• Title/Summary/Keyword: 전기영동도

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A Spot Detection Method in 2D Electrophoresis Images Using Gradients of Spot Boundary (스팟 윤곽의 기울기를 이용한 단백질 2차원 전기영동 영상에서의 스팟 검출 방법)

  • 유혜경;이성환
    • Proceedings of the Korean Information Science Society Conference
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    • 2004.10b
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    • pp.283-285
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    • 2004
  • 단백질 2차원 전기영동은 다양한 단백질 분리 방법 중 가장 널리 쓰이는 방법으로 실험 결과를 촬영한 영상을 분석하여 얻은 단백질 스팟의 위치나 질량, 발현 유무 등을 이용하여 각종 질병의 발생 원인 진행 상태, 생리적인 변화 등에 대해 분석할 수 있다. 실험 영상에 다수의 단백질이 존재하므로 이를 수작업으로 처리할 경우에 많은 시간과 노력이 소요되므로 본 논문에서는 자동화된 단백질 스팟 검출 방법을 제안하였으며 단백질 스팟이 같은 위치에 겹쳐서 나타나는 경우가 많은 단백질 2차원 전기영동 실험 영상의 특성을 고려하여 여러 개의 단백질이 겹쳐진 복잡한 스팟 영역에 대해서 스팟의 형태 정보를 이용하여 스팟의 개수를 추정하고 개별 스팟으로 분리하여 보다 신뢰성 있는 분석이 가능하게 하였다 본 논문에서 제안된 방법의 효용성을 검증하기 위해 기존에 널리 사용되고 있는 상용 소프트웨어와 비교 실험을 수행한 결과 겹친 정도가 60%이상인 경우 기존 방법에 비해 우수한 결과를 보였다.

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Analysis of 2D Electrophoresis For Cancer Classification (암진단을 위한 2차원 단백질 전기영동 젤 해석)

  • 김재민
    • Proceedings of the Korean Institute of Intelligent Systems Conference
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    • 2003.09b
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    • pp.166-169
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    • 2003
  • 유전자에 대한 정보를 획득하는 기술적인 문제가 해결되면서, 질병 진단을 위한 새로운 접근 방법으로 혈액 속에 있는 모든 단백질(proteome)의 구성을 분석하는 프로테오믹스(proteomics)에 대한 연구가 최근 들어 활발하게 진행되고 있다. 본 논문은 암 진단을 위하여 혈액 중의 단백질의 구성을 측정한 2차원 전기영동 (2D electrophoresis) 젤 데이터를 해석하는 새로운 방법을 제시하였다. 우선 측정된 많은 단백질 스팟(spot) 중에서 T-statistics 방법으로 단백질 스팟들을 선택하였다. 선택된 단백질 스팟들로 이루어진 암 환자와 정상인 두 샘플들의 확률 분포를 각 집단에 따로 적용된 PCA 영역에서 계산하였다. 최종적으로 조건부 확률의 차이에 근거한 베이즈 분류(Bayes classification) 이론을 적용하여 암 진단을 하였다.

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Determining an Effective Electrophoretic Gel System for Separation of the Circular and Linear Potato Spindle Tuber Viroid RNA Molecules (환상 및 선상감자 걀쪽바이로이드 RNA분자의 전기영동적 분리를 위한 효과적인 조건에 관한 연구)

  • Lee Jai Youl;Kim Han Jip
    • Korean Journal Plant Pathology
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    • v.3 no.4
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    • pp.239-244
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    • 1987
  • Low molecular weight plant ribonucleic acids including potato spindle tuber viroid(PSTV) RNA were electrophoresed in 0M to 8M urea-gradient polyacrylamide gels. The electrophoresis was carried on in a urea - gradient gel system with 1/40 and 1/10 dilution of TBE buffer at three different temperatures, $17^{\circ}C,\;37^{\circ}C\;and\;57^{\circ}C$. The most effective separation of PSTV - RNA molecules into circular and linear forms was achieved at the highly denaturing temperature of $57^{\circ}C$ and at 1/40 dilution of TBE buffer. The electrophoretic mobility of the denatured circular viroid-RNA molecules is dependent mainly on the concentration of urea. In addition, a low concentration of TBE buffer would increase the separation distance between the circular and linear forms of PSTV-RNA molecules in the denaturing urea-gradient gel system

