• 제목/요약/키워드: ${\beta}$ form crystal

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고초균 아종 spizizenii의 α-acetolactate decarboxylase 결정 구조 (Crystal structure of α-acetolactate decarboxylase from Bacillus subtilis subspecies spizizenii)

  • 엄지영;오한별;윤성일
    • 미생물학회지
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    • 제55권1호
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    • pp.9-16
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    • 2019
  • 다양한 미생물은 세포와 주변의 과산화를 방지하고 여분의 에너지를 보관하기 위해 ${\alpha}$-acetolactate decarboxylase(ALDC)를 이용해 아세토인을 생성한다. 아세토인은 안전한 식품 향미 개선제이기 때문에 ALDC를 이용한 아세토인 생합성에 많은 산업체가 관심을 가지고 있다. ALDC는 ${\alpha}$-acetolactate의 탈카르복실화 반응을 통해 아세토인을 생산하는 금속 의존 효소이다. 본 논문에서는 고초균 아종 spizizenii의 ALDC(bssALDC) 결정구조를 $1.7{\AA}$ 해상도에서 보고한다. bssALDC는 두 개의 ${\beta}$-sheet가 중앙부를 형성하는 ${\alpha}/{\beta}$ 구조를 가진다. bssALDC는 중앙부의 소수성 상호작용과 주변부의 친수성 상호작용을 통해 이합체를 형성한다. bssALDC는 세 개의 histidine 잔기와 세 개의 물 분자를 이용해 아연 이온에 배위결합한다. 구조와 서열의 비교 분석에 기초하여 아연 이온과 이 주변부 bssALDC 잔기들이 bssALDC의 효소 활성부위임을 제안한다.

Crystal Structure of Penicillin V Potassium Salt

  • Kim, Whan-Chul;Yi, Seung-Ho;Shin, Jung-Mi;Yoon, Tae-Sung
    • Bulletin of the Korean Chemical Society
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    • 제14권6호
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    • pp.713-717
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    • 1993
  • The crystal structure of the potassium salt of penicillin V has been studied by the X-ray crystallographic methods. Crystal data are as follows; potassium 3,3-dimethyl-7-oxo-6-phenoxyacetoamido-4-thia-1- azabicyclo[3.2.0]-heptane-2${\alpha}$-carboxylate, $K^+{\cdot}C_{16}H_{18}N_2O_5S^-$, $M_r$= 388.5, triclinic, Pl, a= 9.371 (1), b= 12.497 (2), c= 15.313 (2) ${\AA},\;{\alpha}= 93.74\;(2),\;{\beta}=99.32\;(1),\;{\gamma}=90.17\;(1)^{\circ},\;V=1765.7\;(2)\;{\AA}^3$, Z=4, $D_m=1.461\;gcm^{-1},\;{\lambda}(Cu\;K{\alpha})=1.5418\;{\AA},\;{\mu}=40.1\;cm^{-1}$, F(000)=808, T=296 K. The structure was solved by the heavy atom and difference Fourier methods with intensity data measured on an automated four-circle diffractometer. The structure was refined by the full-matrix least-squares method to a final R= 0.081 for 3563 observed $[I_0{\geq}2{\sigam}(I_0)]$ reflections. The four independent molecules assume different overall conformations with systematically different orientations of the phenyl groups although the penam moieties have the same closed conformations. There are intramolecular hydrogen bonds between the exocyclic amide nitrogen and phenoxy oxygen atoms. The penam moiety is conformationally very restricted although the carboxyl and exocyclic amide groups apparently have certain rotational degrees of freedom but the phenyl group is flexible about the ether bond despite the presence of the intramolecular N-H${\cdots}$O hydrogen bond. There are complicated pseudo symmetric relationships in the crystal lattice. The penam moieties are related by pseudo 20.5 screw axes and the phenyl groups by pseudo centers of symmetry. The potassium ions, related by both pseudo symmetries, form an infinite zigzag planar chain parallel to the b axis. Each potassium ion is coordinated to seven oxygen atoms in a severely distorted pentagonal bipyramid configuration, forming the infinite hydrophilic channels which in turn form the molecular stacks. Between these stacks, there are only lipophilic interactions involving the phenyl groups.

