• Title/Summary/Keyword: 유전적거리

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Genetic Diversity and Relationship by SSR Markers of Korean Soybean Cultivars (한국 콩 육성품종의 SSR마커에 의한 유전적 다양성과 유연관계)

  • Kim Seong-Hun;Jung Jong-Wook;Moon Jung-Kyung;Woo Sun-Hee;Cho Yong-Gu;Jong Seung-Keun;Kim Hong-Sig
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.51 no.3
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    • pp.248-258
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    • 2006
  • Genetic diversity of 91 Korean soybean cultivars was assessed with 20 simple sequence repeat (SSR). Twenty SSR loci generated a total of 149 alleles. The number of alleles for each SSR locus ranged from 3 to 15 with a mean of 7.5 alleles. Genetic diversity estimated by PIC value of 91 cultivars was ranged from 0.424 to 0.905 with an average of 0.711. Cluster analysis based on Nei's genetic distances classified 91 soybean cultivars except Geomjeongkong 4 into 7 groups. The majority groups were I, IV, and VI which included 26, 24, and 18 cultivars, respectively. Obvious differences in genetic diversity appeared to be related with the released periods of cultivars and utilization type of cultivars, but not with breeding sites. Cultivars released in 1970's and in 1990's showed the lowest and the highest genetic diversities with 0.576 and 0.706, respectively. Soybean cultivars for vegetable and early maturity showed the lowest genetic diversity with 0.514, while those for soy sauce and tofu showed the highest genetic diversity with 0.691. Genetic distance between soybean cultivar groups developed before 1969 and during 1970's was the nearest, while genetic distance between those developed in 1970's and 1990's was the furthest. Cultivar group for vegetable and early maturity showed the furthest genetic distance with cultivar group for soy sauce and tofu, while it showed the nearest genetic distance with cultivar group for cooking with rice. Genetic distance was greater between soybean cultivar groups developed in Suwon and Iksan than between those developed in Milyang and Iksan.

Varietal Classification by Multivariate Analysis in Job′s Tears (Coix lachryma-jobi L. var. mayuen STAPF) (다변량 해석법에 의한 율무의 품종군 분류)

  • 권병선;박희진
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.35 no.2
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    • pp.126-131
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    • 1990
  • Sixty two Job's Tear cultivars were largely classified into ten varietal groups and every varieties. except for Group V forming the Group by one variety. uniformly formed the Groups. From Group I to Group Ⅹ respectively contained three(5%), eighteen(29%), five(8%), thirteen(21%), one(2%), five(8%), seven(11%), four(7%), two(3%) and four(7%) varieties. Group II and Group IV showed considerably large variation whereas Group Ⅷ, IV and Ⅹ showed low variation and inferiority in vigorosity and yield components. Most of the varietal Group were not associated with their geographical origin. Days to flowering and plant height among the nine characters were the largest contributors to the D$^2$ in both inter- and inter groups.

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A Systematic Relationship of the Korean Symplocaceae Based on RAPD analysis (RAPD에 의한 한국산 노린재나무과 식물의 유연관계 분석)

  • Park, Sang-Hong;Lee, Joongku;Kim, Joo-Hwan
    • Korean Journal of Plant Taxonomy
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    • v.37 no.3
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    • pp.225-237
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    • 2007
  • In order to estimate the genetic relationships among four taxa of Korean Symplocaceae and their regional populations, RAPDs analysis was performed. The length of the amplified DNA fragments ranged from 150 to 1,900 bp. Ninety-two RAPD bands were scored for 11 primers and the genetic distance was calculated with by Nei-Li's genetic dissimilarity. Deciduous and evergreen groups were clearly separated in the UPGMA analysis. Symplocos coreana was clustered as a distinct group, and S. sawafutagi and S. tanakana were also clustered at specific level, respectively. The RAPD data was useful to cognize the genetic variation and to discuss the relationships among Korean Symplocaceae

Sequence Diversity of Mitochondrial Cytochrome b Gene in Grey Goral Naemorhedus caudatus(Artiodactyla, Bovidae) from Korea (한국의 산양(우제목, 소과)의 미토콘드리아 Cytochrome b 염기서열 다양성)

  • Koh, Hung-Sun;Yang, Byong-Guk;Lee, Bae-Kun;Lee, Jong-Hyong
    • Animal Systematics, Evolution and Diversity
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    • v.18 no.1
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    • pp.13-21
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    • 2002
  • To add genetic information to the conservation efforts on grey coral (Naemorhedus caudatus) in Korea, we investigated the pattern of mitochondrial cytochrome b gene sequence (606 bp) of six specimens from two localities in Korea. The corresponding sequences of N. caudatus in China obtained from GenBank were also used. The nucleotide Tamura-Nei distances between each of four haplotypes of N. caudatus in Korea and the haplotype of N. caudatus in China varied from 0.0650 to 0.0803: N. caudatus revealed high level of sequence diversity in Bovidae. In N. caudatus in Korea, the distances among three haplotypes at Yanggu were 0.0151 to 0.0185, and it suggests that the genetic diversity of Yanggu population was decreased in low level. Moreover, the distances between each of three haplotypes at Yanggu and one haplotype at Samcheok were 0.0343 to 0.0489. It indicates that habitat isolation caused the continuous increase of genetic distance with geographic distance in N. caudatus, and various conservation plans for mitigating the loss of genetic diversity in Korea have to be in immediate action. To clarify the taxonomic status of N. caudatus, the sequence (276 bp) of N. goral available from GenBank were also utilized, and n goral was not distinct from N. caudatus. It suggests that they may be conspecific, but further analyses with additional specimens of two species are necessary.

