• Title/Summary/Keyword: 첨단

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Microbial Forensics: Comparison of MLVA Results According to NGS Methods, and Forensic DNA Analysis Using MLVA (미생물법의학: 차세대염기서열분석 방법에 따른 MLVA 결과 비교 및 이를 활용한 DNA 감식)

  • Hyeongseok Yun;Seungho Lee;Seunghyun Lim;Daesang Lee;Sehun Gu;Jungeun Kim;Juhwan Jeong;Seongjoo Kim;Gyeunghaeng Hur;Donghyun Song
    • Journal of the Korea Institute of Military Science and Technology
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    • v.27 no.4
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    • pp.507-515
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    • 2024
  • Microbial forensics is a scientific discipline for analyzing evidence related to biological crimes by identifying the origin of microorganisms. Multiple locus variable number tandem repeat analysis(MLVA) is one of the microbiological analysis methods used to specify subtypes within a species based on the number of tandem repeat in the genome, and advances in next generation sequencing(NGS) technology have enabled in silico anlysis of full-length whole genome sequences. In this paper, we analyzed unknown samples provided by Robert Koch Institute(RKI) through The United Nations Secretary-General's Mechanism(UNSGM)'s external quality assessment exercise(EQAE) project, which we officially participated in 2023. We confirmed that the 3 unknown samples were B. anthracis through nucleic acid isolation and genetic sequence analysis studies. MLVA results on 32 loci of B. anthracis were analysed by using genome sequences obtained from NGS(NextSeq and MinION) and Sanger sequencing. The MLVA typing using short-reads based NGS platform(NextSeq) showed a high probability of causing assembly error when a size of the tandem repeats was grater than 200 bp, while long-reads based NGS platform(MinION) showed higher accuracy than NextSeq, although insertion and deletion was observed. We also showed hybrid assembly can correct most indel error caused by MinION. Based on the MLVA results, genetic identification was performed compared to the 2,975 published MLVA databases of B. anthracis, and MLVA results of 10 strains were identical with 3 unkonwn samples. As a result of whole genome alignment of the 10 strains and 3 unknown samples, all samples were identified as B. anthracis strain A4564 which is associated with injectional anthrax isolates in heroin users.

Formulation of Industrial Policy for Nurturing the Bio-medical Sector: A Case Study on the Construction the Bio-medical Complexes of Korea (첨단 의료산업분야 정책형성과정 연구 -첨단의료복합단지 조성정책을 중심으로-)

  • Jeong, Yong-Il;Kim, Sang-Tae
    • Journal of Korea Technology Innovation Society
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    • v.16 no.3
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    • pp.839-860
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    • 2013
  • Drawing on a case of the construction of high-tech medical complexes, this study demonstrates the process of policy formuation. Beause the construction of high-tech medical complexes involves various analytic elements, and changes of political, economic and social environment, Kingdon's Policy Stream Framework is employed for analysis. The analysis ranges from the embarkment of the Presidential Committee on Healthcare Industry Innovation (PCHII) in August, 2005, to the enactment of High-tech Medical Complex Special Act in March, 2008. The analysis illuminates that policy formulation from agenda setting to enactment in the area of biomedical industry involves multiple factors and policy streams. An enactment of policy agenda particularly depends on the roles of multiple stakeholders as welll as policy leaders.

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Methodology for Estimating Safety Benefits of Advanced Driver Assistant Systems (첨단 운전자지원시스템의 교통안전 효과추정 방법론)

  • Jeong, Eunbi;Oh, Cheol
    • The Journal of The Korea Institute of Intelligent Transport Systems
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    • v.12 no.3
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    • pp.65-77
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    • 2013
  • Recent advanced sensors and communication technologies have been widely applied to advanced safety vehicle (ASV) for reducing traffic accident and injury severity. To apply the advanced safety vehicle technologies, it is important to quantify the safety benefits, which is a fundamental for justifying application. This study proposed a methodology for quantifying the effectiveness of the advanced driver assistant system (ADAS), and applied the methodology to lane departure warning system (LDWS) and automatic emergency braking system (AEBS) which are typical advanced driver assistant systems. When the proposed methodology is applied to 2008-2010 gyeonggi-province crash data, LDWS would reduce about 10~14% of relevant crashes such as head-on, run-off-the road, rollover and fixed-object collisions on the road. In addition, AEBS could potentially prevent about 50% of total rear-end crashes. The outcomes of this study support decision making for developing not only vehicular technology but also relevant safety policies.

