Review of Soil Structure Quantification from Soil Images |
Chun, Hyen-Chung
(National Academy of Agricultural Science, Rural Development Administration)
Gimenez, Daniel (Department of Environmental Sciences, Rutgers, The State University of New Jersey) Yoon, Sung-Won (National Institute for Agronomic Research) Park, Chan-Won (National Academy of Agricultural Science, Rural Development Administration) Moon, Yong-Hee (National Academy of Agricultural Science, Rural Development Administration) Sonn, Yeon-Kyu (National Academy of Agricultural Science, Rural Development Administration) Hyun, Byung-Keun (National Academy of Agricultural Science, Rural Development Administration) |
1 | Pozdnyakova, L, D. Gimenez, and P.V. Oudemans. 2005. Spatial analysis of cranberry yield at three scales. Agron. J. 97(1):49-57. DOI ScienceOn |
2 | Rachman, A., S. H. Anderson, and C. J. Gantzer. 2005. Computedtomographic measurement of soil macroporosity parameters as affected by stiff-stemmed grass hedges. Soil Sci. Soc. Am. J. 69(5):1609-1616. DOI |
3 | Ringrose-Voase, A.J. and C. Nys. 1990. One-dimensional image analysis of soil structure. II. Interpretation of parameters with respect to four forest soil profiles. J. Soil Sci. 41:513-527. DOI |
4 | Russell, M.B. 1941. Pore-size distribution as a measure of soil structure. Soil Sci. Soc. Am. 6:108-112. |
5 | Serra, J. 1988. Image Analysis and Mathematical Morphology. Vol. 1. Academic press. |
6 | Shannon, C.E. 1948. A mathematical theory of communication. Bell. Syst. Tech. J. 27:379-656. DOI |
7 | Smetten, K.R.J. and N. Collis-George. 1985. Statistical characterization of soil biopores using a soil peel method. Geoderma 36:27-36. DOI ScienceOn |
8 | Splajt, T., G. Ferrier, and L.E. Frostick. 2003. Application of ground penetrating radar in mapping and monitoring landfill sites. Environ. Geol. 44:963-967. DOI ScienceOn |
9 | Taina, I.A., R.J. Heck, and T.R. Elliot. 2008. Application of X-ray computed tomography to soil science: A literature review. Can. J. Soil Sci. 88(1):1-20. DOI ScienceOn |
10 | Wittmus, H.D. and A.P. Mazurak. 1958. Chemical and physical properties of soil aggregates in a Brunizem soil. Soil Science Society of America Proceedings 22:1-5. DOI |
11 | Wong, R.C.K. and R. Wibowo. 2000. Tomographic evaluation of air and water flow patterns in soil column. Geotech. Test. J. 23(4):413-422. DOI ScienceOn |
12 |
Treseder, K.K. and M.F. Allen. 2000. Mycorrhizal fungi have a potential role in soil carbon storage under elevated |
13 | Talukdar, M.S., O. Torsaeter, M.A. Ioannidis, and J.J. Howard. 2002. Stochastic reconstruction, 3D characterization and network modeling of chalk. J. Petrol. Sci. Eng. 35(1-2):1-21. DOI |
14 | Tarquis, A.M., K.J. McInnes, J.R. Keys, A. Saa, M.R. Garcia, and M.C. Diaz. 2006. Multiscaling analysis in a structured clay soil using 2D images, J. Hydrol. 322:236-246. DOI ScienceOn |
15 | Tennekoon, L., M.C. Boufadel, D. Lavallee, and J. Weaver. 2003. Multifractal anisotropic scaling of the hydraulic conductivity. Water Resour. Res. 39(7):1193. |
16 | VandenBygaart, A.J. and R. Protz. 1999. The representative elementary area REA in studies of quantitative soil micromorphology. Geoderma. 89:333-346. DOI ScienceOn |
17 | Moran, C.J. and A.B. McBratney. 1992. Acquisition and analysis of three component digital images of soil pore structure. I. Method. J. Soil Sci. 43:541-549. DOI |
