• Applied Microscopy
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• v.34 no.1
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• pp.13-21
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• 2004

The high voltage electron microscope (HVEM) newly installed in KBSI is an advanced transmission electron microscope capable of atomic resolution (${\leq}1.2{\AA}$ point-to-point resolution) together with high titling function (${\pm}60^{\circ}$), which are suitable to do 3-dimensional atomic imaging of a specimen. In addition, the instrument can be controlled by remote operation system, named as 'FasTEM' for the HVEM, which is favorable to overcome some environmental obstacles resulting from the direct operation. The FasTEM remote operation system has been established between the headquarter of KBSI in Daejeon and the Seoul branch. The server system in the headquarter has been connected with a portable client console system in the Seoul branch using an advanced internet resource, 'KOREN' of 155 Mbps grade. Most of the HVEM functions essential to do remote operation are available on the portable client console. The experiment to acquire the high resolution image of [001] Au has been achieved by excellent transmission of control signals and communication with the HVEM. Real-time reaction like direct operation, such as controls of the illumination and projection parameters, acquisition and adjustment of each detector signal, and electrical steering of each motor-driven system has been realized in remote site. It is positively anticipated that the first remote operation of HVEM in conjunction with IT infraengineering plays a important role in constructing the network based e-Science Grid in Korea for national user s facilities.

• Progress in Medical Physics
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• v.13 no.4
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• pp.202-208
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• 2002

The purpose of this study is to evaluate the monitor unit obtained from various methods for the treatment of superficial cancers using electron beams. Thirty-three breast cancer patients who were treated in our institution with 6, 9, and 12 MeV electron beams, were selected for this study. For each patient, irregularly shaped treatment blocks were drawn on simulation film and constructed. Using the irregular blocks, monitor units to deliver 100 cGy to the dose maximum (dmax) were calculated from measurement and three-dimensional radiation treatment planning (3D RTP) system (PINNACLE 6.0, ADAC Laboratories, Milpitas CA) Measurements were made in solid water phantom with plane parallel (PP) chamber (Roos, OTW Germany) at 100 cm source-to surface distances. CT data was used to investigate the effect of heterogeneity. Monitor units were calculated by overriding CT values with 1 g/㎤ and in the presence of heterogeneity. The monitor unit values obtained by the above methods were compared. The dose, obtained from measurement in solid water phantom was higher than that of RTP values for irregularly shaped blocks. The maximum differences between monitor unit calculated in flat water phantom at gantry zero position were 4% for 6 MeV and 2% for 9 and 12 MeV electrons. When CT data was used at a various gantry angle the agreement between the TPS data with and without density correction was within 3% for all energies. These results indicate that there are no significant difference in terms of monitor unit when density is corrected for the treatment of breast cancer patients with electrons.

• Journal of the Korean Society of Marine Environment & Safety
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• v.13 no.3
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• pp.173-181
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• 2007

A three-dimensional ecological model (EMT-3D) was applied to Tokyo Bay for the simulation of PFOA. EMT-3D was calibrated with seawater analysis data obtained from the study area in 2004. The simulated results of dissolved PFOA were in good agreement with the observed values, with a correlation coefficient(R) of 0.7115${\sim}$0.8759 and a coefficient of determination $(R^2)$ of 0.5062${\sim}$0.7672. The results of sensitivity analysis showed that partition rate, adsorption rate and settling rate were important factors for PFOA in particulate organic matter. In the case of PFOA in phytoplankton, bioconcentration factor, uptake rate and partition rate were important factors. Therefore, the parameters must be carefully considered in the modeling. In the case of 50% and 80% total loads reduction, concentration of dissolved PFOA was shown to be lower than 20ng/L and 10ng/L, respectively. In the case of reduction of loads from rivers in each prefecture, Tokyo prefecture was found to have the most influence on the change of dissolved PFOA in surface water while Chiba prefecture was found to have the most influnce on the change of dissolved PFOA in bottom water.

• Geophysics and Geophysical Exploration
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• v.20 no.2
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• pp.88-95
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• 2017

Chogye basin, which is surrounded by country rock, has a closed-basin form. In such a basin, incident seismic energy can form multiply reflected waves, thus causing energy concentration to occur at this closed-basin area. Microtremor measurement survey was performed at the Chogye basin, which is located in Chogye-myeon and Jeokjungmyeon, Hapcheon-gun, Gyeongsangnam-do, Republic of Korea. Microtremor data were transformed into the frequency domain, and then the horizontal-to-vertical spectral ratios (HVSR) were calculated. Fundamental resonance frequencies were estimated from the HVSR results for every observation point. Using the empirical relationship between site period and thickness for sediment sites in Korea known from the previous study, the distribution of sediment thickness of the Chogye basin was estimated from the fundamental resonance frequencies. Being compared with the mountainous rim with steep slope, the measurement points inside the basin have low values of the fundamental resonance frequency with the minimum of 1.03 Hz, which corresponds to the thickness of sedimentary layer with the maximum depth of about 100 m. A three-dimensional basin model was constructed for bedrock topography of the Chogye basin by an interpolation of basin depths estimated at each measurement site.

