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Ensemble Classifier with Negatively Correlated Features for Cancer Classification (암 분류를 위한 음의 상관관계 특징을 이용한 앙상블 분류기)

  • 원홍희;조성배
    • Journal of KIISE:Software and Applications
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    • v.30 no.12
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    • pp.1124-1134
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    • 2003
  • The development of microarray technology has supplied a large volume of data to many fields. In particular, it has been applied to prediction and diagnosis of cancer, so that it expectedly helps us to exactly predict and diagnose cancer. It is essential to efficiently analyze DNA microarray data because the amount of DNA microarray data is usually very large. Since accurate classification of cancer is very important issue for treatment of cancer, it is desirable to make a decision by combining the results of various expert classifiers rather than by depending on the result of only one classifier. Generally combining classifiers gives high performance and high confidence. In spite of many advantages of ensemble classifiers, ensemble with mutually error-correlated classifiers has a limit in the performance. In this paper, we propose the ensemble of neural network classifiers learned from negatively correlated features using three benchmark datasets to precisely classify cancer, and systematically evaluate the performances of the proposed method. Experimental results show that the ensemble classifier with negatively correlated features produces the best recognition rate on the three benchmark datasets.

Subsurface Investigation of Dokdo Island using Geophysical Methods (물리탐사기법의 독도 지반조사 적용)

  • Kim, Chang-Ryol;Park, Sam-Gyu;Bang, Eun-Seok;Kim, Bok-Chul
    • Geophysics and Geophysical Exploration
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    • v.11 no.4
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    • pp.335-342
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    • 2008
  • Electrical resistivity and seismic refraction surveys were conducted to investigate geologic structures and geotechnical characteristics of the subsurface, along with rock physical property measurements in Dokdo island. The survey results in Seodo island show that the fault adjacent to the fisherman's shelter is a normal fault and extended towards the NW direction, and that Bedded Lapilli Tuff in the downstream was more severely influenced by weathering and erosion than Trachy Andesite II in the upstream of the survey area. In Dongdo island, Trachy Andesite III and Scoria Bedded Lapilli Tuff were severely weathered and eroded, considered as weathered to soft rock formations, and their weathered zone becomes thicker towards the antiaircraft facility in the NE direction of the survey area. The study results also illustrate that Trachyte and Trachy Andesite are hardest, Massive Tuff Breccia is next, and Stratified Ash Tuff is the most soft rock in Dokdo island.

The National Survey of Lung Cancer in Korea (폐암의 전국 실태 조사)

  • 대한결핵 및 호흡기학회 학술위원회
    • Tuberculosis and Respiratory Diseases
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    • v.46 no.4
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    • pp.455-465
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    • 1999
  • Background: Even though lung cancer has become a major cancer in Korea, national survey for lung cancer has not been available except several reports from individual hospitals. Methods: Korean Academy of Tuberculosis and Respiratory Diseases retrospectively investigated the characteristics of lung cancer diagnosed from January 1997 to December 1997 at general hospitals over 400 beds. Results: Among 3,794 patients, 76.8% are smokers and 89.8% of male patients are smokers. Squamous cell carcinoma is the leading type of lung cancer(44.7%) followed by adenocarcinoma(27.9%). Smoking rate in adenocarcinoma was significantly lower than in squamous cell carcinoma and small cell cancer. Cough is the most common symptom, however, 7.2% are asymptomatic. Bronchoscopic biopsy has a main role in the diagnosis of squamous cell carcinoma and small cell cancer but percutaneous needle biopsy has more important role in adenocarcinoma. Two-thirds of NSCLC patients were found in unresectable advanced stages. Conclusion: In contrast to other countries, squamous cell carcinoma is still the most frequent type of lung cancer. High proportions of smoker and advanced, unresectable lung cancer urge us to develop the program for cessation of smoking and early detection.

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A Study on Developed Earth Pressures behind Retaining Walls Built Close to Rock Faces (암 근처에 설치되는 옹벽의 발생토압에 관한 연구)

  • 김홍택
    • Geotechnical Engineering
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    • v.6 no.4
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    • pp.7-18
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    • 1990
  • To deal with the case of a rigid retaining wall built close to a stable rock face with cohesionless backfill, analytical solution methods Proposed by Spangler- Handy and Sokolovskii are modified. The modified solution methods, taking into account different friction angles along the wall and the rock face, can estimate the developed static or dynamic horizontal earth pressures behind vertical retaining walls experiencing various types of outward wall movements. The range of application of each proposed method, which is represented by the ratio of the distance between the wall and the rock face to the height of the wall, is compared with each other and also is examined for different wall friction angles as well as soil friction angles. Further, the result predicted by the modified Spangler - Handy solution method is compared with that from the experimental model test on sand. The comparison shows in general good agreements at various stages of retaining wall rotation about its toe. Finally results of analytical parametric study, together with the design charts, are presented to demonstrate the effects of wall friction angles and horizontal acceleration coefficients.