18 | Nunan, N., K. Ritz, M. Rivers, D.S. Feeney, and I.M. Young. 2006. Investigating microbial micro-habitat structure using X-ray computed tomography, Geoderma. 133:398-407. DOI ScienceOn |
19 | Oleschko, K., F. Brambila, F. Aceff, and L.P. Mora. 1997. From fractal analysis along a line to fractals on the plane. Soil Till. Res. 45:389-406. |
20 | Oleschko, K., G. Korvin, A.S. Balankin, R.V. Khachaturov, L. Flores, B. Figueroa, J. Urrutia, and F. Brambila. 2002. Fractal Scattering of Microwaves from Soils. Phys. Rev. Lett. 89(18): 188501 1-4. DOI |
21 | Olson, R., H. Nariya, K. Yokota, Y. Kamio, and E. Gouaux, 1999. Crystal structure of Staphylococcal LukF delineates conformational changes accompanying formation of a transmembrane channel, Nature Struct. Biol. 6:134-140. DOI ScienceOn |
22 | Perfect, E. and B.D. Kay. 1995. Applications of fractals in soil and tillage research: A review. Soil Till. Res. 32(102):1-20. |
23 | Pierret, J., S.O. Prasher, A. Kantzas, and C. Langford. 1999. Threedomensional quantification of macropore networks in undisturbed soil cores. Soil Sci. Soc. Am. J. 63:1530-1543. DOI |
24 | Yelshin, A. 1996. On the possibility of using information entropy as a quantitative description of porous media structural characteristics. J. Membrane Sci. 117:279-289. DOI |
25 | Young, I.M. and J.W. Crawford. 1992. The analysis of fracture profiles of soil using fractal geometry. Aust. J. Soil Res. 30: 291-295. DOI |
26 | Young, I.M., J.W. Crawford, and C. Rappoldt. 2001. New methods and models for characterizing structural heterogeneity of soil. Soil Till. Res. 61:33-45. DOI |
27 | Perret, J.S., S.O. Prasher, and A.R. Kacimov. 2003. Mass fractal dimension of soil macropores using computed tomography: from the box-counting to the cube-counting algorithm. Eur. J. Soil Sci. 53(3):569-579. |
28 | Peth, S., R. Horn, F. Beckmann, T. Donath, J. Fischer, A.J.M. Smucker. 2008. Three-dimensional quantification of intra-aggregate pore-space features using synchrotron-radiation-based microtomography. Soil Sci. Soc. Am. J. 72(4):897-907. DOI ScienceOn |
29 | Pierret A, C.J. Moran, and C. Doussan. 2005. Conventional detection methodology is limiting our ability to understand the roles and functions of fine roots. New Phytol 166:967-980. DOI ScienceOn |
30 | Pohlmann, K., A. Hassan, and J. Chapman. 2000. Description of hydrogeologic heterogeneity and evaluation of radionuclide transport at an underground nuclear test. J. Contam. Hydrol. 44:353-386. DOI |
31 | Posadas, A.N.D., D. Gimenez, M. Bittelli, C.M.P. Vaz, and M. Flury. 2003. Multifractal characterization of soil particle-size distributions. Soil Sci. Soc. Am. J. 65(5):1361-1367. |
32 | Kaluarachchi, J., V. Cvetkovic, and S. Berglund. 2000. Stochastic analysis of oxygen- and nitrate-based biodegradation of hydrocarbons in aquifers. J. Contam. Hydrol. 41:335-365. DOI |
33 | Karlen, D.L. 2002. Structure, plant establishment and. pp 1269- 1275. In: Lal, R. (ed). Encyclopedia of Soil Science. Marcel Dekker, Inc. |
34 | Kay, B.D. A.P. da Silva, and J.A. Baldock. 1997. Sensitivity of soil structure to changes in organic carbon content: Predictions using pedotransfer functions. Can. J. Soil Scl. 77(4):655-667. DOI ScienceOn |
35 | Keith, C.C. and G.D. Buchan. 2002. Porosity and pore size distribution. In: Lal, R. (ed). Encyclopedia of Soil Science. Marcel Dekker, Inc. |
36 | Kirchhof, G. and H. Daniel. 2003. A technique to assess smallscale heterogeneity of chemical properties in soil aggregates. Aust. J. Soil Rres. 41:919-932. DOI ScienceOn |