Prevention Effect of Poly-gamma-glutamic Acid on Porcine Ligament Tissue Damage Induced by Gamma Irradiation (Poly-gamma-glutamic acid의 방사선 조사에 의한 인대 조직 손상 보호 효과)

  • Kim, Jeongsoo;Sung, Nak-Yun;Park, Jong-Heum;Kim, Jaekyung;Song, Beom-Seok;Lee, Ju-Woon;Lee, Kwang-Won;Kwon, Jung-Kee;Kim, Tae-Woon;Kim, Jae-Hun
    • Journal of Radiation Industry
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    • v.6 no.2
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    • pp.165-169
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    • 2012
  • This study was conducted to determine the prevention effect of poly-gamma-glutamic acid (${\gamma}-PGA$) on tissue damage induced by gamma irradiation for development of xenograft. Porcine tendons were treated at various doses of ${\gamma}-PGA$ (0.1, 0.5, 1 and 5%) and then gamma-irradiated (30 kGy). Prevention effects on tissue damage were measured as the result of tensile strength, hydroxyproline contents and viscosity of ${\gamma}-PGA$. Tensile strength was remarkably decrease in gamma-irradiated porcine ligament, but increased by ${\gamma}-PGA$ treated one. Among the ${\gamma}-PGA$ treatment doses, 1% treated group showed the highest values of tensile strength compared to non-treated group. Hydroxyproline contents was significantly increased by gamma irradiation, but decreased by the ${\gamma}-PGA$ treatment. Particularly, 1 and 5% ${\gamma}-PGA$ treated group were exhibited lower values of hydroxyproline contents than other group. In the result of viscosity, gamma-irradiated ${\gamma}-PGA$ (1%) was remarkably increased. Base on the results, it demonstrated that gamma irradiation induces severe alteration of mechanical property and collagen contents on porcine ligament, but ${\gamma}-PGA$ can effectively prevent these tissue damage.

Effect of Oxidants on Decomposition of Acetaminophen by Gamma Irradiation (Acetaminophen의 감마선 분해에 대한 산화제 영향)

  • Lee, Myunjoo;Ahn, Young Deok;Lee, Kyoung-hwon;Lee, O Mi;Kim, Tae-Hun;Jung, In-ha;Yu, Seungho
    • Journal of Radiation Industry
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    • v.5 no.4
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    • pp.359-364
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    • 2011
  • This study was aimed to investigate the effect of oxidants on biodegradability and decomposition of acetaminophen (ACT) by gamma ray. Three kinds of chemical, potassium persulfate, hydrogen peroxide and ferrous sulfate were selected as an oxidant. The absorbed dose was ranged from 0.2 to 10 kGy and the concentration of oxidants was from 0.1 to 10 mM and the initial concentration of acetaminophen was $30mg\;l^{-1}$ in this study. The concentration of ACT was gradually decreased corresponding to the increase of the absorbed dose. However, mineralization of ACT was not occurred by the increased of the absorbed dose. When the 10 mM of oxidants applied to the ACT aqueous solution, the concentration of ACT was rapidly decreased according to absorbed dose and the mineralization was observed in potassium persulfate. Biodegradability of ACT with potassium persulfate was higher than that of ACT without potassium persulfate in lower absorbed dose and decreased according to higher absorbed dose.

