• Title/Summary/Keyword: Awn

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Genetic Insights into Domestication Loci Associated with Awn Development in Rice

  • Ngoc Ha Luong;Sangshetty G. Balkunde;Kyu-Chan Shim;Cheryl Adeva;Hyun-Sook Lee;Hyun-Jung Kim;Sang-Nag Ahn
    • Proceedings of the Korean Society of Crop Science Conference
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    • 2022.10a
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    • pp.33-33
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    • 2022
  • Rice (Oryza sativa L.) is a widely studied domesticated model plant. Seed awning is an unfavorable trait during rice harvesting and processing. Hence, awn was one of the target characters selected during domestication. However, the genetic mechanisms underlying awn development in rice are not well understood. In this study, we analyzed the genes for awn development using a mapping population derived from a cross between the Korean indica cultivar 'Milyang23' and NIL4/9 (derived from a cross between 'Hwaseong' and O. minuta). Two quantitative trait loci (QTLs), qAwn4 and qAwn9 were mapped on chromosome 4 and 9, respectively, increased awn length in an additive manner. Through comparative sequencing analyses parental lines, LABA1 was determined as the causal gene underlying qAwn4. qAwn9 was mapped to a 199-kb physical region between markers RM24663 and RM24679. Within this interval, 27 annotated genes were identified, and five genes, including a basic leucine zipper transcription factor 76 (OsbZIP76), were considered candidate genes for qAwn9 based on their functional annotations and sequence variations. Haplotype analysis using the candidate genes revealed tropical japonica specific sequence variants in the qAwn9 region, which partly explains the non-detection of qAwn9 in previous studies that used progenies from interspecific crosses. This provides further evidence that OsbZIP76 is possibly a causal gene for qAwn9. The O. minuta qAwn9 allele was identified as a major QTL associated with awn development in rice, providing an important molecular target for basic genetic research and domestication studies. Our results lay the foundation for further cloning of the awn gene underlying qAwn9.

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Characteristics of Awns and Grains on Different Spikelet Positions in Barley (보리 이삭의 소수 위치에 따른 까락과 낟알의 특성)

  • 이강세;오양호
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.41 no.1
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    • pp.77-85
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    • 1996
  • To obtain basic information for characteristics of naked barley cultivars, awn length and weight, kernel weight along spikelet positions of some cultivars bred in Korea were investigated. Awn length and weight of third to fifth spikelet, and kernel weight of second to fourth spikelet from spike tip were not different from each mean value for total of spike. From the spike base, awn of third to fourth spikelet was longest and heaviest, and kernel weight of fifth to sixth spikelet was heaviest. Value for awn length, awn weight, and kernel weight of lateral row florets was lower 13 to 26%, 26 to 41%, and 18 to 25%, respectively than one for those of central row floret. Difference for awn length and weight between central and lateral row in nami type cultivars compared to uzu type cultivars was small. In the ratio of weight/length of awn, awn of uzu type cultivars was thicker than that of nami type cultivars, and awn of central row was thicker than those of lateral rows. Kernel weight was linearly related to awn weight. When one spike was divided into three parts, awn length and weight of low part were not different from those of central part, but were longer and heavier than those of upper part. The order of kernel weight was central$\geq$low>upper part.

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Diallel Cross Analysis of Characters in Barley (이면교잡에 의한 대맥형질의 유전분석)

  • Chung, Won-Bok;Chung, Dae-Soo;Takeda, Kazuyoshi;Sato, Kazuhiro
    • Journal of Life Science
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    • v.7 no.1
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    • pp.59-65
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    • 1997
  • In this experiment, gene actions were analysized for seven barley parents in order to obtain basic information on their genetic improvement by diallel crosses. The results obtained were summarized as follows. In analysis of variance, additive, dominant, maternal and reciprocal effects were observed significantly for culm length, tiller number, number of spiked per plant, culm diameter, awn length, leaf width, number of grains per spike, and 1000 grain weight. Over-dominance was shown by Vr-Wr graphic analysis in five characters such as tiller number, number of spikes per plant, length of flag leaf, number of grains per spike, and 1000 grain weight, and partial dominance in four characters such as culm length, culm diameter, awn length, and leaf width. Component of genetic varience analyzed for four characters such as culm diameter, awn length, length of flag leaf, and leaf width showed that additive effects were higher than dominant effects. Culm length, tiller number, number of spikes per plant, number of grains per spike, and 1000 grain weight showed dominant effects higher than additive effects. The narrow-sense heritability for awn length, leaf width, and number of grains per spike showed high values as more than 0.62, while broad-sense heritability for culm length, number of spikes per plant, culm diameter, awn length, leaf width, number of grains per spike, and 1000 grain weight showed high values as more than 0.65.