Synthesis of Oxide Ceramic Powders by Polymerized Organic-Inorganic Complex Route

  • Lee, Sang-Jin;Lee, Chung-Hyo;Waltraud M. Kriven
    • 한국결정성장학회:학술대회논문집
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    • 한국결정성장학회 2000년도 Proceedings of 2000 International Nano Crystals/Ceramics Forum and International Symposium on Intermaterials
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    • pp.151-163
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    • 2000
  • A polymerized organic-inorganic complexation route is introduced for the synthesis of oxide ceramic powders. Polyvinyl alcohol was used as the organic carrier for precursor ceramic gel. Porous and soft powders, which have a high specific surface area, were obtained after calcinating the aerated precursors. The PVA content and its degree of polymerization had a significant influence on the homogeneity of the final powder. In particular, attrition milling process with the porous powder resulted in ultra-fine particles. In the case of the preparation of cordierite powder, nano-size powder, which has a high specific surface area of 181 ㎡/g, was obtained by the milling process. The complexation route was also applied to the synthesis of unstable phase in room temperature like beta-cristobalite, high temperature form of silica.

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Monoethanolamine 鹽酸鹽의 結晶構造 (The Crystal Structure of Monoethanolamine Hydrochloride)

  • 구정회;이오재;신현소
    • 대한화학회지
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    • 제16권1호
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    • pp.6-12
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    • 1972
  • The crystal structure of monoethanolamine hydrochloride is triclinic P1 with two formula units in a cell of dimensions a = $4.42\pm0.02$, b = $7.44\pm0.02$, c = $7.48\pm0.02$, $\alpha$ = $102.4\pm0.3$, $\beta$ = $91.1\pm0.3$, $\gamma$ = $77.2\pm0.3^{\circ}.$ The configuration of monoethanolamine is a gauche form with dihedral angle, $90^{\circ}$. The nitrogen atom forms four hydrogen bonds, three to Cl- ions(3.15, 3.24, $3.28\AA)$ and one to a hydroxyl group of another molecule (N${\cdot}{\cdot}{\cdot}$O, $2.90{\AA})$. The oxygen also forms two such bonds, one to a Cl- ion $(3.14\AA)$, one to an amine group of another molecule (O${\cdot}{\cdot}{\cdot}$N, $2.90{\AA}).$ Molecules are linked into two-dimensional network by hydrogen bonds.

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The Geometrical Isomerization on Acidification in Hexamolybdoheteropoly Oxometalate. The Crystal Structure of $(NH_{4})_{4.5}[H_{3.5}\alpha-PtMo_{6}O_{24}].\;1.5H_{2}O,\;(NH_{4})_{4}[H_{4}\beta-PtMo_{6}O_{24}].\;1.5H_{2}O,\;and\;K_{3.5}[H_{4.5}\alpha-PtMo_{6}O_{24}].\;3H_{2}O$

  • Lee, Uk;Yukiyoshi Sasaki
    • Bulletin of the Korean Chemical Society
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    • 제15권1호
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    • pp.37-45
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    • 1994
  • $(NH_4)_{4.5}[H_{3.5}{\alpha}-PtMo_6O_{24}]{\cdot}1.5\;H_2O(A),\;(NH_4)_4[H_4{\beta}-PtMo_6O_{24}]{\cdot}1.5\;H_2O(B),\;and\;K_{3.5}[H_{4.5}{\alpha}-PtMo_6O_{24}]{\cdot}3\;H_2O(C)$ have been synthesized and their molecular structures have been also determined by single-crystal X-ray diffraction technique. The space groups, unit cell parameters, and R factors are as follows: Compound A, monoclinic, $A_{2/a}$, a= 19.074 (3), b=21.490 (3), c=15.183 (2) ${\AA};\;{\beta}$=109.67 (1) ${\AA}$; z=8; R=0.075($IF_0I>4{\sigma}(IF_0I);$ Compound B, triclinic, P$bar{1}$, a=10.776 (2), b=15.174 (4), c=10.697 (3) ${\AA};\;{\alpha}$ =126.29 (2), ${\beta}$=111.55 (2), ${\gamma}$=93.18 (2) ${\AA}$; Z=2; R=0.046($IF_0I>3{\sigma}(IF_0I);$): Compound C, triclinic, Pl, a=12.426 (2), b=13.884 (2), c=10.089 (1) ${\AA}$; ${\alpha}$=102.59 (2), ${\beta}$=110.73 (1), ${\gamma}$=53.93 (1) ${\AA}$; Z=2; R=0.074 ($IF_0I>3{\sigma}(IF_0I)$. Compounds A and C contain the well-known Anderson structure (planar structure) heteropoly oxometalate having approximate $bar{3}_m(D_{3d})$ symmetry, while compound B contains the bent structure heteropoly oxometalate having appproximate $2_{mm}(C2_v)$ symmetry. The bent structure and the planar one are geometrical isomers. These compounds are rot only novel heteroply molybdates containing platinate(IV) but also the first example of geometrical isomerism in the hexamolybdoheteropoly oxometalates. That isomerization surprisingly occurred because of the change of only 0.5 non-acidic hydrogen atom attached to the polyanion such as $[H_{3.5}{\alpha} -PtMo_6O_{24}]^{4.5-}{\to}[H_4{\beta}-PtMo_6O_{24}]^{4-}{\to}[H_{4.5}{\alpha} -PtMo_6O_{24}]^{3.5-}$. It seems that the gradual protonation of the polyanion plays an important role in that isomerism. These heteropolyanions form dimers by strong hydrogen bonds between two heteropolyanions in the respective crystal system.