37 | Liu, H.H. and F.J. Molz. 1997. Multifractal analyses of hydraulic conductivity distributions. Water Resour. Res. 33(11):2483- 2488. DOI ScienceOn |
38 | Kravchenko, A.N. 2008. Stochastic simulations of spatial variability based on multifractal characteristics. Vadose Zone J. 7(2): 521-524. DOI |
39 | Kutilek, M. and D.R. Nielsen. 1994. Soil Hydrology: Geoecology Textbook. Cantena Verlag. Cremlinggen-Destedt, Germany. |
40 | Lin, T.L. and L.W. Hourng. 2005. Determination of applicable local porosity distributions in a powder bed by the maximum entropy method. Adv. Powder Technol. 16(3):231-246. DOI ScienceOn |
41 | Luo, L.F., H. Lin, and P. Halleck. 2008. Quantifying soil structure and preferential flow in intact soil using x-ray computed tomography. Soil Sci. Soc. Am. J. 72(4):1058-1069. DOI |
42 | Masad, E. and B. Muhunthan. 1997. Three-dimensional characterization and simulation of anisotropic soil fabric. J. Geotech. And Geoenvir. Engrg. 126(3):199-207. |
43 | McBratney, A.B., C.J. Moran, J.B. Stewart, S.R. Cattle, and A.J. Koppi. 1992. Modifications to a method of rapid assessment of soil macropore structure by image analysis. Geoderma. 53: 255-274. DOI ScienceOn |
44 | Monga, O., M. Bousso, P. Garnier, and V. Pot. 2008. 3D geometric structures and biological activity: Application to microbial soil organic matter decomposition in pore space. Ecol. Model. 216(3-4):291-302. DOI ScienceOn |
45 | Bentz, D.P. and N.S. Martys. 1994. Hydraulic radius and transport in reconstructed model three-dimensional porous media. Transport Porous Med. 17:221-238. DOI ScienceOn |
46 | Holden, N.M. 1995. Temporal variation in ped shape in an old pasture soil. Catena. 24:1-11. DOI ScienceOn |
47 | Horgan, G.W. 1998. Mathematical morphology of analyzing soil structure from images. Eur. J. Soil Sci. 49:161-173. DOI ScienceOn |
48 | Huisman, J.A., J.J.J.C. Snepvangers, W. Bouten, and G.B.M. Heuvelink. 2002. Mapping spatial variation in surface soil water content: comparison of ground-penetrating radar and time domain reflectometry. J. Hydrol. 269:194-207. DOI |
49 | Biswal, B, C. Manwart, and R. Hilfer. 1998. Three-dimensional local porosity analysis of porous media. Physica A. 255 (3-4): 221-241. DOI |
50 | Boger, F., J. Feder, T. Jossang, and R. Hilfer. 1992. Microstructural sensitivity of local porosity distributions. Physica A. 187:55-70. DOI |
51 | Boix-Fayos, C., A. Calvo-Cases, A.C. Imeson, and M.D. Soriano- Soto. 2001. Influence of soil properties on the aggregation of some Mediterranean soils and the use of aggregate size and stability as land degradation indicators. Catena. 44:47-67. DOI ScienceOn |
52 | Brady, N.C. and R.R. Weil. 2000. The nature and properties of soils. 12th edition. Prentice Hall. Upper Saddle River, New Jersey. |
53 | Capowiez, Y., P. Renault, and L. Belzunces, 2001. Three-dimensional trajectories of 60Co-labelled earthworms in artificial cores of soil. Eur. J. Soil Sci. 52:365-375. DOI ScienceOn |
54 | Capowiez, Y., A. Pierret, and C.J. Moran. 2003. Characterisation of the three dimensional structure of earthworm burrow systems using image analysis and mathematical morphology. Biol. Fertil. Soils 38:301-310. DOI ScienceOn |
55 | Chatzis, I. and F.A.L. Dullien, 1975. Modelling pore structure by 2-D and 3-D networks with application to sandstones, J. Can. Pet. Technol. 16(1):97-108. |