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Estimating the Value of Statistical Life by Analysing Disease Protective Behavior: Focusing on Medical Examination of Cancer (질병예방행위 분석을 통한 확률적 인간생명가치 추정: 암 검진 행위 분석을 중심으로)

  • Shin, YoungChul
    • Environmental and Resource Economics Review
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    • v.17 no.4
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    • pp.845-873
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    • 2008
  • This study estimates the VSL(value of a statistical life) as well as the WTP(willingness to pay) for mortality risk reduction using sample selection model with data on liver cancer examination which is associated with little possibility of multi-purpose(i.e. joint production) in averting behavior. The marginal benefits of mortality risk reduction are estimated by applying for household production function model with medical expense and the time required for medical examination of liver cancer. Individuals are more likely to take liver cancer test if they are male, older, higher educated, those with spouse, smoker, more income of household, and more anxious about their health. The costs of liver cancer examination are statistically significantly affected with expected signs by size of mortality risk reduction, sex, period of eduction, those with spouse, and household income. The marginal effect of mortality risk reduction owing to taking liver cancer examination is estimated at 321,097 won. The costs of liver cancer examination are increased by 905 won with more one year of education period and by 1,743 won with more one million won in household income. On liver cancer examination, male spends more 12,310 won than female and those with spouse pay more 7,969 won than those without spouse. Therefore the VSL from mortality risk reduction due to liver cancer examination is 321.10 million won at mean size of mortality risk reduction and mean cost of liver cancer examination. The results of sensitivity tests on costs and effects of liver cancer test shows that the VSLs are estimated in a range from 160.55 million won to 642.19 million won.

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Relation of the Activities of Plasminogen Activator and Plasmin-like Protease with Malignant Behavior of Skin Tumor of Rats (Plasminogen Activator 및 Plasmin-like Protease활성도의 변화와 쥐 피부암의 악성)

  • Yun Kee;Park, Sang C.;Doo B. Ha;Chin H. Chung
    • The Korean Journal of Zoology
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    • v.31 no.3
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    • pp.185-190
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    • 1988
  • To investigate whether malignant behavior of skin tumor correlates with changes in the level of proteolytic activities in skin tumors, rats were treated with 7,12-dimethylbenzanthracene followed by photbor ester. Tumors induced upon the treatrnents exhibited more than 20-fold increase in the activity of plasminogen activator and about 3-fold of plasmin-like activity. as compared to those in treated controls. Furthermore, the former activity was raised to about 6-fold even in the preneoplastic dssues of the skin tissues. On the other hand, the proteolytic activity against casein and insulin decreased to several-fold in the tumor tissues while antitrvpsin activity remained similar in both tumor and controls. Thus, the increase in the activities of plasmInogen activator and plasminlike enzyme appears to occur as a charaderistic to skin cancer and may involve in invasion and metsstasis of the tumor.

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Characteristics of Asbestos Occurrence in the Vicinity of Serpentine Mines in the Western Part of Chungnam: A Study Based on the Hongseong and Bibong Mine Areas (충남 서부 사문석 광산 인근에서의 석면 산출 특성: 홍성 및 비봉광산을 중심으로)

  • Seokhwan Song
    • Korean Journal of Mineralogy and Petrology
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    • v.36 no.4
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    • pp.233-257
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    • 2023
  • Asbestos minerals are found at rocks and soils of the Hongseong and Bibong serpentine mines, western part of Chungnam. The area consists of and metasediment, and Mesozoic igneous intrusives with minor age-known gneiss complexes and Mesozoic sediments. With detailed geological investigations, rock samples for the serpentinite and amphibolite areas are collected at sites containing asbestos. Representative asbestos and rock samples are analysed by PLM, XRD, SEM and EPMA. Serpentinites are found as steeply dipping faults with adjacent gneiss complex to the NNE direction. Repeated alteration, including serpenitization and talcification, is found at the emplacement direction for the serpentinite body. Amphibollites occur as intrusives and stratiforms within the Precambrian gneiss complex. Serpentinite and amphibolite (or amphibole schist) contain amphiboles either as asbestiform or non-asbestiform. Varying amounts of asbestos minerals, including chrysotile, tremolite asbestos and actinolite asbestos, are found within the serpentinites. The asbestos minerals are found near the cracks or fractures and along the bedding plane. They occur as cross fiber, slip fiber and mass fiber types. Varying amounts of amphibole asbestos minerals, such as tremolite and actinolite asbestos, are found within amphibolites and as a mass fiber type. Overall results suggest that rocks of the serpentine mines contain serpentine and amphibole type asbestos minerals originated from the hydrothermal alteration. Considering construction nearby the mines and environmental risks by the asbestos, additional land management plans are required.

