• Title/Summary/Keyword: Analysis of species of trees

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The Phylogenetic Relationship of Several Oscillatorian Cyanobacteria, Forming Blooms at Daecheong Reservoirs, Based on Partial 16S rRNA Gene Sequences

  • Lee, Wook-Jae;Bae, Kyung-Sook
    • Journal of Microbiology and Biotechnology
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    • v.11 no.3
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    • pp.504-507
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    • 2001
  • The partial 16S gene sequences of six filamentous cyanobacterial strains, Oscillatoria lmosa KCTC AG10168, Oscillatoria princeps KCTC AG10153, Oscillatoria sp. KCTC AG 10184, Phormidium tenue KCTC AG10158, Phormidium parchydematicum KCTC AG10164, and Lyngbya hieronymusii KCTC AG10199, which were isolated in the late summer at Daecheong Reservoirs, were determined and assigned their phylogenetic and taxonomic position among taxa of order Ocillatoriales whose partial 16S rRNA gene sequences aligned in this suty, were very heterogeneously clustered with other taxa. The two strains, Oscillatoria limosa KCTC AG10168 and O. princeps KCTC AG10153, formed a cluster with O. sancta PCC7515, which supported 64% of the bootstrap trees with high similarity (19-96.15%). Strain Oscillatoria sp. KCTC AG10184, that was known to produce a nasty substance, was closely related to the toxic Oscillatoria group. The study on morphological variation in various environments and toxin production will confirm the taxonomic status of these species. Phormidium tenus KCTC AG10158 and Phormidium parchydematicum KCTC AG10164 made a cluster with other oscillatorian species of Phormidium, Oscillatoria, and Leptolynbya, which supproted 100% of the bootstrap trees with a very high sequence smilarity (96.8-99.8%) in thsi study. The sequence analysis in this study also supported that taxa of oscillatoriales are not monophyletic. Some of the fractures, such as the presence or absence of sheath and cell shape, which were used to define them, would be inadequate and should be reconfirmed. We suggest that sequences of partial 16S rRNA gene fragments aligned in this study should be more useful than morphological features in the identification and reconfirmation of the taxonomic status of these oscillactorian cyanobacteria.

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A Study on the Structure of Forest Community of Picea jezoensis Stands at Cheonwangbong Area, Jirisan(Mt.) (지리산국립공원 천왕봉지역 가문비나무림의 산림군집구조)

  • An, Hyun-Cheul;Kim, Gab-Tae;Choo, Gab-Cheul;Um, Tae-Won;Park, Sam-Bong;Park, Eun-Hee
    • Journal of Korean Society of Forest Science
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    • v.99 no.4
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    • pp.590-596
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    • 2010
  • To investigate and to compare the structure of Picea jezoensis forests at Chunwangbong area in the Jirisan National Park, 33 plots(400) were set up by a random sampling method. Dead individuals of Picea jezoensis trees were 15.6%, these were observed mainly in the upper-layer trees. A few seedlings of Picea jezoensis were found in this investigation area. This result indicates that Picea jezoensis might be gradually decreased in the future. Picea jezoensis stands were classified into two major groups by cluster analysis. There were strong positive correlations between Syringa reticulata and Acer pseudosieboldianum, Tripterygium regelii, Quercus serrata; Betula ermani and Lonicera maackii; Euonymus macropterus and Acer ukurunduense; Acer pseudosieboldianum and Tripterygium regelii, and relatively weak negative correlations were showed between Picea jezoensis and Abies koreana; Betula ermani and Acer ukurunduense; Acer pseudosieboldianum and Tripterygium regelii. Species diversity index(H') of investigated groups ranged from 1.0000 to 1.3010.

