• Korean Journal of Environment and Ecology
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• v.6 no.1
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• pp.25-43
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• 1992

A survey of Orimok, Yongsil and Donnaeko area forest in Mt. Halla. was conducted using 71 sample plots of 500$m^2$ size. In the analysis of -actual vegetation, Carpinus tschonoskii and C. laxiflora community covered 53.7%, Quercus grosseserrata - Q. serrata community 25.8%, Pinus densiflora community 8.3%, Abies koreana community 4.5% and these communities covered 92.2% of Mt. Halla forest. The degree of 8, 9 and 10 in human disturbance of vegetation covered 64.5, 28.6 and 6.9% respectively. The classification by TWINSPAN and DCA ordination were applied to the study area in order to classify them into several groups based on woody plants and environmental variables. By two techniques, the plant community were divided into several groups by the aspect and altitude. The dividing groups are C. tschonoskii community, C. tschonoskii - Q. serrata community, P. densiflora - C. tschonoskii community, P. densiflora - C. laxiflora community, C. laxiflora community, C. laxifrora - Daphniphyllum macropodum - Eurya japonica community, P. densiflora community. The successional trends of tree species by both techniques seem to be from P. densiflora. Sorbus alnifolia through Q. serrata. Maackia faurier to C. tsihonoskii in Orimok and Yongsil area and from P. densifiora to C. laxiflora in Donnaeko area. There was no difference between the stand scores of. DCA and environmental variables.

• Journal of the Korean Institute of Landscape Architecture
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• v.47 no.3
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• pp.81-92
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• 2019

This study was conducted to establish vegetation structure characteristics and vegetation management plan of the cultural landscape forests located around Unmun Temple in Cheongdo-gun and to provide the basic data needed to manage the cultural landscape forests. The landscape characteristics are analyzed in two perspectives including the landscape as viewed from inside and outside of Unmun Temple and eight landscape views are selected. Main views are Pinus densiflora forest and Abies holophylla forest around Unmun Temple. As a result of the survey of existing vegetation around Cheongdo-gun Unmun Temple, P. densiflora forests and P. densiflora-A. holophylla forests are widely distributed, occupying 79.2% of the forest. The plant community structure was classified into seven types according to the three topographic characteristics, flat forests, slope forests, and lower forests, Which were divided into a total of 30 survey plots and the average relative importance percentage was determined. The P. densiflora community on the flat are dominated by Carpinus tschonoskii in Under-canopy. The P. densiflora-A. holophylla community on the flat had a relatively high rate of domination in the shrubs. There were no competing species for the A. holophylla community on the plat. The large standard P. densiflora and the small standard P. densiflora were expected to be confined by P. serrulata var. pubescens and the Quercus variabilis on the slopes. The managed P. densiflora community had a relatively high rate of P. densiflora domination in the shrubs. The P. densiflora community on the lowland was dominated by Styrax japonicus and P. serrulata var. pubescens. The Shannon species diversity index was 0.2360 to 1.4088. The results of the correlation analysis with P. densiflora, A. holophylla and other species were P. densiflora had negative correlation with Acer mono, Corylus heterophylla var. heterophylla, Zelkova serrata and A. holophylla, and A. holophylla have negative correlation with S. japonicus and P. densiflora. Landscape characteristics and plant community structures are analyzed to propose management methods of maintaining and restoring The P. densiflora and A. holophylla cultural forest landscapes around Unmun Temple.

• Korean Journal of Environment and Ecology
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• v.6 no.1
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• pp.44-54
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• 1992

A survey of subalpine zone (altitude is 1, 440-1, 700m) in Mt. Halla, was conducted using 37 sampling plots of l00$m^2$ size. The classification by TWINSPAN and RA. DCA ordination were applied to the study area in order to classify them based on woody plants and environmental variables. And to investigate vegetation deterioration by livestock's and user's impact on subalpine zone, seventeen plots were set up. By TWINSPAN techniques, the plant community were divided into five groups by the altitude. The dividing groups are Abies koreana-Taxus cuspidata community, Rhododendron yedoense var. poukhanense-Rh. mucronulatum var. ciliatum-Sasa quelpaertensis community, Ilex crenata- Elaeagnus umbellata-S. quelpaertensis community, Rh. yedoense var. poukhallense-Juniperus chinensis var. sargentii-Rh. mucronulatum var. ciliatum community and Empetrum nigrum var. japonicum-J. chinensis var. sargentii community. The species divirsity of plant community were decreased severely by livestock's and user's impact.