• Journal of dental hygiene science
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• v.15 no.2
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• pp.226-231
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• 2015

The purpose of this study was to evaluate the accuracy of model according to three types of dental scanner. A maxillary acrylic model was prepared and duplicated 10 times by silicone impression materials. Corresponding working casts were formed from scannable stone and got a 3-dimensional digital models using three different scanners. The distance of each measurement region was measured using vernier calipers and the respective program. One-way ANOVA and the Tukey honestly significant difference post hoc test (${\alpha}=0.05$) was performed using IBM SPSS Statistics 21.0. Overall, the stone cast is smaller than the digital models in measurement distance. And measuring point value of laser scanner showed the most similar values and measurement points value of digital vernier calipers. Digital model of white light scanner showed similar values in the measurement points value of the blue light scanner. In conclusion, the laser scanner showed the best accuracy among the three types of dental scanner. However, the difference between the digital models and the stone cast can be accommodated in making prostheses. Thereby, three types of dental scanner are available in a clinically acceptable range.

• Journal of the Korea Society for Simulation
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• v.22 no.2
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• pp.101-107
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• 2013

Because forest fires are predicted to increase in severity and frequency under global climate change with important environmental implications, an understanding of fire dynamics is critical for mitigation of these negative effects. For the reason, researchers with different background, such as ecologists, physicists, and mathematical biologists, have developed the simulation models to mimic the forest fire spread patterns. In this study, we suggested a novel model considering the wind effect. Our theoretical forest was comprised of two different tree species with varying probabilities of transferring fire that were randomly distributed in space at densities ranging from 0.0 (low) to 1.0 (high). We then studied the distributional patterns of burnt trees using a two-dimensional stochastic cellular automata model with minimized local rules. We investigated the time, T, that the number of burnt trees reaches 25% of the whole trees for different values of the initial tree density, fire transition probability, and the degree of wind strength. Simulation results showed that the values of T decreased with the increase of tree density, and the wind effect decreased in the case of too high or low tree density. We believe that our model can be a useful tool to explore forest fire spreading patterns.

• Proceedings of the Korean Vacuum Society Conference
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• 2011.08a
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• pp.293-294
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• 2011

It is known that semiconductor quantum-dot (QD) heterostructures have superior zero-dimensional quantum confinement, and they have been successfully applied to semiconductor laser diodes (QDLDs) for optical communication and infrared photodetectors (QDIPs) for thermal images [1]. The self-assembled QDs are normally formed at Stranski-Krastanov (S-K) growth mode utilizing the accumulated strain due to lattice-mismatch existing at heterointerfaces between QDs and cap layers. In order to increase the areal density and the number of stacks of QDs, recently, sub-monolayer (SML)-thick QDs (SQDs) with reduced strain were tried by equivalent thicknesses thinner than a wetting layer (WL) existing in conventional QDs (CQDs) by S-K mode. Despite that it is very different from CQDs with a well-defined WL, the SQD structure has been successfully applied to QDIP[2]. In this study, optical characteristics are investigated by using photoluminescence (PL) spectra taken from self-assembled InAs/GaAs QDs whose coverage are changing from submonolayer to a few monolayers. The QD structures were grown by using molecular beam epitaxy (MBE) on semi-insulating GaAs (100) substrates, and formed at a substrate temperature of 480$^{\circ}C$ followed by covering GaAs cap layer at 590$^{\circ}C$. We prepared six 10-period-stacked QD samples with different InAs coverages and thicknesses of GaAs spacer layers. In the QD coverage below WL thickness (~1.7 ML), the majority of SQDs with no WL coexisted with a small amount of CQDs with a WL, and multi-peak spectra changed to a single peak profile. A transition from SQDs to CQDs was found before and after a WL formation, and the sublevel of SQDs peaking at (1.32${\pm}$0.1) eV was much closer to the GaAs bandedge than that of CQDs (~1.2 eV). These revealed that QDs with no WL could be formed by near-ML coverage in InAs/GaAs system, and single-mode SQDs could be achieved by 1.5 ML just below WL that a strain field was entirely uniform.

