• Title/Summary/Keyword: 인공 증식

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Cancer driver gene using multi-omics data and biological network information (멀티 오믹스 데이터 및 생물학적 네트워크 정보를 이용한 드라이버 유전자 분류)

  • Jeong-Ho Park;Kyuri Jo
    • Proceedings of the Korea Information Processing Society Conference
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    • 2023.05a
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    • pp.490-492
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    • 2023
  • 시퀀싱(sequencing) 기술의 발달로 다양한 오믹스(omics) 데이터의 축적과 인공 지능 기술의 발달로 인하여 다양한 드라이버 유전자 분류기법이 제안되어왔다. 최근에는 암 데이터가 대용량으로 축적되며 기계 학습 기반의 다양한 기법들이 활발히 제안되었다. 특히 다양한 오믹스 데이터를 결합한 고차원 데이터에서 높은 정확도를 확보하기 위한 시도가 활발히 이루어지고 있다. 본 논문에서는 멀티 오믹스와 네트워크 관련 특징을 기반으로 암의 증식 및 발생에 중요한 역할을 하는 드라이버 유전자를 분류하는 딥러닝 모델을 제시한다. 또한 The Cancer Genome Atlas(TCGA) 데이터를 통해서 모델 학습 후 기존 통계 및 머신러닝 기반 기법과 비교하여 성능이 개선되었음을 확인하였다.

Generalized wheat head Detection Model Based on CutMix Algorithm (CutMix 알고리즘 기반의 일반화된 밀 머리 검출 모델)

  • Juwon Yeo;Wonjun Park
    • Proceedings of the Korean Society of Computer Information Conference
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    • 2024.01a
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    • pp.73-75
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    • 2024
  • 본 논문에서는 밀 수확량을 증가시키기 위한 일반화된 검출 모델을 제안한다. 일반화 성능을 높이기 위해 CutMix 알고리즘으로 데이터를 증식시켰고, 라벨링 되지 않은 데이터를 최대한 활용하기 위해 Fast R-CNN 기반 Pseudo labeling을 사용하였다. 학습의 정확성과 효율성을 높이기 위해 사전에 훈련된 EfficientDet 모델로 학습하였으며, OOF를 이용하여 검증하였다. 최신 객체 검출 모델과 IoU(Intersection over Union)를 이용한 성능 평가 결과, 제안된 모델이 가장 높은 성능을 보이는 것을 확인하였다.

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Study on the growth and control of algae using effluent of sewage treatment facility (하수처리장 방류수 재이용에 따른 조류 생장 및 제어방안 연구)

  • Park, Soo young;Kim, Jin Han;Park, Jung Hwan;Ahn, Kyung Soo
    • Journal of Wetlands Research
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    • v.7 no.3
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    • pp.67-73
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    • 2005
  • At research, the river's water which the sewage treatment facility will ask growth suppression the algae in the artificial rivers which it is using or it researched the method for the removal of the algae which grew. At results, when 60ppm of Chlorine was put in, the possibility of getting the result where 90% chlorophyll-a was removed and LC50 was 0.8ppm. The algae did not create even after 20days by which uses prevent agent of creation of the algae. Controlling the chlorine almost there was not an extinction effect of the algae which was already in large quantities multiplied, with in the effect against an water ecosystem widely known it is not. The prevent agent could inhibit creation of the algae, but it was judged with the fact that the methods are directly applied to the field must be researched continuously.

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Artificial Multiplication of the Black Soldier Fly(BSF), Hermetia illucens(Diptera: Stratmyidae) Using the Livestock Feces (가축분뇨를 이용한 동애등에 증식기술 개발)

