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1 Birney, E., D. Andrews, M. Caccamo, Y. Chen, L. Clarke, G. Coates, T. Cox, F. Cunningham, V. Curwen, T. Cutts, T. Down, R. Durbin, X. M. Fernandez-Suarez, P. Flicek, S. Graf, M. Hammond, J. Herrero, K. Howe, V. Iyer, K. Jekosch, A. Kahari, A. Kasprzyk, D. Keefe, F. Kokocinski, E. Kulesha, D. London, I. Longden, C. Melsopp, P. Meidl, B. Overduin, A. Parker, G. Proctor, A. Prlic, M. Rae, D. Rios, S. Redmond, M. Schuster, I. Sealy, S. Searle, J. Severin, G. Slater, D. Smedley, J. Smith, A. Stabenau, J. Stalker, S. Trevanion, A. Ureta-Vidal, J. Vogel, S. White, C. Woodwark, and T. J. Hubbard. 2006. Ensembl 2006. Nucleic Acids Res. 34: D556-D561/   DOI   Ndsl View Article
2 Caspi, R., H. Foerster, C. A. Fulcher, R. Hopkinson, J. Ingraham, P. Kaipa, M. Krummenacker, S. Paley, J. Pick, S. Y. Rhee, C. Tissier, P. Zhang, and P. D. Karp. 2006. MetaCyc: A multiorganism database of metabolic pathways and enzymes. Nucleic Acids Res. 34: D511-D516/   DOI   Ndsl View Article
3 Jaiswal, P., J. Ni, I. Yap, D. Ware, W. Spooner, K. Youens- Clark, L. Ren, C. Liang, W. Zhao, K. Ratnapu, B. Faga, P. Canaran, M. Fogleman, C. Hebbard, S. Avraham, S. Schmidt, T. M. Casstevens, E. S. Buckler, L. Stein, and S. McCouch. 2006. Gramene: A bird's eye view of cereal genomes. Nucleic Acids Res. 34: D717-D723/   DOI   Ndsl View Article
4 Kanehisa, M., S. Goto, M. Hattori, K. F. Aoki-Kinoshita, M. Itoh, S. Kawashima, T. Katayama, M. Araki, and M. Hirakawa. 2006. From genomics to chemical genomics: New developments in KEGG. Nucleic Acids Res. 34: D354-D357/   DOI   Ndsl View Article
5 Whetzel, P. L., H. Parkinson, H. C. Causton, L. Fan, J. Fostel, G. Fragoso, L. Game, M. Heiskanen, N. Morrison, P. Rocca-Serra, S. A. Sansone, C. Taylor, J. White, and C. J. Stoeckert Jr. 2006. The MGED Ontology; A resource for semantics-based description of microarray experiments. Bioinformatics [in press]/ View Article
6 Blake, J. A., J. T. Eppig, C. J. Bult, J. A. Kadin, J. E. Richardson, and Mouse Genome Database Group. 2006. The Mouse Genome Database (MGD): Updates and enhancements. Nucleic Acids Res. 34: D562-D567/   DOI   Ndsl View Article
7 Hirschman, J. E., R. Balakrishnan, K. R. Christie, M. C. Costanzo, S. S. Dwight, S. R. Engel, D. G. Fisk, E. L. Hong, M. S. Livstone, R. Nash, J. Park, R. Oughtred, M. Skrzypek, B. Starr, C. L. Theesfeld, J. Williams, R. Andrada, G. Binkley, Q. Dong, C. Lane, S. Miyasato, A. Sethuraman, M. Schroeder, M. K. Thanawala, S. Weng, K. Dolinski, D. Botstein, and J. M. Cherry. 2006. Genome Snapshot: A new resource at the Saccharomyces Genome Database (SGD) presenting an overview of the Saccharomyces cerevisiae genome. Nucleic Acids Res. 34: D442-D445/   DOI   Ndsl View Article
8 Salgado, H., S. Gama-Castro, M. Peralta-Gil, E. Diaz-Peredo, F. Sanchez-Solano, A. Santos-Zavaleta, I. Martinez-Flores, V. Jimenez-Jacinto, C. Bonavides-Martinez, J. Segura-Salazar, A. Martinez-Antonio, and J. Collado-Vides. 2006. RegulonDB (version 5.0): Escherichia coli K-12 transcriptional regulatory network, operon organization, and growth conditions. Nucleic Acids Res. 34: D394-D397/   DOI   Ndsl View Article
9 Finn, R. D., J. Mistry, B. Schuster-Bockler, S. Griffiths- Jones, V. Hollich, T. Lassmann, S. Moxon, M. Marshall, A. Khanna, R. Durbin, S. R. Eddy, E. L. Sonnhammer, and A. Bateman. 2006. Pfam: Clans, Web tools and services. Nucleic Acids Res. 34: D247-D251/   DOI   Ndsl View Article
10 Lee, D. Y., C. Yun, A. Cho, B. K. Hou, S. Park, and S. Y. Lee. 2006. WebCell: A Web-based environment for kinetic modeling and dynamic simulation of cellular networks. Bioinformatics [in press]/ View Article