• Title/Summary/Keyword: Animal monitoring

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Monitoring of genetically close Tsaiya duck populations using novel microsatellite markers with high polymorphism

  • Lai, Fang-Yu;Chang, Yi-Ying;Chen, Yi-Chen;Lin, En-Chung;Liu, Hsiu-Chou;Huang, Jeng-Fang;Ding, Shih-Torng;Wang, Pei-Hwa
    • Asian-Australasian Journal of Animal Sciences
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    • v.33 no.6
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    • pp.888-901
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    • 2020
  • Objective: A set of microsatellite markers with high polymorphism from Tsaiya duck were used for the genetic monitoring and genetic structure analysis of Brown and White Tsaiya duck populations in Taiwan. Methods: The synthetic short tandem repeated probes were used to isolate new microsatellite markers from the genomic DNA of Tsaiya ducks. Eight populations, a total of 566 samples, sourced from Ilan Branch, Livestock Research Institute were genotyped through novel and known markers. The population genetic variables were calculated using optional programs in order to describe and monitor the genetic variability and the genetic structures of these Tsaiya duck populations. Results: In total 24 primer pairs, including 17 novel microsatellite loci from this study and seven previously known loci, were constructed for the detection of genetic variations in duck populations. The average values for the allele number, the effective number of alleles, the observed heterozygosity, the expected heterozygosity, and the polymorphism information content were 11.29, 5.370, 0.591, 0.746, and 0.708, respectively. The results of analysis of molecular variance and principal component analysis indicated a contracting Brown Tsaiya duck cluster and a spreading White Tsaiya duck cluster. The Brown Tsaiya ducks and the White Tsaiya ducks with Pekin ducks were just split to six clusters and three clusters when K was set equal to 6 and 3 in the Bayesian cluster analysis. The individual phylogenetic tree revealed eight taxa, and each individual was assigned to its own population. Conclusion: According to our study, the 24 novel microsatellite markers exhibited a high capacity to analyze relationships of inter- and intra-population in those populations with a relatively limited degree of genetic diversity. We suggest that duck farms in Taiwan could use the new (novel) microsatellite set to monitor the genetic characteristics and structures of their Tsaiya duck populations at various intervals in order to ensure quality breeding and conservation strategies.

An Investigation of Emission of Particulate Matters and Ammonia in Comparison with Animal Activity in Swine Barns (양돈사 내 동물 활동도에 따른 암모니아 및 미세먼지 배출농도 특성 분석)

  • Park, Jinseon;Jeong, Hanna;Lee, Se Yeon;Choi, Lak Yeong;Hong, Se-woon
    • Journal of The Korean Society of Agricultural Engineers
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    • v.63 no.6
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    • pp.117-129
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    • 2021
  • The movement of animals is one of the primary factors that influence the variation of livestock emissions. This study evaluated the relationship between animal activity and three major emissions, PM10, PM2.5, and ammonia gas, in weaning, growing, and fattening pig houses through continuous monitoring of the animal activity. The movement score of animals was quantified by the developed image analysis algorithm using 10-second video clips taken in the pig houses. The calculated movement scores were validated by comparison with six activity levels graded by an expert group. A comparison between PMs measurement and the movement scores demonstrated that an increase of the PMs concentrations was obviously followed by increased movement scores, for example, when feeding started. The PM10 concentrations were more affected by the animal activity compared to the PM2.5 concentrations, which were related to the inflow of external PM2.5 due to ventilation. The PM10 concentrations in the fattening house were 1.3 times higher than those in the weaning house because of the size of pigs while weaning pigs were more active and moved frequently compared to fattening pigs showing 2.45 times higher movement scores. The results also indicated that indoor ammonia concentration was not significantly influenced by animal activity. This study is significant in the sense that it could provide realistic emission factors of pig farms considering animal's daily activity levels if further monitoring is carried out continuously.

