Molecular Cloning, Expression Analysis and Enzymatic Characterization of Elastase-like Serine Protease from the Olive Flounder (Paralichthys olivaceus)
|
|
Han, Jin-Wook
(Pukyong National University)
Seo, Jung-Soo (National Fisheries Research and Development Institute) Ahn, Sang-Jung (National Fisheries Research and Development Institute) Lee, Jin-Young (Pukyong National University) Park, Ju-Hyeon (Pukyong National University) Kim, Na-Young (National Fisheries Research and Development Institute) Kim, Moo-Sang (Dongseo University) Hwang, Jee-Youn (National Fisheries Research and Development Institute) Chung, Joon-Ki (Pukyong National University) Lee, Hyung-Ho (Pukyong National University) |
| 1 | Petersen, T. N.. Brunak, S.. von Heijne, G. and Nielsen, H.(2011). SignalP 4.0: discriminating signal peptides from transmembrane regions. Nature Methods 8, 785-786. DOI ScienceOn |
| 2 | Piao, S.. Song, Y. L.. Kim, J. H.. Park, S. Y.. Park, J. W.. Lee, B. L.. Oh, B. H. and Ha, N. C.(2005). Crystal structure of a clip-domain serine protease and functional roles of the clip domains. The EMBO Journal 24, 4404-4414. DOI ScienceOn |
| 3 | Rawlings, N. D. and Barrett, A. J.(1993). Evolutionary families of peptidases. Biochemical Journal 290, 205-218. |
| 4 | Saitou, N. and Nei, M.(1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Molecular biology and evolution 4, 406-425. |
| 5 | Shimada, S. Yamaguchi, K. Takahashi, M. Ogawa, M.(2002). Pancreatic elastase IIIA and its variants are expressed in pancreatic carcinoma cells. International Journal of Molecular Medicine 10, 299-603. |
| 6 | Thompson, J. D.. Higgins, D.G. and Gibson, T. J.(1994). Clustal W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice. Nucleic Acids Research 22, 4673-4680. DOI ScienceOn |
| 7 | Sonawane, A.. Jyot, J.. During, R.. Ramphal, R.(2006). Neutrophil elastase, an innate immunity effector molecule, represses flagellin transcription in Pseudomonas aeruginosa. Infection and Immunity 74, 6682-6689. DOI |
| 8 | Suzuki, T.. Srivastava, A. S. and Kurokawa, T. (2002). cDNA cloning and phylogenetic analysis of pancreatic serine proteases from Japanese flounder, Paralichthys olivaceus. Comparative Biochemistry and Physiology Part B: Biochemistry and Molecular Biology 131, 63-70. DOI |
| 9 | Tani, T.. Ohsumi, J.. Mita, K.. Takiguchi, Y.(1988). Identification of a novel class of elastase isozyme, human pancreatic elastase III, by cDNA and genomic gene cloning. The Journal of Biological Chemistry 263, 1231-1239. |
| 10 | Wan, H.. Korzh, S.. Li, Z.. Mudumana, S. P. Korzh, V.. Jiang, Y. J.. Lin, S. and Gong, Z.(2006). Analyses of pancreas development by generation of gfp transgenic zebrafish using an exocrine pancreas-specific elastaseA gene promoter. Experimental Cell Research 312, 1526-1539. DOI |
| 11 | Zhang, W. J.. Wei, H.. Frei, B.(2008). Ivermectin inhibits LPS-induced production of inflammatory cytokines and improves LPS-induced survival in mice. Inflammation Research 57, 524-529. DOI |
| 12 | Barrett, A. J. and Kirschke, H.(1981). Cathepsin B, Cathepsin H, and cathepsin L. Methods in Enzymology 80, 535-561. DOI |
| 13 | Barrett, A. J.. Rawlings, N. D. and Woessner, J. F. (1998). Handbook of Proteolytic Enzymes 19, 340-341. London : Academic. |
