• 식물조직배양학회지
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• 제27권1호
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• pp.39-45
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• 2000

전위유전자 표지를 이용한 2배체 야생근연종 감자의 유용 유전자 cloning 체계를 개발하기 위하여 옥수수의 진위유전자 Ac를 조작하여 전위효소는 생산하나 이동은 불가능하도록 제작된 immobilized Ac (iAc)와 자체 이동은 불가능하나 iAc의 작용에 의해 이동이 가능한 Ds를 Agrobacterium tumefaciens를 이용한 형질전환에 의해 2배체 근연종 감자 (Solanum tuberosum Group Phureja) 계통 1.22에 도입하였다. iAc및 Ds 삽입 binary vector들을 보유하는Agrobacterium 계통들로 형질전환 처리된 1.22 기내배양신초의 잎과 줄기 절편의 경우 50mg/L 의 kanamycin이 첨가된 배지에서도 캘러스를 형성하였으며, 잎 절편으로부터 재분화신초가 획득되었다. 형질전환 처리되지 않은 1.22 신초는 100mg/L의 kanamycin이 첨가된 배지에서 전혀 발근이 되지 않았으나, 형질전환 처리에 의해 획득된 재분화 신초는 동일 배지에서 발근이 되었다. iAc와 Ds의 염기배열에 대해 특이적인 oligonucleotide primer들을 이용하여 형질전환 처리 획득 식물들로부터 추출된 DNA에 대한 PCR분석을 실시한 결과, 사용된 primer들의 iAc 와 Ds의 염기배열에 있어서의 위치에 의해 예상되는 크기의 DNA들이 형성되어 iAc 와 Ds의 1.22 genome내 도입이 확인되었다.

• 한국식물학회:학술대회논문집
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• 한국식물학회 1999년도 제13회 식물생명공학심포지움 New Approaches to Understand Gene Function in Plants and Application to Plant Biotechnology
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• pp.17-20
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• 1999

In rice, limited efforts have been made to identify genes by the use of insertional mutagens, especially heterologous transposons such as the maize Ac/Ds. We constructed Ac and gene trap Ds vectors and introduced them into the rice genome by Agrobacterium-mediated transformation. In this report, rice plants that contained single and simple insertions of T-DNA were analyzed in order to evaluate the gene-tagging efficiency. The 3'end of Ds was examined for putative splicing donor sites. As observed in maize, three splice donor sites were identified at the 3'end of the Ds in rice. Nearly 80% of Ds elements wered excised from the original T-DNA sites, when Ac cDNA was expressed under a CaMV 35S promoter. Repetitive ratoon culturing was performed to induce new transpositions of Ds in new plants derived from cuttings. About 30% of the plants carried at least one Ds that underwent secondary transposition in the later cultures. 8% of transposed Ds elements expressed GUS in various tissues of rice panicles. With cloned DNA adjacent to Ds, the genomic complexities of the insertion sites were examined by Southern hybridization. Half of the Ds insertion sites showed simple hybriodization patterns which could be easily utilized to locate the Ds. Our data demonstrate that the Ac/Ds mediated gene trap system could prove an excellent tool for the analysis of functions of genes in rice. We discuss genetic strategies that could be employed in a largee scale mutagenesis using a heterologous Ac/Ds family in rice.

• 한국식물학회:학술대회논문집
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• 한국식물학회 1985년도 워크샵 및 심포지엄 북한산국립공원의 식생
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• pp.59-71
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• 1985

In rice, limited efforts have been made to identify genes by the use of insertional mutagens, especially heterologous transposons such as the maize Ac/Ds. We constructed Ac and gene trap Ds vectors and introduced them into the rice genome by Agrobacterium-mediated transformation. In this report, rice plants that contained single and simple insertions of T-DNA were analyzed in order to evaluate the gene-tagging efficiency. The 3'end of Ds was examined for putative splicing donor sites. As observed in maize, three splice donor sites were identified at the 3'end of the Ds in rice. Nearly 80% of Ds elements wered excised from the original T-DNA sites, when Ac cDNA was expressed under a CaMV 35S promoter. Repetitive ratoon culturing was performed to induce new transpositions of Ds in new plants derived from cuttings. About 30% of the plants carried at least one Ds that underwent secondary transposition in the later cultures. 8% of transposed Ds elements expressed GUS in various tissues of rice panicles. With cloned DNA adjacent to Ds, the genomic complexities of the insertion sites were examined by Southern hybridization. Half of the Ds insertion sites showed simple hybriodization patterns which could be easily utilized to locate the Ds. Our data demonstrate that the Ac/Ds mediated gene trap system could prove an excellent tool for the analysis of functions of genes in rice. We discuss genetic strategies that could be employed in a largee scale mutagenesis using a heterologous Ac/Ds family in rice.

