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http://dx.doi.org/10.13103/JFHS.2019.34.2.135

Comparison of Loop-Mediated Isothermal Amplification and Real-Time PCR for the Rapid Detection of Salmonella Typhimurium, Listeria monocytogenes and Cronobacter sakazakii Artificially Inoculated in Foods  

Kim, Jin-Hee (Department of Food and Nutrition, Kookmin University)
Oh, Se-Wook (Department of Food and Nutrition, Kookmin University)
Publication Information
Journal of Food Hygiene and Safety / v.34, no.2, 2019 , pp. 135-139 More about this Journal
Abstract
The objective of this research was to compare loop-mediated isothermal amplification (LAMP) with real-time polymerase chain reaction (PCR) for the rapid detection of pathogens in foods. In this study, the limits of detection (LODs) for Salmonella Typhimurium, Listeria monocytogenes, and Cronobacter sakazakii were evaluated in various foods. Among 11 samples tested for S. Typhimurium, LAMP and real-time PCR had the same LODs in beef and duck meat whereas real-time PCR was more sensitive than the LAMP in 8 samples. However, S. Typhimurium in chocolate samples was not detected by real-time PCR. The sensitivity of real-time PCR was high in all samples inoculated with L. monocytogenes and C. sakazakii whereas LAMP was more sensitive than real-time PCR in oil-rich foods. Therefore, LAMP can be shown as an easrer, more convenient method, as well as effective analytical method for testing difficult samples when employed in PCR.
Keywords
3M molecular detection system; Validation; Real-time PCR;
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1 Mori Y., Notomi T.: Loop-mediated isothermal amplification (LAMP): a rapid, accurate, and cost-effective diagnostic method for infectious diseases. J. Infect. Chemother., 15, 62-69 (2009).   DOI
2 Bakheit M.A., Torra D., Palomino L.A., Thekisoe O.M., Mbati P.A., Ongerth J., Karanis P.: Sensitive and specific detection of Cryptosporidium species in PCR-negative samples by loop-mediated isothermal DNA amplification and confirmation of generated LAMP products by sequencing. Vet. Parasitol., 158, 11-22 (2008).   DOI
3 Kokkinos P., Ziros P., Bellou M., Vantarakis A.: Loop-mediated isothermal amplification (LAMP) for the detection of Salmonella in food. Food Anal Methods., 7, 512-526 (2014).   DOI
4 Rosman, N., NFK M., ME A., S M.: Inhibitory effect of chocolate components toward lard detection in chocolate using real time PCR. Int. J. Food Prop., 19, 2587-2595 (2016).   DOI
5 Gryson, Nicolas, Koen D., Kathy M.: Influence of cocoa components on the PCR detection of soy lecithin DNA. Eur. Food Res. Technol., 226, 247-254 (2007).   DOI
6 Wang X., Seo D.J., Lee M.H., Choi C.: Comparison of conventional PCR, multiplex PCR, and loop-mediated isothermal amplification assays for rapid detection of Arcobacter species. J. Clin. Microbiol., 52, 557-563 (2014).   DOI
7 Stevens K., Jaykus L.A.: Direct detection of bacterial pathogens in representative dairy products using a combined bacterial concentration-PCR approach. J. Appl. Microbiol., 97, 1115-1122 (2004).   DOI
8 Rodriguez-Lazaro D., Hernandez M., Scortti M., Esteve T., Vazquez-Boland J.A., Pla M.: Quantitative detection of Listeria monocytogenes and Listeria innocua by real-time PCR: assessment of hly, iap, and lin02483 targets and AmpliFluor technology. Appl. Environ. Microbiol., 70, 1366-1377 (2004).   DOI
9 Daum, L.T., William J.B., James C.M., Margaret S.N., Lynn A.C., William B.H., Linda G., Riggins W.S., Sandra M., Ann S.: Real-time PCR detection of Salmonella in suspect foods from a gastroenteritis outbreak in Kerr County. J. Clin. Microbiol., 40, 3050-3052 (2002).   DOI
10 Liu Y., Cai X., Zhang X., Gao Q., Yang X., Zheng Z., Luo M., Huang X.: Real time PCR using TaqMan and SYBR Green for detection of Enterobacter sakazakii in infant formula. J. Microbiol. Methods., 65, 21-31 (2006).   DOI
11 Guy R.A., Payment P., Krull U.J., Horgen P.A.: Real-time PCR for quantification of Giardia and Cryptosporidium in environmental water samples and sewage. Appl. Environ. Microbiol., 69, 5178-5185 (2003).   DOI
12 Fortes E.D., David J., Koeritzer B., Wiedmann M.: Validation of the 3M molecular detection system for the detection of Listeria in meat, seafood, dairy, and retail environments. J. Food Prot., 76, 874-878 (2013).   DOI
13 Bird P., Flannery J., Crowley E., Agin J.R., Goins D.: Evaluation of the $3M^{TM}$ molecular detection assay (MDA) 2-Salmonella for the detection of Salmonella spp. in select Foods and environmental surfaces: Collaborative study, First Action 2016.01. J AOAC Int., 99, 980-997 (2016).   DOI
14 Hu L., Ma L., Zheng S., He X., Wang H., Brown E., Hammack T., Zhang G.: Evaluation of 3M molecular detection system and ansr pathogen detection system for rapid detection of Salmonella from egg products. Poult. Sci., 96, 1410-1418 (2016).   DOI
15 Bergamo G., Timm C.D., Carvalho N.R., Helbig E., Gandra E.A.: Comparison between the 3M MDS(R) method and phenotypic methods to detect Salmonella spp. in foods. LWT - Food Sci. Technol., 97, 693-696 (2018).   DOI
16 Demeke T., Jenkins G.R.: Influence of DNA extraction methods, PCR inhibitors and quantification methods on real-time PCR assay of biotechnology-derived traits. Anal. Bioanal. Chem., 396, 1977-1990 (2010).   DOI
17 Shannon K., Lee D.Y., Trevors J., Beaudette L.: Application of real-time quantitative PCR for the detection of selected bacterial pathogens during municipal wastewater treatment. Sci. Total Environ., 382, 121-129 (2007).   DOI