| 14 | Corripio-Miyar Y.. Bird, S. Tsamopoulos, K.. Secombes, C. J.(2007). Cloning and expression analysis of two pro-inflammatory cytokines, IL-1 beta and IL-8, in haddock (Melanogrammus aeglefinus). Molecular Immunology 44, 1361-1373. DOI |
| 15 | Kraut, J.(1977). Serine protease: structure and mechanism of catalysis. Annual Review of Biochemistry 46, 331-358. DOI ScienceOn |
| 16 | Parry, M. A.. Fernandez-Catalan, C.. Bergner, A.. Huber, R.. Hopfner, K. P.. Schlott, B.. Guhrs, K. H.. Bode, W.(1998). The ternary microplasminstaphylokinase microplasmin complex is a proteinase cofactor substrate complex in action. Nature Structural Biology 5, 917-923. DOI |
| 17 | Perona, J. J. and Craik, C. S.(1995). Structural basis of substrate specificity in the serine proteases. Protein Science 4, 337-360. |
| 18 | Heussen, C. and Dowdle, E. B.(1980). Electrophoretic analysis of plasminogen activators in polyacrylamide gels containing sodium dodecyl sulfate and copolymerized substrates. Analytical Biochemistry 102, 196-202. DOI ScienceOn |
| 19 | Giulietti, A.. Overbergh, L.. Valckx, D.. Decallonne, B.. Bouillon, R. and Mathieu, C.(2001). An overview of real-time quantitative PCR: applications to quantify cytokine gene expression. Methods 25, 386-401. DOI ScienceOn |
| 20 | Hall, T. A. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT.(1999). Nucleic Acids Symposium Series 41, 95-98. |
| 21 | Kumar, S.. Nei, M. Dudley, J. and Tamura, K. (2008). MEGA: a biologist-centric software for evolutionary analysis of DNA and protein sequences. Briefings in Bioinformatics 9, 299-306. DOI ScienceOn |
| 22 | Livak, K. J. and Schmittgen, T. D.(2001). Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method. Methods 25, 402-408. DOI ScienceOn |
| 23 | O'Brien, D. and McVey, J.(1993). Blood coagulation, inflammation, and defense. In: Sim E, editor. The natural immune systems, humoralfactors,, 257-280. NewYork : IRLPress. |
| 24 | Ovaere, P. Lippens, S. Vandenabeele, P. and Declercq, W.(2009). The emerging roles of serine protease cascades in the epidermis. Trends in Biochemical Sciences 34, 453-463. DOI ScienceOn |
| 25 | Powers, J. C.. Asgian, J. L.. Ekici, O. D. and James, J. E.(2002). Irreversible Inhibitors of Serine, Cysteine, and Threonine Proteases. Chemical Reviews 102, 4639-4750. DOI |
| 26 | Proudfoot, N. J. and Brownlee, G. G.(1976). 3' non-coding region sequences in eukaryotic messenger RNA. Nature 263, 211-214. DOI ScienceOn |
| 27 | Piao, S.. Kim, S.. Kim, J. H.. Park, J. W.. Lee, B. L. and Ha, N. C.(2007). Crystal structure of the serine protease domain of prophenoloxidase activating factor-I. The Journal of Biological Chemistry 282, 10783-10791. DOI |
| 28 | Gudmundsdottir, E.. Spilliaert, R.. Yang, Q. Craik, C. S.. Bjarnason, J. B. and Gudmundsdottir, A.(1996). Isolation and characterization of two cDNAs from Atlantic cod encoding two distinct psychrophilic elastases. Comparative Biochemistry and Physiology Part B: Biochemistry and Molecular Biology 113, 795-801. DOI |
 |
Korea Institute of Science and Technology Information
Gwahangno, Yuseong-gu, Daejeon, 305-806, Korea TEL : +82-42-869-1752
Copyright (c) 2009 KISTI. All Rights Reserved. For more information mail to
webmaster