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Dielectric Interaction of Particle in Electrophoresis (전기 영동에서의 입자간의 전기력에 의한 상호 작용)

  • Lee, Ho-Rim;Kang, Kwan-Hyoung
    • 유체기계공업학회:학술대회논문집
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    • 2006.08a
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    • pp.171-174
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    • 2006
  • When two particles close to each other are in electrophoretic motion, each particle is under the influence of the non-uniform electric field generated by the other particle. Two particles may attract or repel each other due to the dielectric force depending on their positions in the non-uniform electric field. It is shown analytically that two adjusting rigid particles can form an aggregate due to the dielectric interaction. To verify the validity of the theoretical prediction, an experiment is carried out by using a microchannel. In the experiment, AC electric field is used to eliminate cumbersome electroosmotic flow. The experimental result shows that the particles form a chain-like structure, which is typically observed in electro-rheological fluid, due to the dielectric interaction.

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Application of Home-made Capillary Zone Electrophoresis System to the Separation of Organic Molecules (제작된 모세관 전기영동 시스템의 유기물 분석에의 응용)

  • Kong Joo Lee;Gwi Suk Heo
    • Journal of the Korean Chemical Society
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    • v.35 no.3
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    • pp.219-225
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    • 1991
  • Capillary zone electrophoresis (CZE) which is highly efficient separation technique has been domestically established having optimum detection sensitivity. By applying 20∼35 kV of electric potential to the narrow (50 ${\mu}m$ i.d.) capillary tubing filled with running buffer, this technique can quickly (< 20 min) separate the small quantities of sample with high separation efficiency (number of theoretical plates : 200,000∼500,000). Factors affecting the separation efficiency and resolution in CZE were examined by analyzing adenine and catecholamine derivatives.

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Problems and Solutions of Zymography Techniques (자이모그라피 기술의 문제점과 해결)

  • Kang, Dae-Ook;Choi, Nack-Shick
    • Journal of Life Science
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    • v.29 no.12
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    • pp.1408-1414
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    • 2019
  • Enzymes are widely used in industrial applications such as detergents, food, feed production, pharmaceuticals and medical applications and major contributors to clean industrial products and processes. To screen, identify, and characterize the enzymes the zymography techniques are routinely used. The zymography technique is a simple, sensitive, and quantifiable technique that is widely used to detect functional enzymes following electrophoretic separation in sodium dodecyl sulfate (SDS)-polyacrylamide gels. The method is a versatile two-stage technique involving protein separation by electrophoresis followed by the detection of enzyme activity in polyacrylamide gels under non-reducing conditions. It is based on SDS-polyacrylamide gel (PAG) copolymerization with substrates, which are degraded by the hydrolytic enzymes restored in enzyme reaction buffer after the electrophoretic separation. Any kind of biological sample can be applied and analyzed on zymography, including culture supernatants of microbes, plants extracts, blood, tissue culture fluids, enzymes in foods extracts and metaproteome. The advantage of zymography is that it is possible to directly detect the protein with activity on the electrophoretic gel as well as confirm the activity at the nanogram level. Thus, this zymography technology can be applied in various fields. However, these advantages are rather disadvantageous and can often lead to experimental errors. In this review, the advantages, disadvantages, and problem solving of zymography technique are described.