Design of Planar Microstrip Antenna at UHF ISM band for the Safety Communication of Life at Sea (해상인명 구조통신을 위한 UHF ISM 대역 평판형 마이크로스트립 안테나 설계)

  • Lee, In-Gon;Hong, Ic-Pyo
    • Journal of IKEEE
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    • v.16 no.1
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    • pp.62-68
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    • 2012
  • The planar microstrip antenna for the safety communication of life at sea is designed and manufactured to effectively receive the emergency wireless signal from the transmitter on the life vest. The proposed microstrip antenna in this paper is easy to make, light weight and cheap compared to other antennas because of printed antenna fabrication. To overcome the narrow bandwidth, large size and low gain characteristics of microstrip antenna, we use the IDMA(Identical Dual Patch Microstrip Antenna with Air-Gap) structure. The proposed antenna was fabricated with the use of 1.6mm FR4 and measured with the 28.7MHz(6.6%) of bandwidth and 3.04dBi of gain at the frequency of 426MHz. To validate the proposed antenna, we experimented the possible distance range at sea using the commercial UHF transceiver module and obtained over 5km distance for stable communication. This antenna can be widely applied to application of the UHF wireless mobile communication.

A GA-Based Algorithm for Generating a Train Speed Profile Optimizing Energy Efficiency (에너지 최적의 열차 속도 궤적 생성을 위한 GA 기반 알고리즘)

  • Kang, Moon-Ho;Han, Moon-Seob
    • Journal of the Korean Society for Railway
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    • v.12 no.6
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    • pp.878-886
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    • 2009
  • This paper proposes an optimal algorithm for generating a train speed profile giving optimal energy efficiency based on GA (Genetic Algorithm) and shows its effectiveness with simulations. After simplifying the train operation mode to a maximum traction, a coasting and a maximum breaking, adjusting the coasting point to minimize the train consuming energy is the basic scheme. Satisfying the two constraints, running distance and running time between two stations, a coasting point is determined by GA with a fitness function consisting of a target running time. Simulation results have shown that multiple coasting points could exist satisfying both of the two constraints. After figuring out consumed energies according to the multiple coasting points, an optimal train speed profile with a coasting point giving the smallest consumed energy has been selected. Simulation blocks for the train performance simulation and GA have been designed with the Simulink.

Diversity of Mitochondrial DNA cytochrome b Gene in Two Subspecies of Striped Field Mouse, Apodemus asrarius coreae Thomas and A. asrarius manchuricus Thomas (Mammalia, Rodentia) from Korea and Northeast China (한국과 북동 중국에 서식하는 등줄쥐 2아종, Apodemus agrarius coreae Thomas and A. agirarius manchuricus Thomas (포유강, 설치목)의 미토콘드리아 DNA cytochrome b 유전자의 다양성)

  • Koh, Hung-Sun;Jinxing Wang;Lee, Bae-Kun;Heo, Seon-Wook
    • Animal Systematics, Evolution and Diversity
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    • v.17 no.1
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    • pp.49-57
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    • 2001
  • The partial sequences of mtDNA cytochrome b gene in two subspecies of striped field mouse(Apodemus agrarius coreae and A. agrarius manchuricus) from Korea and northeast China were analyzed to determine the degree of genetic diversity in ech subspecies and to confirm their subspecific difference. In 18 specimens of A. agrarius coreae, ten haplotypes were resulted, and in two specimens of A. agrarius manchuricus. one haplotype was revealed. Tamura-Nei nucleotide distance among ten haplotypes in subspecies coreae ranged 0.36 to 1.86%. and nucleotide distance between two subspecies (coreae and manchuricus) was 0.37 to 1.47%: maximum infrasubspecific divergence in coreae was greater than maximum intersubspecific difference between two subspecies. Moreover, no major subgroup was resulted when 11 haplotypes in two subspecies were compared. Our sequence result was not cancordant with the morphological data studied so far, and it is concluded that cytochrome b gene sequence is not a good genetic marker to distinguish two subspecies of A. agrarius. In futurem, mtDNA control region analyses seemded to be necessary to reveal genetic relationship between these two subspecies of A. agrarius.

