• Journal of Plant Biotechnology
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• v.37 no.1
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• pp.12-24
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• 2010

Plant metabolomics is a research field for identifying all of the metabolites found in a certain plant cell, tissue, organ, or whole plant in a given time and conditions and for studying changes in metabolic profiling as time goes or conditions change. Metabolomics is one of the most recently developed omics for holistic approach to biology and is a kind of systems biology. Metabolomics or metabolite fingerprinting techniques usually involves collecting spectra of crude solvent extracts without purification and separation of pure compounds or not in standardized conditions. Therefore, that requires a high degree of reproducibility, which can be achieved by using a standardized method for sample preparation and data acquisition and analysis. In plant biology, metabolomics is applied for various research fields including rapid discrimination between plant species, cultivar and GM plants, metabolic evaluation of commercial food stocks and medicinal herbs, understanding various physiological, stress responses, and determination of gene functions. Recently, plant metabolomics is applied for characterization of gene function often in combination with transcriptomics by analyzing tagged mutants of the model plants of Arabidopsis and rice. The use of plant metabolomics combined by transcriptomics in functional genomics will be the challenge for the coming year. This review paper attempted to introduce current status and prospects of plant metabolomics research.

• Journal of Plant Biotechnology
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• v.33 no.3
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• pp.161-169
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• 2006

Plant metabolomics is a plant biology field for identifying all of the metabolites found in a certain plant cell, tissue, organ, or whole plant in a given time and conditions and for studying changes in metabolic profiling as time goes or conditions change. Metabolomics is one of the most recently developed omics for holistic approach to biology and is a kind of systems biology. For holistic approach, metabolomics frequently uses chemometrics or multivariate statistical analysis of metabolic profillings. In plant biology, metabolomics is useful to determine functions of genes often in combination with DHA microarrays by analyzing tagged mutants of the model plants Arabidopsis and rice. This review paper attempted to introduce basic concepts of metabolomics and practical uses of multivariate statistical analysis of metabolic profiling obtained by $^1$H HMR and Fourier transform infrared spectrometry.

• Journal of Plant Biology
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• v.37 no.2
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• pp.223-229
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• 1994

장미(Rosa sp. cv. Paul's Scarlet)와 밀(Triticum aestivum L.)의 조직 배양체에서 polychlorinated biphenyl(PCB)의 대사를 조사하였다. 조사된 PCB는 2개에서 6개까지의 치환 염소를 보유한 19종류였다. PCB를 투여하여 96시간 동안 배양시킨 결과 장미에서는 9종, 밀에서는 5종류가 30% 이상의 대사율을 나타내었다. 대사율이 높은 PCB들은 모두 2번 위치에 치환 염소를 갖는다는 공통점이 있으며, 대사율이 낮은 PCB일수록 평면적 구조를 갖는 것으로 나타났다. 한편 밀의 배양세포는 para- 위치에 치환 염소를 갖는 PCB에 대한 대사 활성이 전혀 없었다. 두 종의 배양 세포 모두에서 phenobarbital을 처리한 경우 non-p-chlorinated biphenyl의 대사율만이 증가하였으며, parachlorinated biphenyl의 대사 활성은 phenobarbital 처리에 영향을 받지 않았다. 또한 phenobarbital의 처리에 의하여 cinnamate-4-hydroxylase의 활성이 140% 이상 증가하였다. 이상의 결과는 식물체에서의 PCB 대사가 그 구조에 의해 결정될 수 있으며, 특히 para- 위치의 치환 염소를 보유한 종류와 그렇지 않은 종류는 별개의 cytochrome p450의 동위 효소에 의하여 대사될 수 있음을 보여주고 있다.

• Proceedings of the Plant Resources Society of Korea Conference
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• 2018.04a
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• pp.98-98
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• 2018

Glycyrrhizin은 감초의 주성분으로 많은 생리활성을 나타내는 성분이다. 감초를 복용하게 되면, 글리시리진은 장내에 서식하고 있는 장내세균에 의해 glycyrrhetic acid로 대사된다. 하지만, 지금까지 대사반응에 관여하고 있는 균주가 분리 후 자원화되지 않았다. 본 연구를 통해 사람의 대변으로부터 glycyrrhizin을 대사하는 균주로 분리된 strain GLY의 16S rRNA 유전자를 분석한 결과, Enterococcus faecium과 99%의 상동성을 보여, Enterococcus faecium GLY (Genebank No. MH048988)로 명명하였다. 대사활성의 특성을 검토하기 위하여 time course, 기질의 농도에 따른 대사활성의 변화, 근연 균주와 대사활성 비교를 실시하였다. Time course 실험에서 GLY균주가 증식함에 따라 기질인 glycyrrhizin은 줄어들고, 대사산물인 glycyrrhetic acid는 새로 생성되었다. 또한, 기질의 농도에 따른 대사활성의 차이 검토를 위해 여러 농도를 처리하여 배양하였을 때, 1.0mM을 처리한 샘플에서 최대값의 대사물 농도를 보였다. Enterococcus faecium와의 근연균주를 이용하여 glycyrrhizin 대사활성을 측정한 결과, strain GLY 균주가 가장 큰 대사능을 가지고 있었다. 본 연구는 앞으로 glycyrrhizin 생체이용 및 대사 연구를 위한 기초연구가 될 것이며, 장내세균에 의한 생약성분의 대사를 이해하는데 도움이 될 수 있다.