Conifer Fossils from the Lower Cretaceous Youngdong Group and Their Paleoclimatic Implication (하부 백악계 영동층군에서 산출된 구과류 화석과 고기후적 의미)

  • Seo, Ji-Hye;Kim, Jong-Heon
    • Journal of the Korean earth science society
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    • v.30 no.4
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    • pp.444-453
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    • 2009
  • A large number of fossil plants were collected from the Lower Cretaceous Youngdong Group in the Youngdong area of Chungcheongbug-do, Korea. Youngdong flora consists of 5 genera and 6 species, such as Frenelopsis cf. alata, Pseudofrenelopsis cf. parceramosa, P. cf. varians, Brachyphyllum cf. vulgare, Pagiophyllum sp., and Classostrobus sp., including the male and female cones of Pseudofrenelopsis first occurred in the study area. All of them belong to conifers of Cheirolepidiaceae. It is presumed that Youngdong flora might have flourished under the arid subtropical climate during the middle-late Early Cretaceous.

Isozyme Patterns on Esterase, Peroxidase and Amylase in Benincasa hipspida (Thunb) Cogn and Commelina communis L. (동아와 달개비의 전기영동에 의한 Isozyme의 변이)

  • 채규인;최정식;김영두
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.36 no.2
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    • pp.174-176
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    • 1991
  • A electrophoretic study on seveal important enzymes was conducted with seed, leaf and stem of Benincasa hipida (Thunb) Cogn and Commelina communis L. Isozyme patterns of esterase were different from the parts and fruit of wax gourd appeared only one band. In the peroxidase isozyme, fruit of wax gourd appeared four bands, but stem of common dayflower no appeared. In the amylase isozyme, seed and fruit of 'gourd were appeared clearly one band, respectively.

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Surface Morphology of EPD Films with Variable Suspension Solutions of YBCO Superconductor Powder (YBCO 분말의 현탁용매에 따른 EPD전착막의 표면 현상)

  • 소대화;전용우;최성재
    • Proceedings of the Korean Institute of Information and Commucation Sciences Conference
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    • 2004.05b
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    • pp.307-310
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    • 2004
  • 전기영동전착법을 이용한 초전도 후막선재의 제작은 제작 장치와 공정이 간단하고 두께제어 및 다양한 형태의 초전도 막과 선재 제작이 가능한 경제적 효율성과 기술적 장점을 가지고 있다. 따라서 초전도 후막의 특성향상을 위하여 전착공정 과정에서 입자의 치밀성 및 배향성 향상을 위한 칙적화 방안과, 건조 및 열처리 과정에서 발생되는 크랙 및 기공현상과 같은 문제점을 극복 할 수 있는 균일한 후막 표면 화보에 관한 비교 분석 연구를 수행하였다. 전기영동전착법에 의한 초전도후막 제작을 위한 조건 중 현탁용매 조건에 대한 최적화를 구현함으로써 전착 불균일성에 따른 초전도 특성 저하요인인 후막표면의 기공과 크랙현상을 최소화하였다. 전기영동 전착법에 의한 초전도 후막의 특성을 향상시키기 위한 제작 방법으로 각 용매별에 따른 안정화된 제작 조건을 구현하였다.

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Electrophoretic Mobilities of the Potato Spindle Tuber Viroid RNA Molecules in the Urea-Gradient Gels (감자 걀쪽바이로드(PSTV) RNA 분자의 요소농도기울기겔에서 전기영동적 이동성에 관하여)

  • 이재열
    • Korean Journal of Microbiology
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    • v.25 no.1
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    • pp.23-27
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    • 1987
  • Low molecular weight plant ribonucleic acids including viroid-RNA molecules which are soluble in 2M lithium chloride were electrophoresed in the 0M to 8M urea-gradient polyacrylamide gel. Although the linear viroid-RNA molecules migrated at a similarrate across the urea-gradient gel under the denaturing temperature, the circular viroid-RNA molecules moved more rapidly at low urea-gradient region than at high urea-gradient region. Consequently, the migration of the circular viroid-RNA molecules showed a sudden shift across the band of linear forms in the midrange of the urea-gradient gels. Electrophoretic mobilities of the circular viroid-RNA molecules seemed to depend mainly on the concentration of urea in the denaturing urea-gradient gels.

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