炭酸水素루비듐의 結晶構造 (The Crystal Structure of Rubidium Hydrogen Carbonate ($RbHCO_3$))

  • 김문일
    • 대한화학회지
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    • 제13권2호
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    • pp.131-136
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    • 1969
  • The crystal structure of rubidium hydrogen carbonate has been determined by single crystal X-ray diffraction method. the crystals are monoclinic with a = 15.05 $\AA$, b = 5.83 $\AA$, c = 4.02 $\AA$, and $\beta$ = $107^{\circ}.$ There are four chemical units per unit cell and the space-group was fixed as $C2-C^3_2$. Patterson and trial-and-error methods gave the approximate structure and its refinements were made by two-dimentional Fourier summation. The Co3 group is planar with tshhe C-O distances of 1.32 $\AA$, 1.32 $\AA$, and 1.33 $\AA$ within experimental error and the two $CO_3$ groups are linked together to form a complex anion [$H_2C_2O_6$] with the O-H${\cdot}{\cdot}{\cdot}$O distance, 2.53 $\AA.$ Two molecules of $RbHCO_3$ make the dimer structure with two hydrogen bonds. The values of reliability factor for $F_{(hol)}$, $F_{(hko)}$and $F_{(okl)}$are 0.15, 0.15 and 0.17 respectively. Each rubidium ion has eight oxygen neighbours with the Rb-O distances of 2.84~3.11 $\AA.$.

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N-Acetyl-L-cysteine의 결정 및 분자구조 (The Crystal and Molecular Structure of N-Acetyl-L-cysteine)

  • 이영자;서일환
    • 대한화학회지
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    • 제24권3호
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    • pp.193-200
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    • 1980
  • N-Acetyl-L-cysteine, $C_5H_9NO_3S,$의 결정 및 분자구조를 X-선 회절법으로 연구하였다. 이 화합물의 결정은 삼사비등축정계에 속하며 공간군은 $P_1$이다. 단위세포상수는 a = 7.04(3), b = 5.14(2), c = 8.25(3)${\AA}$, ${\alpha}$ = 106(2), ${\beta}$ = 51(1), ${\gamma}$ = 124(2)$^{\circ}$이고, 단위세포는 분자 한개만을 포함하고 있다. Weissenberg 사진촬영으로 얻은 회절반점의 총수는 629개이며 direct method를 적용하여 구조해명을 한 후 full matrix least-squares method로 정밀화하였으며 최종 R값은 0.12이다. C-카르복실기 및 N-아세틸기의 원자들은 각각 평면을 이루고 있다. 카르복실기의 산소원자 O(1)은 이웃분자의 아세틸기의 산소원자 O(3)와 $O-H{\cdot}{\cdot}{\cdot}O$ 수소결합을 하며 그 길이는 2.59${\AA}$이다.