  • Choi, Young-Cheol;Lee, Sang-Beom;Park, Kwan-Ho;Nam, Sung-Hee;Kim, Jong-Gill;Kim, Won-Tae;Choi, Ji-Young
    • Journal of Sericultural and Entomological Science
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    • v.50 no.2
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    • pp.63-70
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    • 2012
  • This study was conducted to investigated the distribution, ecological character and life cycle of Black Soldier Fly(BSF), Hermetia illucens, to determine effects of BSF on composing ability to the livestock feces. The distribution of BSF was defined in all parts of the country in Korea. Its main habitat was found to be areas near cattle sheds, feces sheds, living waste dump grounds, and food waste dump grounds. Excellent species of the bio-conversion using the livestock feces were selected out of two kinds of solider flies(Hermetia illucens and Ptecticus tenebrifer). And effects of BSF on composing ability to the livestock feces were pig feces 0.5 g, cattle feces 0.43 g and chicken feces 0.3 g per a larvae of BSF. In the examination of the ability of BSF to decompose food waste, volume of the livestock feces decreased by weight pig feces 77, cattle feces 83.62 and chicken feces 80%. Observed characteristics of BSF larvae and pupae stage were by developmental stage may be summarized as follows: size and length of larvae and pupae of BSF were higher than in pig feces and mixed sawdust treatments. In order to develop artificial indoor rearing techniques, The pupation and emergence rate were not visible the difference but important factor of the mating and egg-laying was a sun light. And it was visible the difference in mating ratio. Mating rate of H. illucens by seasonal change was the highest from May to July. Mating mostly occurred between 10 : 00 and 12 : 00 during which light intensity is high. As the egg-laying medium for artificial egg collection, calf feed and food waste were most effective. The ratio of egg-laying medium is waste food : sawdust(1 : 1) in volume. For egg-laying materials, flower foam and wood with holes were used; holes sized 3 ~ 5 mm in diameter, 7 ~ 10 mm in depth were most preferred for egg-laying.

Micropropagation of Juvenile and mature Trees of Sawtooth Oak (Quercus acutissima C.) (상수리나무 유목(幼木)과 성숙목(成熟木)의 기내번식(器內繁殖))

  • Moon, Heung Kyu;Youn, Yang;Yi, Jae Seon
    • Journal of Korean Society of Forest Science
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    • v.86 no.3
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    • pp.391-398
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    • 1997
  • Present study describes a method on the application of efficient tissue culture systems for the micro-propagation of juvenile and mature sawtooth oak(Quercus acutissima). Nodal segments with axillary buds were used as initial explant sources. WPM(Woody Plant Medium) was the best in growth and proliferation of shoot among the media tested. Although the single effect of zeatin revealed on two dorminant shoot elongation with normal growth until the elevation of levels up to 3.0mg/l, BAP($N^6$-benzyl amino purine) usually showed better response than zeatin on shoot multiplication and/or elongation. In addition, the incorporation of BAP and zeatin onto the culture media represents more effectiveness in shoot proliferation and its growth. Optimum concentrations of BAP and zeatin were 0.5 and 0.05~1.0mg/l, respectively. Ninety percent of the proliferated shoots was rooted on half-strength GD (Gresshoff and Doy, 1972) medium containing 0.5mg/l IBA(indole butyric acid) in 4 weeks after culture. More than 70% of the rooted plantlets survived after 5 months of transplanting into artificial soil mix containing equal amount of peatmoss and perlite. Among 27 plus tree clones which were grafted twice onto the juvenile rootstocks, only 4 clones revealed the possibility for shoot multiplication through tissue culture system. The capacity for the micropropagation using mature explant sources was highly depended on clonal differences compared with those of octet age. More than 90% of rooting ratio was obtained from the best responding clone. Among the 7 rooting media tested, GD medium was the best far rooting. The most effective rooting was obtained on half-strength GD medium containing 0.2 to 2.0mg/l IBA. More than 60% of rooted plantlets survived after 5 months of transplanting into the artificial soil mix.

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Culture Conditions Affecting Spore Germination, Prothallus Propagation and Sporophyte Formation of Dryopteris nipponensis Koidz. (참지네고사리의 포자발아, 전엽체 및 포자체 번식에 영향을 미치는 배양 조건)

  • Jang, Bo Kook;Cho, Ju Sung;Lee, Ki Cheol;Lee, Cheol Hee
    • Horticultural Science & Technology
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    • v.35 no.4
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    • pp.480-489
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    • 2017
  • We investigated a suitable method for in vitro germination of spores, propagation of prothalli, and the formation of sporophytes in the fern Dryopteris nipponensis Koidz. Spore germination rate was relatively high regardless of culture medium. Prothallus development was faster in Knop medium than in Murashige and Skoog (MS) media. Prothalli used in all experiments were obtained from germinated spores, and were cultivated in different concentrations of media components. The active formation of sexual organs such as antheridium made 1MS medium suitable for prothallus propagation, although there was a lower propagation ratio compared to Knop medium. Growth and morphogenesis of prothalli were most effective on 1MS medium containing 2% sucrose, and 60 mM of total nitrogen source with 20:40 mM ratio of $NH_4{^+}:NO_3{^-}$. To select a suitable soil composition for sporophyte formation, ground prothalli were cultivated on single and mixed soils using bed soil, peat moss, perlite, and decomposed granite for 14 weeks. Bed soil promoted sporophyte formation and growth regardless of single or mixed use. In particular, a mixture of bed soil and decomposed granite in a 2:1 ratio (v:v) led to accelerated sporophyte formation ($0.83/cm^2$).