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Numerical Optimization of Foundation place for Domestic Offshore Wind Turbine by using Statistical Models for Wind Data Analysis (기상풍황자료 통계적 분석을 통한 한국형 해상풍력터빈 설치지점 선정 최적화 연구)

  • Lee, Ki-Hak;Jun, Sang-Ook;Ku, Yo-Cheon;Pak, Kyung-Hyun;Lee, Dong-Ho
    • 한국신재생에너지학회:학술대회논문집
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    • 2007.06a
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    • pp.404-408
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    • 2007
  • 현재 국내에서 운용중인 풍력발전시스템은 국내 풍력자원에 대한 정확한 정보의 부재와 국내 풍황에 맞지 않는 국외 모델을 그대로 운용하는 등의 몇 가지 문제를 드러내었다. 본 연구의 목적은 국내 연안의 해상에서 한국형 해상풍력터빈을 설치하기 위한 잠재적 최적위치와 풍황자료 산출 최적화 알고리즘을 구현하는 것이다. 최적화 알고리즘은 얕은 수심 분포와 연안에서의 거리를 제약조건으로 하고 최대 에너지밀도를 가진 지점을 구하는 것으로 정식화하였다. 풍황자료 산출을 위해서 국내 연안의 해상 풍황자료를 포함하는 기상풍황자료를 통계적 모델로 분석하여 바람지도를 작성하였다. 이 바람지도를 이용하여 지질 통계학 분야의 관측기법인 크리깅 모델을 구성하고, 전역최적화기법인 유전자알고리즘을 이용하여 제약조건을 만족하는 최대에너지밀도값과 그 위치를 도출하였다. 수치최적화 결과 우리나라 풍력 자원의 대략적인 잠재량과 현황파악이 가능하였고, 해상풍력발전단지가 조성 가능한 개략적인 위치를 예측할 수 있었다.

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Relationship with botanical characteristics and RAPD analysis of maize inbred lines with tillers (분얼형 옥수수의 식물학적 특성과 RAPD 분석에 의한 근연관계)

  • Kim, Chol-Min;Lee, Hee-Bong;Choi, Hyun-Gu;Jung, Jae-Young;Kim, Gi-Hoon
    • Korean Journal of Agricultural Science
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    • v.28 no.1
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    • pp.8-17
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    • 2001
  • This study was carried out to obtain a basic intonation for the development of a new com hybird with tillers. Materials used in this study were 20 lines having three to four tillers per plant including the PI213749 U.S. line with non-tillers. These 20 lines were compared for the botanical characteristics and genetic distances were measured using RAPD analysis. Flowering date of the K15 was very earlier, while the K07 was very late in flowering date. Stem height and ear height were similar except for K04 and the K15. K06, K13 and K19 lines were appeared to be resistant to lodging due to decreased ear height. Number of tillers per plant of lines used were shown three to five on average. K09 showed the highest kernel yield, while the K08 was low. Among characteristics measured tiller per plant and flowering dates, and silking dates showed a positive correlation, while 100 kernels weight, flowering date and ear height were shown a negative with tillers per plant. A total of 17 bands by RAPD analysis using four per primer were appeared and these lines were classified into three groups, especially the third group could be classified into of four sub-groups.

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Phylogeographic and population genetic study of a Korean endemic freshwater fish species, Zacco koreanus (한국 고유 담수어종 참갈겨니(Zacco koreanus) 개체군의 계통지리학 및 집단유전학 연구)

  • Kim, Yu Rim;Jang, Ji Eun;Choi, Hee-kyu;Lee, Hyuk Je
    • Korean Journal of Environmental Biology
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    • v.38 no.4
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    • pp.650-657
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    • 2020
  • We conducted a phylogeographic analysis of Korean endemic Zacco koreanus populations inhabiting the East-flowing river (Gangneung Yeongokcheon; GY, Yangyang Namdaecheon; YN), the Han River (Seomgang; SG, Soksacheon; SS), and the Nakdong River(Gilancheon; GA) using the mitochondrial DNA cytochrome oxidase I (COI) gene (619 bp). Population genetic analysis was further performed to assess the population connectivity for the GY river where there is a large number of human-made artificial weirs with several fishways. The phylogeographic analysis revealed that while the populations of the East-flowing river and those of the Han River formed a monophyletic lineage, the Nakdong River individuals represented a distinct lineage with 3.7-4.2% (mean=4.0%) genetic distance from the other lineages. The population genetic analysis of the GY showed that a mid-stream population harbored relatively higher mitochondrial diversity relative to up- and down-stream populations, and there was no genetic differentiation between these three populations. The latter findings might suggest high genetic connectivity between the populations via genetic flow along the fishways. However, an analysis using faster-evolving genetic markers, such as microsatellites, is needed to confirm the findings of high population connectivity. Our study suggests the possibility of the presence of cryptic species in Z. koreanus in the Nakdong River basin. However, further study with more individual samples as well as additional markers or even more advanced genomic tools is required to test our hypothesis. Ecological or phenotypic analyses should be conducted to test whether the observed Nakdong River lineage represents a different or cryptic species, or simply hidden, but excessive, intraspecific diversity.