Effect of Fermented Blackberry Drinks Formed from Radiation-induced Mutant on Liver Repair Capacity in Rats (방사선 유도 돌연변이체 블랙베리로 제조한 발효음료의 간 손상 회복 효과)

  • Cho, Byoung Ok;So, Yangkang;Lee, Chang Wook;Cho, Jung Keun;Woo, Hyun Sim;Jin, Chang Hyun;Jeong, Il Yun
    • Journal of Radiation Industry
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    • v.7 no.1
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    • pp.81-85
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    • 2013
  • This study was conducted to investigate the effect of fermented blackberry drinks (BD) on carbon tetrachloride ($CCl_4$)-induced liver injury in rats. Male Sprague-Dawley rats were randomly divided into four groups with 6 rats per group: control, $CCl_4$, $CCl_4$ plus BD $3ml\;kg^{-1}$, and $CCl_4$ plus BD $6ml\;kg^{-1}$. We found that the levels of serum aspartate aminotransferase (AST) and alanine aminotransferase (ALT) were significantly increased and the activity of antioxidant enzyme glutathione peroxidase (GPx) in the liver was decreased in rats treated with $CCl_4$ alone when compared with the control group. However, the administration of BD attenuated the levels of serum AST and ALT in $CCl_4$-treated rats. Moreover, the administration of BD significantly increased the activity of GPx in $CCl_4$-treated rat livers. Taken together, these results suggest that BD could protect the liver from $CCl_4$-induced hepatic damage.

Development of Mechanically Expanded Gelatin-AAc-PLLA/PLCL Nanofibers for Vascular Tissue Engineering by Radiation-based Techniques (방사선 기반에 의한 기계적으로 공극을 증가시킨 젤라틴이 도입된 혈관조직공학용 PLLA/PLCL 나노섬유 지지체의 개발)

  • Jeong, Jin-Oh;Jeong, Sung In;Seo, Da-Eun;Park, Jong-Seok;Gwon, Hui-Jeong;Ahn, Sung-Jun;Shin, Young Min;Lim, Youn-Mook
    • Journal of Radiation Industry
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    • v.9 no.4
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    • pp.171-180
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    • 2015
  • Vascular tissue engineering has been accessed to mimic the natural composition of the blood vessel containing intima, media, and adventitia layers. We fabricated mechanically expanded PLLA/PLCL nanofibers using electrospinning and UTM. The pore size of the meshes was increased the gelatin immobilized AAc-PLLA/PLCL nanofibers ($203.30{\pm}49.62microns$) than PLLA/PLCL nanofibers ($59.99{\pm}8.66microns$) after mechanical expansion. To increase the cell adhesion and proliferation, we introduced carboxyl group, and gelatin was conjugated on them. The properties of the PLLA/PLCL nanofibers were analyzed with SEM, ATR-FTIR, TBO staining, and water contact angle measurement, general cell responses on the PLLA/PLCL nanofibers such as adhesion, proliferation, and infiltration were also investigated using smooth muscle cell (SMC). During the SMC culture, the initial viability of the cells was significantly increased on the gelatin immobilized AAc-PLLA/PLCL nanofibers, and infiltration of the cells was also enhanced on them. Therefore, gelatin immobilized AAc-PLLA/PLCL nanofibers and mechanically expanded meshes may be a good tool for vascular tissue engineering application.

Preparation and Characterization of Poly(vinyl alcohol) Hydrogel Contain Metronidazole by Irradiation (감마선을 이용한 Metronidazole이 함유된 Poly(vinyl alcohol) 하이드로겔 제조 및 특성)

