinguished 9, 10 or 12 genotypes, depending on the specific primer used. Southern blot RFLP analysis revealed 2 hybridization patterns consisting of 1 DNA fragments 450, 500 bp. These results indicate that AP-PCR is more discriminative method for genotyping of S. mutans.

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