Micropropagation of an Endangered Species, Stellera rosea Nakai by Tissue Culture (멸종위기식물 피뿌리풀의 기내증식)

  • Han, Mu-Seok;Moon, Heung-Kyu;Kang, Young-Jae;Kim, Won-Woo;Kang, Byung-Seo;Byun, Kwang-Ok
    • Journal of Plant Biotechnology
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    • v.31 no.1
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    • pp.31-35
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    • 2004
  • In order to develop an efficient micropropagation technique for an endangered species, Stellera rosea N., stem node cultures were conducted on MS medium supplemented with cytokinins. Generally, BA was better than zeatin on shoot proliferation from stem nodes, whereas zeatin showed more effective on shoot elongation. In vitro rooting of shoots was achieved by application of an auxin pre-culturing method. Overall rooting rate was relatively low and differed depending on the culture period. Pre-culturing of shoots for 15 days at 1.0mg/L IBA revealed a slightly better rooting efficiency reaching 30% rooting rate than NAA. Root induction rate by NAA also varied with concentration of NAA and culture periods. Total 51% of the rooted plantlets survived on artificial soil mixture and grew normally without any distinct morphological variation. The results suggest that the endangered Stetllera plants are propagated via in vitro culture system, but still need to more study for the improvement of rooting and acclimatization of the plantlets in soil.

Optimal Cultural Conditions for Prothallus Propagation and Sporophyte Formation of Cornopteris crenulatoserrulata (Makino) Nakai (응달고사리 전엽체 증식 및 포자체 형성을 위한 최적의 배양조건)

  • Yeon, Soo Ho;Jang, Bo Kook;Lee, Ki Cheol;Lee, Cheol Hee
    • Proceedings of the Plant Resources Society of Korea Conference
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    • 2018.04a
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    • pp.24-24
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    • 2018
  • 본 연구는 응달고사리[Cornopteris crenulatoserrulata (Makino) Nakai]의 전엽체 대량증식 및 포자체 형성을 위한 배지구성물질 및 배양토의 최적조건을 구명하고자 수행되었다. 실험재료는 기내에서 포자발아를 통해 획득한 전엽체를 계대배양하여 실험에 사용하였다. 배지구성물질이 전엽체의 증식 및 형태 형성에 미치는 영향을 알아보고자, 배지구성물질의 농도를 1/4, 1/2, 1배로 조절한 MS배지와 Knop배지를 조성하였다. 기내 배양된 전엽체 300mg을 메스로 다진 후 상기 5종의 배지에 배양하였다. 실험의 결과, 전엽체의 생체중은 Knop배지에서 3.93g으로 가장 많이 증가되었으며, 현미경으로 관찰한 결과 기관형성도 정상적으로 이루어졌다. 선행연구에서 선발된 Knop배지를 기준으로 sucrose(0, 0.5, 1.0, 2.0 및 3.0%) 및 활성탄(0, 0.1, 0.2 및 0.4%)의 농도를 달리 첨가하여 전엽체에 미치는 영향을 확인하였다. 실험결과, 0.5%의 sucrose를 첨가한 배지에서 생체중이 5.90g으로 증가하였으며, 활성탄은 첨가하지 않는 것이 효과적이었다. 포자체 형성을 위한 최적의 토양조건을 구명하고자, 원예상토와 피트모스, 펄라이트, 마사토 등 인공토양의 비율을 달리하여 8종류의 토양을 사각분에 충진하였으며, 기내에서 배양된 전엽체를 10초간 분쇄한 후 사각분에 1g씩 균일하게 분주하여 16주간 배양하였다. 배양결과, 원예상토를 단용으로 처리한 실험구에서 포자체가 171.5개로 가장 많이 발생하였으며, 원예상토와 마사토를 2:1(v:v)로 혼합한 토양에서 125.0개, 원예상토, 피트모스, 마사토를 1:1:1(v:v:v)로 혼합한 토양에서 113.3개 순으로 포자체가 발생하였다. 포자체의 생육은 포자체의 형성이 가장 많았던 원예상토를 단용한 토양에 비해 원예상토와 마사토를 2:1(v:v)로 혼합한 토양에서 생체중, 엽장, 엽폭, 근장 등이 우수하였다. 한편 피트모스가 혼합된 토양에서는 전엽체와 포자체 형성이 억제되는 경향을 보였다. 위 결과로 보아 응달고사리의 전엽체 기내배양에는 sucrose 0.5%가 첨가된 Knop배지가 적합하며, 포자체 대량생산을 위해서는 원예상토를 단용한 토양을 사용하는 것이 좋다고 판단되었다.