Research for the Analytical Method of Various Pesticides in Raw Milk by Gas Chromatography-Mass Spectrometry (GC/MSD를 사용한 원유 내 잔류농약의 분석법 연구)

  • Oh, N.S.;Shin, Y.K.;Baick, S.C.
    • Food Science of Animal Resources
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    • v.29 no.4
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    • pp.482-486
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    • 2009
  • The aim of this study was to optimize a simple, fast, and economical analysis procedure for the determination of 16 different pesticides in raw milk via GC/MSD. Analyses were performed via gas chromatography with electron impact mass spectrometric detection in the selected ion monitoring mode (GC/MSD-SIM) using Pentachloronitrobenzene as the internal standard. The modified sample preparation methodology was based on the Pesticide Analytical Manual (PAM) of the FDA concerning fat extraction, ACN-ether partitioning, and clean-up of the Sep-Pak florisil cartridge. The modified methodology for the determination of the 16 pesticides was validated. The range of LOQs of the 16 pesticides was likely three times lower than their Maximum Residence Levels (MRLs). The recoveries of most of the pesticides were acceptable at the fortification levels of 0.5 and 1.0 ${\mu}g/mL$ and their RSD (%) level was less than 20%. None of the 16 pesticides were detected in the selected raw milk samples.

Year-round Monitoring of Verotoxin-producing Escherichia coli from Feces of Dairy Cattle

  • Kobayashi, Y.;El-Sawy, H.B.I.
    • Asian-Australasian Journal of Animal Sciences
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    • v.20 no.5
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    • pp.789-794
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    • 2007
  • A PCR-aided monitoring of verotoxin-producing Escherichia coli (VTEC) was performed over the period of 12 months by using fresh feces collected monthly from 5 dairy cows that had been identified as VTEC carriers. The PCR products were confirmed to be verotoxin genes by Southern hybridization using a gene fragment of verotoxin 2 as a probe. Although seasonal variation of VTEC shedding seemed to depend on each cow, several factors may have influenced the frequency of detection. Shedding of VTEC tended to be reduced during grazing from the middle of May up to the beginning of October. Only one cow was positive for VTEC in August. Dry-off was also suggested to have a depressive effect on VTEC shedding, i.e. 3 of 4 dry cows showed no shedding of VTEC. Contrary to these factors, winter or indoor rearing tended to increase VTEC with only 5/24 samples being negative during the period from November to April. Total VFA concentration was higher (p<0.05) in VTEC-positive feces than in VTEC-negative feces, while fecal pH and VFA proportions were not different. Partial sequences of verotoxin genes from feces of 4 VTEC-positive cows were nearly identical (99-100%), suggesting that gut bacteria sharing the same gene were distributed among the cows. The present results indicate that grazing and dry-off could be factors which reduce VTEC shedding, while winter/indoor rearing may be a factor which increases the shedding, possibly through on-farm interactions.

Prediction survey on the viral diseases of companion animals in Gwangju area, Korea (광주지역 반려동물 바이러스 질병 예측 조사)

  • Na, Ho-Myung;Bae, Seong-Yeol;Lee, Yeun-Ey;Park, Jae-Sung;Park, Seong-Do;Kim, Eun-Sun;Kim, Yong-Hwan
    • Korean Journal of Veterinary Service
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    • v.36 no.3
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    • pp.187-192
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    • 2013
  • For the monitoring of six viral disease (CIV: canine influenzavirus, CPIV: canine parainfluenzavirus, CHV: canine herpesvirus, CPV2: canine parvovirus type 2, CCoV: canine coronavirus, CNV: canine norovirus) inspections, a total of 300 samples were collected nasal or feces from the companion dogs of animal hospital (n=98) and the abandoned dogs of animal shelters (n=202) in Gwangju, Korea. Using PCR and RT-PCR, CPV2, CPIV and CHV were detected in 55 (18.3%), 11 (3.7%), 1 (0.3%), respectively. CPV2 was highly detected in May, October and November. and CPIV was highly detected in November. But those agents were not detected the virus in March and July. Based on the results of the investigation continuous monitoring for companion and abandoned dogs will be required.