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Inheritance of Apiculus Color, Awn, and Long Empty Glume in Korean Rice Collection

  • Kang, Hee-Kyoung
    • Plant Resources
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    • v.6 no.2
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    • pp.98-101
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    • 2003
  • Colored apiculus, awn, and long empty glume are indicators of wildness and are usually eliminated during rice domestication. Genetic analysis was conducted to clarify the inheritance patterns of awn, apiculus color, and long empty glume in Korean rice collection. Based on individual characterization of F$_2$ progenies derived from crosses between parents with colorless and purple apiculus, two (3 colored: 1 colorless) or three dominant genes (9 purple: 3 red: 4 colorless) are estimated as controlling this character by simultaneous complementary action. Different inheritance systems were detected between S237 and S245 of 'Shareibyeo' which belong to the weedy type. To determine the genes responsible in awning and long empty glume characters, the inheritance of landrace varieties of rice ('Naengdo' and 'Yuna') was investigated. In the crosses of awned land race and awnless cultivar, three dominant genes are supposed to control the awning genetic system by 63 awned: 1 awnless individual. As for long empty glume, one recessive gene, g-l on the chromosome 4, was the one controlling the segregation ratio of 3 normal empty: 1 long empty glume. By analyzing the Korean rice collection, the inheritance systems of these wild characters may lead to a better understanding of rice domestication in the future.

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Taxonomy of Asian Geranium L.(Geraniaceae) based on fruit and seed morphology

  • Park, Seon-Joo;Park, Hong-Duok
    • Journal of Environmental Science International
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    • v.11 no.2
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    • pp.121-130
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    • 2002
  • Compare to investigate the taxonomic utility of infragenera system and interspecific of Asian Geranium, we examined the fruit and seed morphology from 35 taxa. The fruit shape and seed's dispersal way did so that may divide subgenus or some part section to do could reason evolutionary trends. That is, at seed dispersal, the awns of section Geranium of subgenus Geranium, ramains attached at the top of rostrum, though fairy easily broken off, because seed increases awn's elasticity by diffusive way, it is long characteristic seed\`s dispersal distance, and subgenus Robertium observed that seed dispersal distance is short because it is no awn's elasticity by way that seed dispersal is gone as awn drops with rostrum. Also, section Geranium of subgenus Geranium and subgenus Robertium act role that awn keeps temporarily breed swerving with mericarp instead of bristle because section Tuberosa of subgenus Geranium is not bristled function that keep temporarily breed because mericarp bristled on base at seed dispersal do while. Therefore, is thought that is talon that when consider formation's development and function regarding this seed dispersal function, subgenus Geraniuum evolves more than subgenus Robertium. Seed morphology can divide by 2 subgenera(Geranium, Robertium) according to pattern of seed coat. and Seed's morphology characteristic(whole shape, color, form of seed apical and base, micropyle area, hilum area, chalaza, and position of seed hilum area), can distinguish some species, but is thought that is not reasonable as for discernment characteristic form and nature by repetition of characteristic form and nature. Especially, infrasection do in fruit and seed's morphology that is handling in this research that know to argue classification system and relationship by repetition of characteristic form and nature difficult. To all reliable truth, cytological, ecological, embryology, and molecular genetics research about talon is considered that should be achieved section Geranium that do not handle yet.

Genetic Analyses on Quantitative Characters of F1 Generation in Malting Barley (맥주맥 F1세대의 양적형질에 대한 유전분석)

  • 정원복;오주성;황필성
    • Journal of Life Science
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    • v.13 no.1
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    • pp.29-33
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    • 2003
  • The study was conducted to get genetic information on quantitative characters of $F_1$ in barley through diallel crosses using seven malting barley. The results obtained were summarized as follows. Additive, dominant, maternal, and reciprocal effort were observed in culm length, spike length, awn length, culm diameter, grain length, grain width, ]lumber of grains per spike, and 1000 grain weight. Based on the Vr-Wr graphical analysis, culm length, spike length, awn length, grain length, and number of grains per spike were found to be inherited over dominance. Dominant effects were higher than additive effects in culm length, spike length, awn length, culm diameter, grain length, grain width, number of grains per spike, and 1000 grain weight. The narrow- sense heritability showed high value as 40.06% for spike length.