• 식물조직배양학회지
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• 제21권6호
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• pp.319-326
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• 1994

십자화과 식물의 유용유전자를 cloning하기 위한 기초연구로서 십자화과 식물인 Armoracia rusicna의 재분화계와 형질전환계를 확립하고, gene tagging을 하기 위하여 binary vector에 삽입된 옥수수의 transposon 유전자 Ac/Ds를 도입한 결과, NAA 0.1 mg/L와 BA 1.0 mg/L를 함유한 MS 배지에서 최적의 shoot를 유기할 수 있었으며, MS 기본배지에 옮기면 쉽게 발근을 유도할 수 있었다. 옥수수의 Ac/Ds의 유전자를 잎에 형질전환시킨 결과 8-10%의 형질전환율을 보였으며, 엽병의 경우에도 4%의 형질전환 식물체가 얻어졌다. Kanamycin 100 mg/L 농도에서 선발한 개체를 PCR 분석 및 Southern blot분석을 행하였던 결과 PCR분석으로부터 Ds유전자가 식물에 도입된 것이 확인되었고, Southern blot 분석으로부터 Ac/Ds 모두가 도입된 것이 확인되었다.

• 한국식물생명공학회:학술대회논문집
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• 한국식물생명공학회 2005년도 추계학술대회 및 한일 식물생명공학 심포지엄
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• pp.95-105
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• 2005

Transposon-mediated insertional mutagenesis provides one of the most powerful tools for functional studies of genes in higher plants. This project has been performed to develop a large population of insertional mutations, and to construct databases of molecular information on Ds insertion sites in rice. Ultimate goals are to supply genetic materials and information to analyze gene function and to identify and utilize agronomically important genes for breeding purpose. Two strategies have been employed to generate the large scale of transposon population in a Japonica type rice, Dongjin Byeo; 1) genetic crosses between Ac and Ds lines and 2) plant regeneration from seeds carrying Ac and Ds. Our study showed that over 70% of regenerated plants generally carried independent Ds elements and high activity of transposition was detected only during regeneration period. Ds-flanking DNA amplified from leaf tissues of F2 and T1 (or T2) plants have been amplified via TAIL-PCR and directly sequenced. So far, over 65,000 Ds lines have been generated and over 9,500 Ds loci have been mapped on chromosomes by sequence analysis. Database of molecular information on Ds insertion sites has been constructed, and has been opened to the public and will be updated soon at http://www.niab.go.kr. Detailed functional analysis of more than 30 rice mutants has been performed. Several Ds-tagged rice genes that have been selected for functional analysis will be briefly introduced. We expect that a great deal of information and genetic resources of Ds lines would be obtained during the course of this project, which will be shared with domestic and international rice researchers. In addition to the Japonica rice, we have established the tagging system in an rice line of indica genetic background, MGRI079. MGRI079 (Indica/Japonica) was transformed with Agrobacteria carrying Ac and Ds T-DNA vectors. Among transgenic lines, we successfully identified single-copy Ds and Ac lines in MGR1079. These lines were served as ‘starter lines’ to mutagenize Indica genetic background. To achieve rapid, large scale generation of Ds transposant lines, MGR1079 transformants carrying homozygous Ac were crossed with ones with homozygous Ds, and $F_2$seeds were used for plant regeneration. In this year, over 2,000 regeneration plants were grown in the field. We are able to evaluate the tagging efficiency in the Indica genetic background in the fall.