Variation of Morphological Characteristics and Anthocyanin Contents from Fruit of Vaccinium oldhamii in Korea (정금나무 열매의 형태적 특성과 안토시아닌 함량 변이)

  • Song, Jeong Ho;Cheong, Eun Ju;Kim, Hyeusoo;Kim, Moon Sup;Kim, Sea Hyun
    • Journal of Korean Society of Forest Science
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    • v.104 no.2
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    • pp.193-197
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    • 2015
  • To develop superior cultivars for edible or medicinal purposes, we investigated morphological characteristics and total anthocynin contents for the fruit of 24 individuals from 4 populations in Korea. ANOVA analysis showed significant differences among populations and among individuals within population in all characteristics. The mean characteristics of the species were 8.2 mm, 7.8 mm, 0.4 g, 11.7 Brix., 7.7 ea and 474.4 mg/100 g in the fruit width, fruit length, fruit weight, soluble solids contents, number of fruit per punch and total anthocyanin contents, respectively. Especially, total anthocyanin contents (474.4 mg/100 g) of V. oldhamii showed 1.9 times higher than that of American blueberry (237.3 mg/100 g) using as control. Consequently, the investigation suggests that V. oldhamii fruits can be used to develop the functional cultivars with enhanced health benefits by the selection breeding. Selection effect with outstanding candidate trees including superior 3 individual trees was estimated at 129.6%, 109.5% and 140.5% in fruit weight, number of fruit per punch and total anthocyanin content, respectively.

Sap Outflow Characteristics of Walnut Tree (Juglans sinensis Dode) (호두나무 수액의 유출특성)

  • Kim, Chul-Woo;Kim, Mahn-Jo;Park, Youngki
    • Korean Journal of Plant Resources
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    • v.27 no.2
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    • pp.188-193
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    • 2014
  • The sap outflow characteristics of Juglans sinensis and J. mandshurica were investigated to evaluate the optimum pruning period of walnut tree that there is a sap spill on dormant. The total period of sap outflow were 34 days for both J. sinensis and J. mandshurica. Total amount of sap outflow per tree in J. sinensis and J. mandshurica were 2,922 mL/tree and 3,135 mL/tree, respectively and the period of sap outflow and non sap outflow between two species were similar. ANOVA analysis showed that the amount of sap outflow was significant differences with day of sap outflow but there were no significant differences between species. From the correlation analysis between air-temperature and sap outflow, daily minimum temperature showed a positive correlation at the 1% level of significance (r=0.56 and r=0.46) for both J. sinensis and J. mandshurica. When branch of walnut tree that diameter is 5 cm cut on the period of sap outflow, the sap flowed down the longest period (48 days) but the sap outflow was not observed after budburst. Therefore, our study supported that the pruning have to avoid the period of sap outflow to reduce sap outflow of walnut tree.

Genetic Diversity and Spatial Genetic Structure of Populus koreana Population in Mt. Odae, Korea (오대산 물황철나무(Populus koreana) 집단의 유전다양성 및 공간적 유전구조 분석)

  • Shin, Sookyung;Song, Jeong-Ho;Lim, Hyo-In;Jang, Kyung-Hwan;Hong, Kyung-Nak;Lee, Jei-Wan
    • Journal of Korean Society of Forest Science
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    • v.103 no.1
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    • pp.59-64
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    • 2014
  • This study describes analysis of genetic diversity and spatial genetic structure of Korean poplar (Populus koreana Rehder) in Mt. Odae using I-SSR markers. P. koreana is a deciduous broad-leaved tree species that primarily grows in the alpine valleys of China, Russia and North Korea. In South Korea, P. koreana is found limitedly in Gangwon province. Especially, the population in Mt. Odae is located on the southern limit line, its importance is emphasized from the genetic resource conservation perspective. The Shannon's diversity (I=0.230) and the expected heterozygosity (He=0.151) were relatively low as compared with those of other plant species. Spatial autocorrelation analysis using Tanimoto's distance showed that the genetic patch was founded within 400 m. It is suggested that individual trees for ex situ conservation should be sampled with a minimum distance of 400 m between trees.