Determination of more than 500 Pesticide Residues in Hen Eggs by Liquid Chromatography-Tandem Mass Spectrometry (LC-MS/MS) and Gas Chromatography-Tandem Mass Spectrometry (GC/MS/MS)

  • Golge, Ozgur;Liman, Turan;Kabak, Bulent
    • Food Science of Animal Resources
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    • v.41 no.5
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    • pp.816-825
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    • 2021
  • This study aims to validate a fast method of simultaneous analysis of 365 LCamenable and 142 GC-amenable pesticides in hen eggs by liquid chromatography-tandem mass spectrometry (LC-MS/MS) and gas chromatography-tandem mass spectrometry (GC-MS/MS), respectively, operating in multiple reaction monitoring (MRM) acquisition modes. The sample preparation was based on quick, easy, cheap, effective, rugged, and safe (QuEChERS) extraction. Key method performance parameters investigated were specificity, linearity, limit of quantification (LOQ), accuracy, precision and measurement uncertainty. The method was validated at two spiking levels (10 and 50 ㎍/kg), and good recoveries (70%-120%) and relative standard deviations (RSDs) (≤20) were achieved for 92.9% of LC-amenable and 86.6% of GC-amenable pesticide residues. The LOQs were ≤10 ㎍/kg for 94.2% of LC-amenable and 92.3% of GC-amenable pesticides. The validated method was further applied to 100 egg samples from caged hens, and none of the pesticides was quantified.

A Tracking Service of Animal Situation using RFID, GPS, and Sensor (RFID, GPS 및 센서를 이용한 동물 상태 추적 서비스)

  • Kim, So-Hyeun;Kim, Do-Hyeun;Park, Hee-Dong
    • The Journal of the Institute of Internet, Broadcasting and Communication
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    • v.9 no.5
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    • pp.79-84
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    • 2009
  • Recently, many researches are being carried out on monitoring animal behaviour and interactions with the environment using sensor networks and for tracing animal chain management and identifying animals using RFID techniques. And we are studying about the management and burglarproof of a pet using GPS technique. But there is a lack of study for providing users intelligence services in zoo using GPS, RFID, and sensor networks. Accordingly, in this paper, we propose a intelligence tracking service of animal situation based on GPS, RFID, and sensor in zoo. Firstly, we present a tracking service scenario of animal situation and system configuration according to this scenario. The proposed service provides users realtime animal situation information of animal like the present location, temperature, image, etc. In addition, we can chase the animals to know a location and situation of animal when the animals escapes from their cages. Next, we implement and test prototype operations of animal tracking system based on this scenario to verify the proposed service.

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Effect of Macleaya cordata and Magnolia officinalis plant extracts on oxidative stress control in lambs fed a high-concentrate diet

  • Lima, Tiago Ronimar Ferreira;Gallo, Sarita Bonagurio;Rosa, Alessandra Fernandes;Silva, Saulo da Luz e;Brochado, Thais;Bezerra, Helena Viel Alves;Putrino, Soraia Marques;Martins, Marcela Buosi;Leme, Paulo Roberto
    • Asian-Australasian Journal of Animal Sciences
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    • v.33 no.6
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    • pp.913-920
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    • 2020
  • Objective: The objective of this experiment was to compare conventional antioxidants and plant extracts for oxidative stress control in lambs fed a high-concentrate diet. Methods: Forty-eight male Dorper×Santa Ines lambs with an initial weight of 20±1.49 kg and 60 days of age, were used to evaluate the effects of feeding a combination of Macleaya cordata and Magnolia officinalis plant extracts (0 vs 320 mg/kg dry matter [DM]) in combination with selenium+vitamin E (0 vs 100 IU/kg DM of vitamin E and 0.1 mg/kg DM of selenium) in a completely randomized block design in a 2×2 factorial arrangement. The animals were housed in individual pens and received a high-concentrate diet consisting of 80% whole corn and 20% protein pellet for 60 days. The animals were weighed at the beginning of the experiment and every 14 days for performance monitoring. Three blood samplings were performed during the experimental period for the evaluation of oxidative and protein parameters. Results: The treatments with vitamin E and selenium as additives had a positive influence on final weight, daily weight gain, carcass weight, and selenium content in longissimus muscle (p = 0.01). Plant extracts tended to improve final weight (p = 0.064) and daily weight gain (p = 0.059), showing similar effect as selenium and vitamin E. There was no effect of treatment on blood proteins, indicating that the animals were healthy throughout the experiment. Conclusion: The use of plant extracts had a similar effect as the addition of selenium and vitamin E, with dietary inclusion of additives resulting in better performance of lambs but both supplements did not have strong influence on oxidative stress.