• Korean Journal of Microbiology
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• v.47 no.3
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• pp.275-280
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• 2011

In order to evaluate the diversity and change of bacterial population during the manufacturing process of traditional soybean paste (doenjang), bacterial communities were analyzed using 16S rRNA gene-based pyrosequencing. In rice straw, the most important inoculum source for fermentation, the bacterial sequences with a relative abundance greater than 1% were assigned to four phyla, Proteobacteria (71%), Actinobacteria (20.6%), Bacteroidetes (4.2%), and Firmicutes (1.3%). Unlike bacterial community composition of rice straw, a different pattern of bacterial population in meju was observed with predominantly high abundance (99.1%) of Firmicutes. Phylum composition in young doenjang was almost same as that of meju. Major genera in young doenjang were Bacillus (81.3%), Clostridium (6.9%) and Enterococcus (6.3%) and the predominant species among bacterial population was B. amyloliquefaciens (63.6%). Abundance of the phylum Firmicutes in mature doenjang was 99.98%, which was even higher value than those in meju and young doenjang. Predominant species in mature doenjang were B. amyloliquefaciens (67.3%), B. atrophaeus (12.7%), B. methylotrophicus (6.5%), B. mojavensis (3.2%), and B. subtilis. (2.5%), which were also identified as major species of the microbial flora in meju. These results suggested that rice straw was a primary source for supplement of Bacillus species in manufacturing the traditional doenjang and that some species of Bacillus strains were mainly involved in the fermentation process of traditional doenjang.

• Journal of the Korean Data and Information Science Society
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• v.23 no.1
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• pp.39-51
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• 2012

Cluster analysis has proven to be a useful tool for investigating the association structure among genes and samples in a microarray data set. We applied several cluster validation measures to evaluate the performance of clustering algorithms for analyzing microarray gene expression data, including hierarchical clustering, K-means, PAM, SOM and model-based clustering. The available validation measures fall into the three general categories of internal, stability and biological. The performance of clustering algorithms is evaluated using simulated and SRBCT microarray data. Our results from simulated data show that nearly every methods have good results with same result as the number of classes in the original data. For the SRBCT data the best choice for the number of clusters is less clear than the simulated data. It appeared that PAM, SOM, model-based method showed similar results to simulated data under Silhouette with of internal measure as well as PAM and model-based method under biological measure, while model-based clustering has the best value of stability measure.

• Korean Journal of Environment and Ecology
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• v.9 no.2
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• pp.115-125
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• 1996

To investigate the plant community structure in Pinus densiflora forests of Odaesan National Park, fourty plots(each size was 100m$^{2}$) were set up in Sogumgang and Woljongsa area. The classification by the TWINSPAN and DCA ordination techniques were applied to the survey area. Pinus densiflora forests were divided into five community types, which were Betula schmidtii-Acer pseudosieboldianum-Styrax obassia, Quercus variabilis-S. obassia, Q. serrata-Q. vareabilis, Q. mongolica, Abies holo[hylla. The successional trend of Pinus densiflora forests was seem to be seral stage from Pinus densiflora to Quercus spp.. And Abies holophylla was competition species with Pinus densiflora in Woljongsa area. So, management of Pinus densiflora forests requires to conserve for the diversity of mountain landscape resource and gene science.