A Comparison of Vegetation in Complementary Forests of Villages between Korea and China - Focused on Jinan in Korea and Qingzhou in China - (한국과 중국의 마을비보숲 식생 비교 - 한국(韓國) 진안(鎭安)과 중국(中國) 청주(靑州)를 사례로 -)

  • Park, Jae Chul;Gwan, Dan Dan;Jung, Kyoung Sook
    • Journal of the Korean Institute of Landscape Architecture
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    • v.41 no.6
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    • pp.199-208
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    • 2013
  • The purpose of this study is to compare the vegetation structure in complementary forests of villages between Korea and China. For this study, Jinan in Korea and Qingzhou in China were selected through a pre-survey about the representative regions of both countries. The main research method used was field study. A comparative analysis between the two regions was performed by a frequency analysis of the surveyed data. The data obtained in the study shows the vegetation structure in complementary forests of villages in the two regions have many differences which are related to the local culture. As a result, it was identified that the average number of species was the same at 2.9 and the average number of trees, total number of trees, and tree density in Qingzhou were considerably greater than those in Jinan. Also, it was identified that tree height, average breadth height diameter and crown width in Jinan were considerably greater than those in Qingzhou. Furthermore, it was identified that both the forest state and the principal species of tree are both very different according to the different cultures. Through this identification, it is considered that this study will be helpful in establishing policy direction in both countries about the restoration and management of complementary forests.

Climate Change Impact Assessment of Abies nephrolepis (Trautv.) Maxim. in Subalpine Ecosystem using Ensemble Habitat Suitability Modeling (서식처 적합모형을 적용한 고산지역 분비나무의 기후변화 영향평가)

  • Choi, Jae-Yong;Lee, Sang-Hyuk
    • Journal of the Korean Society of Environmental Restoration Technology
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    • v.21 no.1
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    • pp.103-118
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    • 2018
  • Ecosystems in subalpine regions are recognized as areas vulnerable to climatic changes because rainfall and the possibility of flora migration are very low due to the characteristics of topography in the regions. In this context, habitat niche was formulated for representative species of arbors in subalpine regions in order to understand the effects of climatic changes on alpine arbor ecosystems. The current potential habitats were modeled as future change areas according to the climatic change scenarios. Based on the growth conditions and environmental characteristics of the habitats, the study was conducted to identify direct and indirect causes affecting the habitat reduction of Abies nephrolepis. Diverse model algorithms for explanation of the relationship between the emergence of biological species and habitat environments were reviewed to construct the environmental data suitable for the six models(GLM, GAM, RF, MaxEnt, ANN, and SVM). Weights determined through TSS were applied to the six models for ensemble in an attempt to minimize the uncertainty of the models. Based on the current climate determined by averaging the climates over the past 30years(1981~2010) and the HadGEM-RA model was applied to fabricate bioclimatic variables for scenarios RCP 4.5 and 8.5 on the near and far future. The results of models of the alpine region tree species studied were put together and evaluated and the results indicated that a total of eight national parks such as Mt. Seorak, Odaesan, and Hallasan would be mainly affected by climatic changes. Changes in the Baekdudaegan reserves were analyzed and in the results, A. nephrolepis was predicted to be affected the most in the RCP8.5. The results of analysis as such are expected to be finally utilizable in the survey of biological species in the Korean peninsula, restoration and conservation strategies considering climatic changes as the analysis identified the degrees of impacts of climatic changes on subalpine region trees in Korean peninsula with very high conservation values.

Analysis of Designation and Symbolic Meanings of Floral Emblems in South Korea as Elements of Garden Tourism and Design

  • Kim, Inhea;Park, Jin-Sil;Choi, Kyoung-Ok
    • Journal of People, Plants, and Environment
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    • v.23 no.1
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    • pp.87-99
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    • 2020
  • This study was conducted to analyze the current state and symbolic meanings of floral emblem designation in local governments of South Korea. The scope of local governments subject to analysis was limited to special city, metropolitan city, province, self-governing province, city, self-governing city, county and district based on their administrative divisions. The floral emblems of local governments and their symbolic meanings as of 2019 were examined. A total of 44 plant species were designated as floral emblems. Many plant species with high designation frequency were included in Rhododendron spp., Rosa spp., Camellia spp., Magnolia spp., and Prunus spp.. Plant species with higher designation frequency tended to have more symbolic meanings. A total of 155 terms were used for the symbolic meanings assigned to all the designated floral emblems. The major symbolic meanings were relevant to material affluence or economic growth, community spirit, and personality generally required from local residents. Most of the plant species linked to the top 10 most frequently assigned terms in symbolic meaning were those of the top 10 most frequently designated floral emblems. In the case of floral emblems with high designation frequency, it was shown that they were linked with various symbolic meanings in order to grant identity with regional distinctiveness and differentiation, regardless of the symbolic meaning that the designated flowers generally have. However, the floral emblems with low designation frequency seem to have relatively strong physical or emotional relevance with local governments and thus are expected to have high utilization in regional branding and tourism marketing.