A RAM-based Cumulative Neural Net with Adaptive Weights (적응적 가중치를 이용한 RAM 기반 누적 신경망)

  • Lee, Dong-Hyung;Kim, Seong-Jin;Gwon, Young-Chul;Lee, Soo-Dong
    • Journal of Korea Multimedia Society
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    • v.13 no.2
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    • pp.216-224
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    • 2010
  • A RAM-based Neural Network(RNN) has the advantages of processing speed and hardware implementation. In spite of these advantages, it has a saturation problem, weakness of repeated learning and extract of a generalized pattern. To resolve these problems of RNN, the 3DNS model using cumulative multi discriminator was proposed. But that model does not solve the saturation problem yet. In this paper, we proposed a adaptive weight cumulative neural net(AWCNN) using the adaptive weight neuron (AWN) for solving the saturation problem. The proposed nets improved a recognition rate and the saturation problem of 3DNS. We experimented with the MNIST database of NIST without preprocessing. As a result of experimentations, the AWCNN was 1.5% higher than 3DNS in a recognition rate when all input patterns were used. The recognition rate using generalized patterns was similar to that using all input patterns.

Assessment of Antioxidative Capacity in Relation to Seed Trails of Rice Varieties

  • Song, Hong-Keun;Ahn, Joung-Kuk;Kim, Kwang-Ho;Lee, Sun-Joo;Baek, Jin-Yeong;Chung, Ill-Min
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.51 no.6
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    • pp.544-553
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    • 2006
  • In order to assess antioxidant capacity in relation to seed traits of rice (Oryza sativa L.), ninety-six varieties were examined for antioxidative activity of brown rice grain using superoxide dismutase (SOD), 1,1-diphenyl-2-picrylhydrazyl (DPPH), and thiobarbituric acid (TBA) assays. Overall, average total activities measured by the three methods were of very wide range between 64% and 13%. Significant differences were noted depending on the variety and evaluation method. Rice varieties with foreign origin, middle maturity, colored hulls, and colorless awn exhibited statistically significant higher total activity. As for the measurements, total activity was significantly correlated with SOD (r=0.29***), DPPH (r=0.80***) and TBA (r=0.76***). Between the three activities, SOD was not positively correlated with DPPH (r=0.15*), while TBA was significantly correlated with DPPH value (r=0.51***). DPPH (55.20%) and TBA (50.36%) were significantly higher in foreign rice, while SOD activity (44.29%) was significantly higher in domestic rice. However, an average total activity was significantly higher in foreign rice (47.31%) than in domestic rice (35.92%). SOD, DPPH and TBA activities of middle maturity in maturity time were the highest total activity (44.96%) and significantly differed from the other two groups. Total activity was significantly higher in rice with a colorless awn (42.18%) than with a colored awn (35.87%).

New Barley Cultivars with Improved Morphological Characteristics for Whole Crop Forage in Korea (한국에서 개발된 총체사료용 보리 품종의 형태적 특성)

  • Park, Tae-Il;Han, Ouk-Kyu;Seo, Jae-Hwan;Choi, Jae-Sung;Park, Ki-Hun;Kim, Jung-Gon
    • Journal of The Korean Society of Grassland and Forage Science
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    • v.28 no.3
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    • pp.193-202
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    • 2008
  • In Korea, domestic consumption of barley as a cereal crop has been decreasing since the 1980s. It has been considered that winter-season crop production could enhance the global competitiveness of domestic livestock industry by providing better quality fodder to livestock and enhancing field use rate. Therefore, the purpose of barley cultivation for cereal food production has been recently replaced by the production of forage barley. Consequently, the area of barley cultivation for forage is markedly increasing in Korea. Forage barley is cultivars especially as forage for cattle. While any type of barley can be used as forage for feeding cattle, forage barleys deliver a higher dry matter yield than conventional feed barley. We have developed forage barley cultivars with cattle's favorite characters such as smooth awn, hood and auricleless types. Cultivar Wooho, Yuyeon, and Dami have smooth awn, hood type spike, and auricleless type plant. We also developed rough awn type barley cultivars, such as Yongyang, Sunwoo, Sangweon, and Soman, showing earlymaturing and high-yielding. They showed about 12 to 10 ton ha-1 in dry matter yield (average 33 ton $ha^{-1}$ in fresh matter yield). And these were evaluated by forage quality which showed a higher grade of silage quality (TDN, ADF, NDF, CP, etc.) for whole crop barley use. Based on these results, it indicated that barley with smooth awn, hooded, and auricleless could be suitable sources in breeding for whole crop forage use.