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THE EFFECT OF LEUCONOSTOC LACTIS 51 AGAINST THE PLAQUE FORMATION OF STREPTOCOCCUS MUTANS (Streptococcus mutans의 치태형성에 대한 Leuconostoc lactis 51의 영향)

  • Kim, Tae-Geun;Yang, Kyu-Ho;Oh, Jong-Suk
    • Journal of the korean academy of Pediatric Dentistry
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    • v.27 no.4
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    • pp.549-557
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    • 2000
  • Dental caries is a bacterial disease of the dental hard tisssus, characterized by a localized, progressive, molecular disintegration of tooth structure. The action of Leuconostoc lactis 51 about plaque formation and replication by Streptococcus mutans was studied as follows. 1. Lower amount of plaque was produced at the mixed culture of S. mutans and L. lactis 51 than S. mutans alone on the wires in the beaker. 2. Fewer cells of S. mutans were replicated at the mixed culture of S. mutans and L. lactis 51 than S. mutans alone. 3. In M17Y broth, viable cells of S. mutans and L. lactis 51 increased for 12 hours, and decreased for 24 hours. In M17YS broth, viable cells of S. mutans showed time-dependent decrease at mixed culture of S. mutans and L. lactis 51. 4. The culture supernatant of L. lactis 51 didn't inhibit the replication of S. mutans and the formation of artificial plaque. 5. Sucrose and frutose were extracted from the culture supernatant of L. lactis 51 in M17YS broth. These results suggest that L. lactis 51 isolated from the oral cavity inhibits the replication of S. mutans and the formation of artificial plaque.

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Distribution of Bursaphelenchus xylophilus in Naturally Infected Pinus densiflora and P. koraiensis and Migration of B. xylophilus in Artificially Inoculated P. densiflora Seedlings (자연감염된 소나무와 잣나무 내 소나무재선충 분포 및 인공접종한 소나무 묘목 내에서의 소나무재선충 이동)

  • Kim, Jae-Geun;Kim, Byung-Kwan;Lee, Seung-Kyu;Kim, Jin-Cheol;Han, Sang-Sub;Cha, Byeong-Jin
    • Research in Plant Disease
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    • v.18 no.2
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    • pp.101-108
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    • 2012
  • In 2006, pinewood nematode, Bursaphelenchus xylophilus, was isolated from about 50 years old trees of Pinus densiflora and P. koraiensis showing leaf-wilt and -drying symptoms in Gwangju, Gyeonggi-do and Chuncheon, Gangwon-do. Isolation of pinewood nematodes from sapwood of infected pine trees showed no difference in population density between tree species and among the sampling heights on the main stem. Migration of pinewood nematodes in the host tree were investigated by inoculation of red pine (P. densiflora, 3 years old) seedlings with B. xylophilus. The nematodes seemed to move in red pine seedlings prior to multiplication and it might have taken about 20 days to start multiplication and expression of symptoms including wilt and dieback. In initial time after inoculation, nematodes started migration through the cortical resin canal from inoculated site and further showed upward and downward movements. More nematodes were observed in cortical resin canal during early period of inoculation and later in resin canal of xylem and tracheid also while, the pith still remained free from nematode. The density of B. xylophilus was higher in seedlings of low-vigor with poor root growth than in seedlings of normal root growth. Seedlings showing high density of B. xylophilus exhibited stem discoloration and secondary infection by fungus at the inoculation site.