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Ethyl Silicate로부터 Silicon Nitride의 합성(II) : 실화반응에서 첨가제의 영향 (Synthesis of Silicon Nitride from Ethyl Silicate(II) : Effect of Additive on the Nitridation of Silicon Nitride)

  • 오일환;박금철
    • 한국세라믹학회지
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    • 제25권5호
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    • pp.561-569
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    • 1988
  • Mixtures of very small amounts of additive, carbon and silica(about 0.46${\mu}{\textrm}{m}$) which synthesized by the hydrolysis of ethyl silicate, the molar ratio of SiO2/C was fixed to 1/10, was nitrided at 145$0^{\circ}C$. It was considered that the optimum amount of additive to promote the nitridation reaction was below 2.0wt%. By the addition of additive, the nitridation reaction was promoted and formation of $\beta$-Si3N4 was promoted at 145$0^{\circ}C$ for 1hour, but, the nitridation reaction was decreased and the ratio of $\alpha$/$\beta$ of Si3N4, was increased at 145$0^{\circ}C$ for 5 hours. The crystal phase was $\alpha$ phase and the nitridation reaction was promoted and the particle size of silicon nitride was become smaller by the addition of $\alpha$-Si3N4, but silicon nitride of whisker-like form was produced by the addition of transition elements. There was a difference in the lattice constants of $\alpha$-Si3N4, but no difference in its of $\beta$-Si3N4 according to kinds of added substance and reaction time.

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무가압 Annealing 한 Beta-SiC-$TiB_2$계 전도성 복합체의 특성에 미치는 YAG의 영향 (Effects of YAG on the Properties of the ${\beta}-SiC-TiB_2$ System Composites by Pressurless Annealing)

  • 이동윤;주진영;최광수;신용덕
    • 한국전기전자재료학회:학술대회논문집
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    • 한국전기전자재료학회 2002년도 춘계학술대회 논문집 유기절연재료 전자세라믹 방전플라즈마 일렉트렛트 및 응용기술
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    • pp.67-70
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    • 2002
  • The composites were fabricated 61vol% ${\beta}$-SiC and 39vol.% $TiB_2$ powders with the liquid forming additives of 8, 12, 16wt% $Al_2O_3+Y_2O_3$ by pressureless annealing at $1650^{\circ}C$ for 4 hours to form YAG. The result of phase analysis of composites by XRD revealed ${\alpha}$-SiC(6H), $TiB_2$, and YAG($Al_5Y_3O_{12}$) crystal phase. The relative density and the Young's modulus showed the highest value of 82.29% and 54.60 Gpa for composites added with 16wt% $Al_2O_3+Y_2O_3$ additives at room temperature.

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PP의 결정형성에 대한 조사가교와 LDPE 함량의 영향 (Effect of irradiation and LDPE content on crystal formation of PP)

  • 프러산터 다할;김연철
    • 한국산학기술학회논문지
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    • 제15권6호
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    • pp.4039-4045
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    • 2014
  • 전자선 조사 폴리프로필렌과 블랜드의 결정화 거동은 고분자 가공시 중요한 변수중 하나이다. 저밀도폴리에틸렌(linear low density polyethylene, LDPE) 함량에 따라 폴리프로필렌(polypropylene, PP)/LDPE 블렌드를 이축압출기를 이용하여 제조하였다. 조사에 의한 가교반응을 용이하게 하기위해 가교조제로 trimethylolpropane-trimetacrylate (TMPTMA)를 PP/LDPE 블렌드 제조시 첨가하였다. PP/LDPE 블랜드의 조사가교 효율에 대한 LDPE 함량의 영향을 평가하였다. 조사시료의 비등온 결정화과정과 결정구조를 DSC, X-선회절분석(X-ray diffraction, XRD), 그리고 편광현미경(polarized optical microscope, POM)을 이용하여 분석하였다. 조사 후 시료의 용융온도가 감소하는 것은 조사에 의한 PP 사슬의 절단에 의한 것으로 판단된다. Ozawa 지수, n이 4일 때 구형, 3일 때 디스크형, 2일 때 로드형의 결정구조를 나타낸다. Ozawa 분석 결과, 순수 PP의 n 값은 3.8, 30 wt%의 LDPE를 포함하는 시료의 n은 2.3을 나타내었다. LDPE 첨가와 조사에 의해 PP의 결정구조가 구형에서 disk나 rod형으로 변화하는 것을 Ozawa 분석과 POM을 통해 확인하였다. XRD 스펙트럼의 $16.1^{\circ}$에서 나타나는 ${\beta}$ 형 결정구조가 조사 후 시편에서 사라지는데, 이는 가교결합에 의한 것으로 해석할 수 있다.