Formation of Mixed-layered Chlorite/Vermiculite and Halloysite from Clinochlore by Weathering in Anorthosite in the Sancheong District (산청지역 회장암내 단사녹니석의 풍화에 의한 녹니석/버미큘라이트 혼합층 광물 및 할로이사이트의 생성)

  • Jeong, Gi Young;Kim, Soo Jin
    • Journal of the Mineralogical Society of Korea
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    • v.6 no.2
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    • pp.145-155
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    • 1993
  • Mineralogical, textural, and chemical changes of chlorite by weathering in anorthosite in the Sancheong district were stucdied using X-ray diffraction, scanning electron microscopy, and electron microprobe analysis. Chlorite in anorthosite corresponds to ferroan clinochlore with IIb structural type. It weatheres firstly to regularly mixed-layered chlorite/vermiculite(C/V) and then, to halloysite without the intermediate stage of vermiculite. Clinochlore packet cleaves and transforms to several thin packets of C/V, which subsequently change to halloysite developint fan-sharped structures by large volume increase. Direct halloysitization of C/V is attributed to the rapid weathering of anorthosite.

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Rock Mass Classification and Its Use in Blast Design for Tunneling (암분류기법과 터널굴착을 위한 발파설계에의 활용)

  • Ryu Chang-Ha;SunWoo Choon;Choi Byung-Hee
    • Explosives and Blasting
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    • v.24 no.1
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    • pp.63-69
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    • 2006
  • Building tunnels means dealing with what rock is encountered. Relocation of the site of the underground structure is rarely possible. Tunneling engineers and miners have to cope with the quality of the rock mass as it is. Different tunneling philosophies and different rock classification methods have been developed in various countries. Most of the rock classification methods are based on the response of the rock mass to the excavation. Tunnel support requirements could be assessed analytically, supplemented by rock mass classification predictions, and verified by measurements during construction. Rock mass classifications on their own should only be used for preliminary, planning purposes and not for final tunnel support. Design of blast pattern in tunneling projects in Korea is also mostly prepared according to the general rock classification methods such as RMR or Q. They, however, do not take into account the blast performance, and as a consequence, produce poor blasting results. In this paper, the methods of general rock classification and blast design for tunnel excavation in Korea are reviewed, and efforts to develop a new classification method, reflecting the blasting performance, are presented.

Analysis of Virus Types by a Latent Variable Model (Latent variable model에 의한 바이러스 유형 분석)

  • Kim Soo-Jin;Joung Je-Gun;Tae Kang Soo;Zhang Byoung-Tak
    • Proceedings of the Korean Information Science Society Conference
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    • 2005.11b
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    • pp.262-264
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    • 2005
  • 인유두종 바이러스(Human Papillomavirus: HPV)는 사마귀로부터 생식기 및 배설기의 침윤성 암에 이르기까지 여러 질병과 연관되어 있음이 알려져 있다. 현재 200종 이상이 알려져 있고, 이 중 85개는 전체 유전자가 밝혀져 있다. HPV 감염 시 만들어지는 단백질 중 E6. E7 단백질은 암 억제 유전자(p53, pRb)에 결합하여 세포의 암 억제 기능을 저하시키고 이로 인해 암을 발생시킨다. 본 논문은 암 발생과 밀접한 관련이 있는 HPV의 E6 단백질 서열과 HPV 유형(HPV Type)을 가지고, PLSA (Probabilistic Latent Semantic Analysis) 방법을 이용하여 HPV를 클러스터링(clustering) 해 보았다. 실험 결과, 특정 클러스터는 질병과 밀접하게 연관되어 있으며, 이와 관련된 주요 서열 분석이 가능함을 보여주고 있다.

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