• Genomics & Informatics
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• 제6권2호
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• pp.64-67
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• 2008

The Korean Rice Ds-tagging lines Database (KRDD) is designed to provide information about Ac/Ds insertion lines and activation tagging lines using japonica rice. This database has provided information on 18,158 Ds lines, which includes the ID, description, photo image, sequence information, and gene characteristics. The KRDD is visualized using a web-based graphical view, and anonymous users can query and browse the data using the search function. It has four major menus of web pages: (i) a Blast Search menu of a mutant line; Blast from rice Ds-tagging mutant lines; (ii) a primer design tool to identify genotypes of Ds insertion lines; (iii) a Phenotype menu for Ds lines, searching by identification name and phenotype characteristics; and (iv) a Management menu for Ds lines.

• Plant Breeding and Biotechnology
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• 제6권4호
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• pp.313-320
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• 2018

Rice is the staple food of more than 50% of the world population. Cultivated rice has the AA genome (diploid, 2n = 24) and small genome size of only 430 megabase (haploid genome). As the sequencing of rice genome was completed by the International Rice Genome Sequencing Project (IRGSP), many researchers in the world have been working to explore the gene function on rice genome. Insertional mutagenesis has been a powerful strategy for assessing gene function. In maize, well characterized transposable elements have traditionally been used to clone genes for which only phenotypic information is available. In rice endogenous mobile elements such as MITE and Tos have been used to generate gene-tagged populations. To date T-DNA and maize transposable element systems have been utilized as main insertional mutagens in rice. The Ac/Ds system offers the advantage of generating new mutants by secondary transposition from a single tagged gene. To enhance the efficiency of gene detection, advanced gene-tagging systems (i.e. activation, gene or enhancer trap) have been employed for functional genomic studies in rice. Internationally, there have been many projects to develop large scales of insertional mutagenized populations and databases of insertion sites has been established. Ultimate goals of these projects are to supply genetic materials and informations essential for functional analysis of rice genes and for breeding using agronomically important genes. In this report, we summarize the current status of Ac/Ds-mediated gene tagging systems that has been conducted by collaborative works in Korea.

• Journal of Power Electronics
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• 제10권5호
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• pp.468-476
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• 2010

This paper proposes and develops a new direct voltage control (DVC) approach. This method is designed to be applied in various applications for AC drives fed with a three-phase voltage source inverter (VSI) working with a constant switching time interval as in the standard direct torque control (DTC) scheme. Based on a very strong min(max) criterion dedicated to selecting the inverter voltage vector, the developed DVC scheme allows the generation of accurate voltage forms of waves. The DVC algorithm is implemented on a dSPACE DS1104 controller board and then compared with the space vector pulse width modulation technique (SVPWM) in an open loop AC drive circuit. To demonstrate the efficiency of the developed algorithm in real time and in closed loop AC drive applications, a scalar control scheme for induction motors is successfully implemented and experimentally studied. Practical results prove the excellent performance of the proposed control approach.

• Molecules and Cells
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• 제21권2호
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• pp.284-293
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• 2006

Even though Ac/Ds gene-tagging systems have been established in many higher plants, maize is the only major plant in which short-distance transposition of Ac/Ds has been utilized to probe gene function. This study was performed to evaluate the efficiency of obtaining new alleles and functional revertants from Ds insertion loci in rice. By analyzing 1,580 plants and the progeny of selected lines, the insertion sites and orientations of Ds elements within 16 new heritable alleles of three rice loci were identified and characterized. Intragenic transposition was detected in both directions from the original insertion sites. The closest interval was 35 bp. Three of the alleles had two Ds elements in cis configuration in the same transcription units. We also analyzed the excision footprints of intragenic and extragenic transpositions in Ds-inserted alleles at 5 loci. The 134 footprints obtained from different plants revealed predominant patterns. Ds excision at each locus left a predominant footprint at frequencies of 30-75%. Overall, 66% of the footprints were 7-bp additions. In addition, 16% of the excisions left 0-, 3-, 6-, and 9-bp additions with the potential of conserving reading frame.

• 한국생명과학회:학술대회논문집
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• 한국생명과학회 2000년도 제28회 학술심포지엄
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• pp.11-14
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• 2000