• Proceedings of the Korean Information Science Society Conference
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• 2012.06a
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• pp.391-393
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• 2012

반복적인 문자열에 대한 연구는 압축알고리즘이나 모티프검출, 염기서열 분석 등 다양한 분야와 관련되어 연구되고 있다. 반복문자열 연구 중에서도 어느 정도의 불일치를 허용하는 근사반복문자열 연구가 활발히 이루어지고 있다. 본 논문에서는 길이가 각각 m과 n인 문자열 p와 x가 주어졌을 때, p의 x에 대한 거리합기반 근사주기에 대해 정의하고 최소 주기거리를 찾는 문제를 제시한다. 그리고 가중편집거리를 사용했을 때 O($mn^2$)시간, 편집거리를 사용했을 때 O(mn)시간, 해밍거리를 사용했을 때 O(n)시간에 문제를 해결하는 알고리즘을 제시한다.

• Journal of KIISE
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• v.44 no.8
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• pp.760-766
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• 2017

Repetitive strings have been studied in diverse fields such as data compression, bioinformatics and so on. Recently, two problems of approximate periods of strings over integer alphabets were introduced, finding minimum ${\delta}-approximate$ periods and finding minimum ${\gamma}-approximate$ periods. Both problems can be solved in $O(n^2)$ time when n is the length of the string. In this paper, we present two parallel algorithms for solving the above two problems in O(n) time using $O(n^2)$ threads, respectively. The experimental results show that our parallel algorithms for finding minimum ${\delta}-approximate$ (resp. ${\gamma}-approximate$) periods run approximately 19.7 (resp. 40.08) times faster than the sequential algorithms when n = 10,000.

• Journal of KIISE
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• v.43 no.11
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• pp.1275-1280
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• 2016

Existing techniques for string similarity search first generate a set of candidate strings and then verify the candidates. The efficiency of string similarity search is highly dependent on candidate generation methods. State of the art techniques select fixed length q-grams from a query string and generate candidates using inverted lists of the selected q-grams. In this paper, we propose a technique to generate candidates using variable length grams of a query string and develop a dynamic programming algorithm that selects an optimal combination of variable length grams from a query string. Experimental results show that the proposed technique improves the performance of string similarity search compared with the existing techniques.

• Journal of KIISE:Computing Practices and Letters
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• v.15 no.1
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• pp.67-71
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• 2009

Recently, the string non-inclusion related problems have been studied vigorously. Given a set of strings F over a constant size alphabet, consider a string x such that x does not include any string in F as a substring. We call x a Common Non-SuperString(CNSS for short) of F. Among the CNSS's of F, the longest one with finite length is called the Longest Common Non-SuperString(LCNSS for short) of F. In this paper, we first propose a new graph model using prefixes of F. Next, we suggest an O(N)-time algorithm for finding the LCNSS of F, where N is the sum of the lengths of all the strings in F.

• Journal of KIISE:Computer Systems and Theory
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• v.37 no.6
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• pp.323-329
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• 2010

The edit distance problem is finding the minimum number of edit operations to transform a string into another one. It is one of the important problems in algorithm research and there are some algorithms that compute an optimal edit distance for the one-dimensional languages such as the English alphabet. However, there are a few researches to find the edit distance for the more complicated language such as the Korean or Chinese alphabet. In this paper, we define the measure of the edit distance for the Korean alphabet with the phoneme classification system to improve the previous edit distance algorithm and present an algorithm for the edit distance problem for the Korean alphabet.

• KIISE Transactions on Computing Practices
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• v.20 no.9
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• pp.498-506
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• 2014

With the development of smart transportation, people are likely to find their paths by using navigation and map application. However, the existing retrieval system cannot output the correct retrieval result due to the inaccurate query. In order to remedy this problem, set-based POI search algorithm was proposed. Subsequently, additionally a method for measuring POI name similarity and POI search algorithm supporting classifying duplicate characters were proposed. These algorithms tried to compensate the insufficient part of the compensate set-based POI search algorithm. In this paper, accuracy improvement methods for measuring string similarity in POI data retrieval system are proposed. By formulization, similarity measurement scheme is systematized and generalized with the development of transportation. As a result, it improves the accuracy of the retrieval result. From the experimental results, we can observe that our accuracy improvement methods show better performance than the previous algorithms.

• Journal of Digital Convergence
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• v.12 no.12
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• pp.265-275
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• 2014

This paper introduces a new algorithms for reconstructing the suffix tree of character string, when a substring id deleted from the string or a string is inserted into the string as a substring. The algorithem has two main functions, delete-structure and insert-structure. The main objective of this algorithm is to save the time for constructing the suffix tree of an edited string, when the suffix tree of the original string is available. We tested the performance of this algorithm with some DNA sequences. This test shows that delete-reconstructing can save time when the length of the subsequence deleted is less than 30% of the original sequence, and the insert-reconstructing takes less time with regard to the length of inserted sequence.

• Journal of KIISE:Computer Systems and Theory
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• v.32 no.6
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• pp.268-278
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• 2005

We consider constructing the generalized suffix way of strings A and B when the suffix arrays of A and B are given, j.e., merging two suffix arrays of A and B. There are efficient algorithms to merge some special suffix arrays such as the odd array and the even array. However, for the general case that A and B are arbitrary strings, no efficient merging algorithms have been developed. Thus, one had to construct the generalized suffix arrays of A and B by constructing the suffix array of A$\#$B$\$$ from scratch, even though the suffix ways of A and B are given. In this paper, we Present efficient merging algorithms for the suffix arrays of two arbitrary strings A and B drawn from constant and integer alphabets. The experimental results show that merging two suffix ways of A and B are about 5 times faster than constructing the suffix way of A$\#$B$\$$ from scratch for constant alphabets. Our algorithms include searching all suffixes of string B in the suffix array of A. To do this, we use suffix links in suffix ways and we developed efficient algorithms for computing the suffix links. Efficient computation of suffix links is another contribution of this paper because it can be used to solve other problems occurred in bioinformatics that should search all suffixes of a given string in the suffix array of another string such as computing matching statistics, finding longest common substrings, and so on. The experimental results show that our methods for computing suffix links is about 3-4 times faster than the previous fastest methods.

• Journal of the Korea Institute of Information and Communication Engineering
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• v.10 no.5
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• pp.983-989
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• 2006

Current emigration and immigration control inspects passports by the naked eye, registers them by manual input, and compares them with items of database. In this paper, we propose the method to recognize information codes of passports. The proposed passport recognition method extracts character-rows of information codes by applying sobel operator, horizontal smearing, and contour tracking algorithm. The extracted letter-row regions is binarized. After a CDM mask is applied to them in order to recover the individual codes, the individual codes are extracted by applying vertical smearing. The recognizing of individual codes is performed by the RBF network whose hidden layer is applied by ART 2 algorithm and whose learning between the hidden layer and the output layer is applied by a generalized delta learning method. After a photo region is extracted from the reference of the starting point of the extracted character-rows of information codes, that region is verified by the information of luminance, edge, and hue. The verified photo region is certified by the classified features by the ART 2 algorithm. The comparing experiment with real passport images confirmed the good performance of the proposed method.

• Smart Media Journal
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• v.9 no.2
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• pp.33-38
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• 2020

Order preserving matching refers to the problem of reporting substrings of a given text where there exists order isomorphism with the pattern. In this paper, we propose a new algorithm based on filtering and evaluation. The proposed algorithm is simple and easy to implement, and runs in linear time on average. Experimental results show that it works efficiently with real world data.