Characterization of Bacteria and Their Antibiotic Sensitivities in Porcine Liquid Semen (돼지 액상정액 내 세균오염과 항생제 감수성에 관한 연구)

  • Ryu, Jae-Weon;Cho, Kyu-Ho;Hong, Joon-Ki;Kim, Myung-Jick;Park, Jun-Chul;Jung, Il-Byung;Kim, In-Cheul
    • Journal of Animal Science and Technology
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    • v.50 no.6
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    • pp.793-798
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    • 2008
  • The semen collection process in the porcine is far from being a sterile procedure. Consequently, porcine ejaculates commonly contain bacterial contaminants. The aim of this study is to identify the bacteria in porcine semen and to find the antibiotics resistance of bacteria. Twelve porcine originating from four AI center were used to collect semen. Bacteria were identified by automated instrument for rapid organism identification system and bacterial sensitivities of 8 antibiotics were tested. The Bacterial contaminants of Staphylococcus genus(37.8%), Proteus genus(7.0%), Bacillus genus (6.1%), Pasteulla genus(5.7%), Acinetobacte genus(5.2%), Serratia genus(4.3%) and others(33.9%) were frequently isolated. However, amikacin showed higher antibiotic sensitivity than other antibiotics. General sanitation protocols can contribute partly to inhibit the bacterial contamination, with monitoring boar housing, semen collection areas and the extended semen. But, proper selection of preservative antibiotics by microbial sensitivities can minimize the influence of bacteria.

Variations of Size and Density of Sea Cucumber (Stichopus japonicus) Released to the Habitat Conditions (서식 환경에 따른 방류 돌기해삼(Stichopus japonicus)의 크기 및 서식밀도 변화)

  • Lee, Jin Wang;Gil, Hyun Woo;Lee, Do Hyeon;Kim, Ju Kyeong;Hur, Jun Wook
    • Ocean and Polar Research
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    • v.40 no.2
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    • pp.69-75
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    • 2018
  • We investigated the effects of environmental variations on the growth and survival rate of Stichopus japonicus to determine the optimum environmental conditions for its growth. Literature studies and a 12 month-long diver survey were carried out to understand the habitat, ecology and size of the surveyed area. Based on the collected data, we suggested optimum habitat conditions for releasing S. japonicus. Experiments on releasing S. japonicus were conducted in the breakwater of the Hwagye fishing cooperative in Hwagey-ri, Namhae-un, Gyeongsangnam-do, Korea. To implement the experiments, we divided the surveyed area into 4 sub-areas with different characteristics: (1) sand and silt zone; (2) artificial sea cucumber bank zone; (3) artificial rock bank zone; and (4) marine algae zone. The experiment lasted for 12 months. We released 32,000 sea cucumbers over $120m^2$ of each of the sand and silt zone, artificial rock bank zone and marine algae zone and released 6,000 sea cucumbers over $120m^2$ of the artificial sea cucumber bank zone. The average density of the released sea cucumbers from day 30 to day 360 after the releasing was conducted was the highest in the artificial sea cucumber bank zone ($23.7animal/m^2$), which was followed by artificial rock bank zone ($2.0animal/m^2$), marine algae zone ($1.9animal/m^2$) and sand and silt zone ($0.8animal/m^2$). The analysis on growth showed that the initial average weight of 2.3 g increased on day 360 after the releasing to 12.5 g in the artificial sea cucumber rank zone, 20.2 g in the sand and silt zone, 23.3 g in the artificial rock bank zone and 22.9 g in the marine algae zone. Results from the experiment along with the literature analysis suggest the following optimum habitat conditions: $10-15^{\circ}C$ water temperature; 28-34 psu salinity; 5-10 m water depth; 0.2-0.5 m/s velocity; rock, stone and muddy sand as substrate; and less than 20% mud in the substrate.