• Korean Journal of Weed Science
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• v.14 no.2
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• pp.107-111
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• 1994

Selective action of root-treated oxyfluorfen [(2-chloro-4-thrifluoromethylphenyl)-3'-ethoxy-4'-nitrophenyl ether] and chlomethoxynil [2, 4-dichlorophenyl-3'-methoxy-4'-nitrophenyl ether] were investigated. Oxyfluorfen showed greater activity to all plant species than chlomethoxynil. $^{14}C$-oxyfluorfen was little metabolized in roots of the plant species and more slowly absorbed than $^{14}C$-chlomethoxynil. These results suggest that herbicidal activity of oxyfluorfen at the site of action is higher than chlomethoxynil. In the tested plants, rice, barnyardgrass, sorghum, and corn were absorbed less of the oxyfluorfen and chlomethoxynil than the broad leaf plant species. However, no clear relationship was observed between a degree of tolerance and absorption and metabolism of both herbicides by the plant species.

• Korean Journal of Environmental Agriculture
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• v.16 no.3
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• pp.264-268
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• 1997

Microbial metabolites from rhizosphere soil samples mainly inhabitated by Streptomyces are selectively uptaken into plants. The culture broth of a Streptomyces strain K9301 showed a major metabolite which disappeared in the medium 24hrs after planting of seedlings. This metabolite was selectively uptaken in the rice plants as well as the wheat plants. We identified the targeted metabolite showing a strong UV-absorbing spot at Rf 0.6 on TLC to be 2-aminobenzamide.

• Korean Journal of Plant Taxonomy
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• v.43 no.1
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• pp.22-26
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• 2013

We report somatic chromosome numbers 2n = 12 for three Carex sect. Siderostictae Franch. ex Ohwi (Cyperaceae) from Korean populations: Carex ciliatomarginata Nakai, C. okamotoi Ohwi, and C. siderosticta Hance. This study is the first chromosome number report for the species C. ciliatomarginata from Korean populations. As found in other Carex species, all the chromosomes examined in the section exhibit nonlocalized centromere (polycentric or holocentric) and large (more than ca. $1{\mu}m$ long) chromosomes. Considering the basal phylogenetic position of the section in tribe Cariceae Pax, small numbers of large chromosomes have been hypothesized as primitive characters in Cariceae, and our observation supports the hypothesis. Further investigations of chromosomes in Carex are needed for a better understanding of species richness in the genus.

• Korean Journal of Plant Resources
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• v.25 no.2
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• pp.257-270
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• 2012

The taxonomic relationship of 3 taxa in $Carex$ sect. $Siderostictae$ were revealed by morphological and molecular studies. The morphological characteristics of Korean $Carex$ siderosticta Hance, which is a type species of sect. $Siderostictae$, was first reviewed in comparison with previous records in order to identify the difference. Then the distribution map of this species was formulated through previous floral literatures and voucher specimens. Although the leaf shape which is represented by length/width ratio showed a great variation depending on habitat condition, the rhizome creeping patterns, the presence of hair on the surface leaf margin and perigynium were shown to be good diagnostic characters to define delimitation of species level. The results from molecular study supported $C.$ $ciliatomarginata$ Nakai should be ranked independently on species level.

• 한국생물공학회:학술대회논문집
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• 2000.11a
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• pp.634-637
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• 2000

The productivity of natural flavors in alfalfa suspension cultures is low partially due to their low solubility. Thus, by formation inclusion complex of cyclodextrin(CD) with flavor compounds enhancement of the productivity of flavor was attempted in this research. we observed that CD formed inclusion complex with flavor compounds by GC/MS analysis. Also, there was indication that CD played a role as an elicitor in alfalfa suspension cultures.

• Proceedings of the Plant Resources Society of Korea Conference
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• 2002.11b
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• pp.73-73
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• 2002