Morphology and Molecular Phylogeny of Raillietina spp. (Cestoda: Cyclophyllidea: Davaineidae) from Domestic Chickens in Thailand

  • Butboonchoo, Preeyaporn;Wongsawad, Chalobol;Rojanapaibul, Amnat;Chai, Jong-Yil
    • Parasites, Hosts and Diseases
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    • v.54 no.6
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    • pp.777-786
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    • 2016
  • Raillietina species are prevalent in domestic chickens (Gallus gallus domesticus) in Phayao province, northern Thailand. Their infection may cause disease and death, which affects the public health and economic situation in chicken farms. The identification of Raillietina has been based on morphology and molecular analysis. In this study, morphological observations using light (LM) and scanning electron microscopies (SEM) coupled with molecular analysis of the internal transcribed spacer 2 (ITS2) region and the nicotinamide adenine dinucleotide dehydrogenase subunit 1 (ND1) gene were employed for precise identification and phylogenetic relationship studies of Raillietina spp. Four Raillietina species, including R. echinobothrida, R. tetragona, R. cesticillus, and Raillietina sp., were recovered in domestic chickens from 4 districts in Phayao province, Thailand. LM and SEM observations revealed differences in the morphology of the scolex, position of the genital pore, number of eggs per egg capsule, and rostellar opening surface structures in all 4 species. Phylogenetic relationships were found among the phylogenetic trees obtained by the maximum likelihood and distance-based neighbor-joining methods. ITS2 and ND1 sequence data recorded from Raillietina sp. appeared to be monophyletic. The query sequences of R. echinobothrida, R. tetragona, R. cesticillus, and Raillietina sp. were separated according to the different morphological characters. This study confirmed that morphological studies combined with molecular analyses can differentiate related species within the genus Raillietina in Thailand.

Lignin signatures of vegetation and soils in tropical environments

  • Belanger, E.;Lucotte, M.;Gregoire, B.;Moingt, M.;Paquet, S.;Davidson, R.;Mertens, F.;Passos, C.J.S.;Romana, C.
    • Advances in environmental research
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    • v.4 no.4
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    • pp.247-262
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    • 2015
  • The few lignin biomarker studies conducted in tropical environments are hampered by having to use references signatures established for plants and soils characteristic of the temperate zone. This study presents a lignin biomarker analysis (vanillyls (V), p-hydroxyls (P), syringyls (S), cinnamyls (C)) of the dominant plant species and soil horizons as well as an analysis of the interrelated terrigenous organic matter (TOM) dynamics between vegetation and soil of the $Tapaj{\acute{o}}s$ river region, an active colonization front in the Brazilian Amazon. We collected and analyzed samples from 17 fresh dominant plant species and 48 soil cores at three depths (0-5 cm, 20-25 cm, 50-55 cm) from primary rainforest, fallow forest, subsistence agriculture fields and pastures. Lignin signatures in tropical plants clearly distinguish from temperate ones with high ratios of Acid/aldehyde of vanillyls ((Ad/Al)v) and P/V+S. Contrary to temperate environments, similarly high ratios in tropical soils are not related to TOM degradation along with pedogenesis but to direct influence of plants growing on them. Lignin signatures of both plants and soils of primary rainforest and fallow forest clearly distinguish from those of non-forested areas, i.e., agriculture fields and pastures. Attalea speciosa Palm trees, an invasive species in all perturbed landscapes of the Amazon, exhibit lignin signatures clearly distinct from other dominant plant species. The study of lignin signatures in tropical areas thus represents a powerful tool to evaluate the impact of primary rainforest clearing on TOM dynamics in tropical areas.