• Journal of the Computational Structural Engineering Institute of Korea
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• v.30 no.2
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• pp.111-117
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• 2017

In this paper, a local deformation effect in thin-walled box beams is investigated via a finite element modal analysis. The analysis is carried out for single-cell and multi-cell box beam configurations. The single-cell box beam with and without a neck, which mimics a simple wind-turbine blade, is analyzed first. The results obtained by shell elements are compared to those of one-dimensional(1D) beam elements. It is observed that the wall thickness plays a crucial role in the natural frequencies of the beam. The 1D beam analysis deviates from the shell analysis when the wall thickness is either thin or thick. The shell modes(local deformations) are dominant as it becomes thin, whereas the shear deformation effects are significant as it does thick. The analysis is extended to the single-cell box beam with a neck, in which the shell modes are confined to near the neck. Finally the multi-cell box beam with a taper, which is quite similar to real wind-turbine blade configuration, is considered to investigate the local deformation effect. The results reveal that the 1D beam analysis cannot match with the shell analysis due to the local deformation, especially for the lagwise frequencies. There are approximately 5~7% errors even if the number of segments is increased.

• Proceedings of the Korea Crystallographic Association Conference
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• 2003.05a
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• pp.18-18
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• 2003

Thioredoxin (Trx) is a small redox protein that is ubiquitously distributed from achaes to human. In diverse organisms, the protein is involved in various physiological roles by acting as electron donor and regulators of transcription and apoptosis as well as antioxidants. Sequences of Trx within various species are 27～69% identical to that of E. coli and all Trx proteins have the same overall fold, which consists of central five β strands surrounded by four α helices. The N-terminal cysteine in WCGPC motif of Trx is redox sensitive and the motif is highly conserved. Compared with general cysteine, the N-terminal cysteine has low pKa value. The result leads to increased reduction activity of protein. Recently, novel thio.edoxin-related protein (TRP14) was found from rat brain. TRP14 acts as disulfide reductase like Trx1, and its redox potential and pKa are similar to those of Trx1. However, TRP14 takes up electrons from cytosolic thioredoxin reductase (TrxR1), not from the mitochondrial thioredoxin reductase (TrxR2). Biological roles of TES14 were reported to be involved in regulating TNF-α induced signaling pathways in different manner with Trx1. In depletion experiments, depletion of TRP14 increased TNF-α induced phosphorylation and degradation of IκBα more than the depletion Trx1 did. It also facilitated activation of JNK and p38 MAP kinase induced by TNF-α. Unlike Trx1, TRP14 shows neither interaction nor interference with ASK1. Here, we determined three-dimensional crystal structure of TRP14 by MAD method at 1.8Å. The structure reveals that the conserved cis-Pro (Pro90) and active site-W-C-X-X-C motif, which may be involved in substrate recognition similar to Trx1 , are located at the beginning position of strand β4 and helix α2, respectively. The TRP14 structure also shows that surface of TRP14 in the vicinity of the active site, which is surrounded by an extended flexible loop and an additional short a helix, is different from that of Trx1. In addition, the structure exhibits that TRP14 interact with a distinct target proteins compared with Trx1 and the binding may depend mainly on hydrophobic and charge interactions. Consequently, the structure supports biological data that the TRP14 is involved in regulating TNF-α induced signaling pathways in different manner with Trx1.

• Macromolecular Research
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• v.10 no.1
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• pp.2-12
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• 2002

The small-angle X-ray scattering (SAXS) beamline BL4C1 at the 2.5 GeV storage ring of the Pohang Accelerator Laboratory (PAL) has been in its first you of operation since August 2000. During this first stage it could meet the basic requirements of the rapidly growing domestic SAXS user community, which has been carrying out measurements mainly on various polymer systems. The X-ray source is a bending magnet which produces white radiation with a critical energy of 5.5 keV. A synthetic double multilayer monochromator selects quasi-monochromatic radiation with a bandwidth of ca. 1.5%. This relatively low degree of monochromatization is sufficient for most SAXS measurements and allows a considerably higher flux at the sample as compared to monochromators using single crystals. Higher harmonics from the monochromator are rejected by reflection from a flat mirror, and a slit system is installed for collimation. A charge-coupled device (CCD) system, two one-dimensional photodiode arrays (PDA) and imaging plates (IP) are available its detectors. The overall performance of the beamline optics and of the detector systems has been checked using various standard samples. While the CCD and PDA detectors are well-suited for diffraction measurements, they give unsatisfactory data from weakly scattering samples, due to their high intrinsic noise. By using the IP system smooth scattering curves could be obtained in a wide dynamic range. In the second stage, stating from August 2001, the beamline will be upgraded with additional slits, focusing optics and gas-filled proportional detectors.