• Korean Journal of Microbiology
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• v.38 no.3
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• pp.192-197
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• 2002

Fluorescent in situ hybridization (FISH) with rRNA-targeted oligonucleotide probes was used to compare the community structures of free-living and aggregated bacteria at thawing period in Lake Baikal. Targeted groups were Eubacteria, $\alpha$-, $\beta$-, $\gamma$- proteobacteria groups, Cytophaga-Flavobacterium group and Planctomycetales. Total bacterial numbers of free-living bacteria were ranged from $0.2{\times}10^6\cells{\cdot}ml^-1$ to $3.2{\times}10^6\cells{\cdot}ml^-1$, which were decreasing with depth, while the aggregated bacterial numbers were dramatically increasing from $0.4{\times}10^4 to 3.3{\times}10^4 \cells{\cdot}ml^-1$ with depth. The ratios of EUB probe binding cells to DAPI counts were ranged from 52.3 to 74.1% in free-living bacteria, and from 39.6 to 66.7% in the aggregated bacteria, respectively. Community structures of the aggregated bacteria were very different from each free-living bacteria at every depth. At 25 m depth, where the chlorophyll a concentration was highest, both structures were quite different from those of surface layers, rendering the fact that the community structures might be affected by phytoplankton. The vertical profile of community structure of aggregated bacteria is particular. The proportion of $\beta$-proteobacteria group was increasing with depth and it was 51.8% at 100 m, but the dominant group was $\gamma$-pro-teobacteria group at 250 m. Taken together, the biodiversity and succession of aggregated bacteria are quite different from free-living bacteria.

• Korean Journal of Remote Sensing
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• v.19 no.2
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• pp.135-147
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• 2003

This study used the multistage hierarchical clustering image classification to analyze the satellite images for the land-cover types of an area in the Korean peninsula. The multistage algorithm consists of two stages. The first stage performs region-growing segmentation by employing a hierarchical clustering procedure with the restriction that pixels in a cluster must be spatially contiguous, and finally the whole image space is segmented into sub-regions where adjacent regions have different physical properties. Without spatial constraints for merging, the second stage clusters the segments resulting from the previous stage. The image classification of hierarchical clustering, which merges step-by step two small groups into one large one based on the hierarchical structure of digital imagery, generates a hierarchical tree of the relation between the classified regions. The experimental results show that the hierarchical tree has the detailed information on the hierarchical structure of land-use and more detailed spectral information is required for the correct analysis of land-cover types.

• The Korean Journal of Mycology
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• v.47 no.3
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• pp.199-208
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• 2019

In this study, the community structures of the ectomycorrhizal (ECM) fungi in the roots of Abies koreana and Taxus cuspidata were investigated at different altitudes of Mt. Halla. We identified the collected ECM root tips based on morphological characteristics and phylogenetic analysis through sequencing of the rDNA ITS regions. From the roots of A. koreana and T. cuspidata, 11 species and 12 species were identified, respectively. The Shannon's index and species evenness and abundance of the ECM fungi were higher in the higher than lower regions, regardless of host plant species, however, the number of ECM root tips showed the opposite pattern. The community similarity among the ECM fungi in A. koreana was significantly higher than that among the ECM fungi in T. cuspidata or than that between A. koreana and T. cuspidata (p < 0.05). These results could be useful for the conservation and management of the habitat of A. koreana, which is threatened with extinction due to increasing ambient air temperature.

• Korean Journal of Environment and Ecology
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• v.5 no.1
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• pp.42-53
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• 1991

The Hwaomsa valley forest and the Piagol valley rarest in Mt. Chiri were studied to investigate forest structure and succession. Thirty plots in the Hwaomsa valley forest and thirty-nine plots in the Piagol valley forest were set up, and vegetation analysis of TWINSPAN classification and DCA ordination was carried out. The size of each plot was 20m $\times$ 25m, and the trees above 2cm DBH in each plot were measured. The Hwaomsa valley forest and the Piagol valley forest were classified into four communities and three communities by the altitude, respectively. The successional trends of major tree species seem to be from Pinus densiflora and Quercus mangalica through Quercus serrata to Carpinus spp. in the Hwaomsa valley forest. and from Quercus mongalica through Quercus serrata to Carpinus Spp. in the Piagol valley forest. The Hwaomsa valley is assumed to be interfered by the man more, and develop into the climax less than the Piagol rarest.