  • Baik, Jae;Park, Jong-Seok;Jong, Jin-Oh;Jeong, Sung In;Gwon, Hui-Jeong;Ahn, Sung-Jun;Lim, Youn-Mook
    • Journal of Radiation Industry
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    • v.10 no.1
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    • pp.21-27
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    • 2016
  • Periodontitis is disease of damaged gum tissue that is not removed the plaque onto teeth. In case that the symptoms of disease get pain worse, it will have to extract tooth because of tumefy or bleeding at gums so treatment of drug was required to periodontitis. In this study, the hydrogel was prepared by including superior viscous, excellent elastic, and biocompatibility of Poly(vinyl alcohol, PVA) and antimicrobial drug of Metronidazole (MD). The 15 wt% PVA was dissolved in deionized water and then prepared PVA solution was irradiated using gamma-ray at 25 kGy ($10kGy\;hr^{-1}$). In addition, PVA hydrogel was immersed in each 0.1, 0.25 and 0.5 wt% MD solution using stirrer for 24 hr. The result of the gelation, 0.5 wt% MD loaded PVA hydrogel(76%) was lower than PVA hydrogel (88.2%). The swelling ration of 0.5 wt% MD loaded PVA hydrogel (294.8%) was higher than PVA hydrogel (105.2%). The compressive strength and thermal properties of MD loaded PVA hydrogel was gradually lower. The drug release test of 0.5 wt% MD loaded PVA hydrogel (61%) was higher than 0.1 wt% MD loaded PVA hydrogel (12%). Therefore, MD loaded PVA hygrogel may be a promising tool for periodontitis medicine by gamma-ray.

Growth Characteristics and Morphological Variation Analysis of Mutant Lines Derived from Gamma-ray and Chemical Mutagen Treatments in Rubus fructicosus L. (블랙베리(Rubus fructicosus L.) 돌연변이 유전자원의 생육특성과 형태학적 변이 분석)

  • Ryu, Jaihyunk;Kim, Dong Sub;Ha, Bo-Keun;Kim, Jin-Baek;Kim, Sang Hoon;Jeong, Il Yun;Jo, Han-Jik;Kim, Ee-Yup;Kang, Si-Yong
    • Journal of Radiation Industry
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    • v.6 no.3
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    • pp.257-265
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    • 2012
  • This study was carried out to evaluate growth, morphological characteristics, and sugar content among fifty six blackberry (Rubus fructicosus) genotypes derived from gamma-ray treatment (fifty two lines), MNU treatments (three lines), and cross breed R. fructicosus${\times}$R. parvifolius(one line). While 56 genotypes had similar stem diameter with origin variety, the most of mutants showed reduced leaf size. Also, they showed a wide range of variation in fruit size and one hundred fruit weight compared with origin variety. In fruit size and sugar content, two mutant lines showed large fruit sizes and ten mutant lines showed 20% higher sugar content than the original variety. In the correlation analysis, positive relationships were determined between sugar content and stem diameter, fruit length, leaf wide and fruit length/fruit wide ratio. However, leaf length/leaf wide ratio showed a negative correlation with sugar content. The results will be used as fundamental data for Rubus fructicosus breeding program.

Influence of electron irradiation on the structural and optoelectronics properties of ZTZ thin films prepared by magnetron sputtering (마그네트론 스퍼터링법으로 제조된 ZTZ 박막의 구조적 전기광학적 특성에 미치는 전자빔 조사의 영향)

  • Cha, Byung-Chul;Jang, Jin-Kyu;Choi, Jin-Young;Lee, In-Sik;Kim, Dae-Wook;Kim, Yu-Sung;Kim, Daeil
    • Journal of the Korean institute of surface engineering
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    • v.55 no.6
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    • pp.363-367
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    • 2022
  • Transparent ZnO/Ti/ZnO (ZTZ) tri-layered films were prepared with radio frequency (RF) and direct current (DC) magnetron sputtering on the glass substrate. The thickness of the ZnO and Ti films was kept at 50 and 10 nm to consider the effect of the electron irradiation on the crystallization and optoelectrical properties of the films. From the XRD spectra, post-depostion electron irradiated films showed the characteristic peaks of ZnO(002) and Ti(200), respectively. the observed grain size of the ZnO(002) and Ti(200) enlarged up to 18.27 and 12.16 nm at an irradiation condition of 750 eV. In the figure of merit which means an optoelectrical performance of the films, as deposited films show a figure of merit of 2.0×10-5 𝛺-1, while the films electron irradiated at 750 eV show a higher figure of merit of 5.7×10-5 𝛺-1.