56 | Dathe, A., S. Eins, J. Niemeyer, and G. Gerold. 2001. The surface fractal dimension of the soil-pore interface as measured by image analysis. Geoderma, 103:203-229. DOI |
57 | Chun, H.C., D. Gimenez, and S.W. Yoon. 2008. Morphology, lacunarity and entropy of intra-aggregate pores: Aggregate size and soil management effects. Geoderma. 146(1-2):83-93. DOI ScienceOn |
58 | Cıslerova, M. and J. Votrabova. 2002. CT derived porosity distribution and flow domains. J. Hydrol. 267:186-200. DOI ScienceOn |
59 | Crawford, J.W., R. Karl, and I.M. Young. 1993. Quantification of fungal morphology, gaseous transport and microbial dynamics in soil: an integrated framework utilizing fractal geometry. Geoderma. 56:157-172. DOI ScienceOn |
60 | Dexter, A.R. 1976. Internal structure of tilled soil. J. Soil Sci. 27:267-278. DOI |
61 | Gouyet, J.G. 1996. Physics and Fractal Structures. Springer, New York. |
62 | Bartoli, F., V. Genevois-Gomendy, V. Royer, S. Niquet, H. Vivier, and R. Grayson. 2005. A multiscale study of silty soil structure. Eur. J. Soil Sci. 56(2):207-223. DOI ScienceOn |
63 | Andraud, C., A. Beghdadi, and J. Lafait. 1994. Entropic analysis of random morphologies. Physica A. 207:208-212. DOI ScienceOn |
64 | Andraud, C., A. Beghdadi, E. Haslund, J. Lafait, and B. Virgin. 1997. Local entropy characterization of correlated random microstructures. Physica A. 235:307-318. DOI |
65 | Bastardie. F, Y. Capowiez, J.R. de Dreuzy, and D. Cluzeau. 2003. X-ray tomographic and hydraulic characterization of burrowing by three earthworm species in repacked soil cores. Appl. Soil Ecol. 24(1):3-16. DOI ScienceOn |
66 | Bear, Jacob. 1974. Dynamics of fluids in porous media. Dover Publications, Inc., New York. |
67 | Beghdadi, A., C. Andraud, J. Lafait, J. Peiro, and M. Perreau. 1993. Entropic and multifractal analysis of disordered morphologies. Fractals 1:671-679. DOI |
68 | Dexter, A.R. and I. Hakansson. 1989. Internal micro-structure of soil clods measured by fracture surface analysis. Swed. J. Agr. Res. 19:77-83. |
69 | Dexter, A.R. 1985. Shapes of aggregates from tilled layers of some dutch and Australian soils. Geoderma. 35:91-107. DOI ScienceOn |
70 | Dexter, A.R. 1988. Advances in characterization of soil structure. Soil Till. Res. 11:199-238. DOI ScienceOn |
71 | Dexter, A.R. 2002. Soil structure: the key to soil function. pp 57-70. In: Pagliai, M. and R. Jones (eds). Sustainable Land Management-Environmental Protection, A Soil Physical Approach. IUSS. |
72 | Edwards, W.M., M.J. Shipitalo, and L. D. Norton. 1988. Contribution of macroporosity to infiltration into a continuous corn notilled watershed: implications for contaminant movement. J. Contam. Hydrol. 3:193-205. DOI ScienceOn |
73 | Edwards, W.M., M.J. Shipitalo, L.B. Owens, and L. D. Norton. 1990. Effects of lumbricus terrestris L. burrows on hydrology of continuous no-till corn fields. Geoderma. 46:73-84. DOI ScienceOn |
74 | Fara, H.D. and A.E. Scheidegger. 1961. Statistical geometry of porous media. J. Geophys. Res. 66(10):3279-3285. DOI |
75 | Fatt, I. 1956. The network model of porous media, I: Capillary pressure characterizations. Trans. AIME. 207:144. |
76 | Gibson, J.R., H. Lin, and M.A. Burns. 2006. A comparison of fractal analytical methods on 2- and 3-dimensional computed tomographic scans of soil aggregates. Geoderma. 134:335-348. DOI |
77 | Gimenez, D., J. Karmon, A. Posadas, and R. Shaw. 2002. Fractal dimensions of mass estimated from intact and eroded soil aggregates. Soil Till. Res. 64:165-172. DOI |
![]() |