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http://dx.doi.org/10.9721/KJFST.2018.50.5.480

Association between a non-synonymous single nucleotide polymorphism in the Complement component 9 (C9) gene and meat-quality traits in Berkshire pigs  

Ha, Jeongim (Swine Science and Technology Center, Gyeongnam National University of Science & Technology)
Hwang, Jung Hye (Swine Science and Technology Center, Gyeongnam National University of Science & Technology)
Yu, Go Eun (Swine Science and Technology Center, Gyeongnam National University of Science & Technology)
Park, Da Hye (Swine Science and Technology Center, Gyeongnam National University of Science & Technology)
Kang, Deok Gyeong (Swine Science and Technology Center, Gyeongnam National University of Science & Technology)
Kim, Tae Wan (Swine Science and Technology Center, Gyeongnam National University of Science & Technology)
Park, Hwa Chun (Dasan Pig Breeding Co.)
An, Sang Mi (Swine Science and Technology Center, Gyeongnam National University of Science & Technology)
Kim, Chul Wook (Swine Science and Technology Center, Gyeongnam National University of Science & Technology)
Publication Information
Korean Journal of Food Science and Technology / v.50, no.5, 2018 , pp. 480-485 More about this Journal
Abstract
In this study, to identify single nucleotide polymorphisms (SNPs) associated with meat quality in Berkshire pigs, we performed RNA sequencing. A non-synonymous SNP (nsSNP) in the Complement component 9 (C9) gene was identified, and the association between meat quality traits and the C9 genotype was analyzed. The nsSNP in the C9 gene was located at c.942 G>T. In the dominant model, significant associations were observed between the SNP and meat quality traits such as CIE L, collagen content, moisture level, and $pH_{24h}$, whereas in the co-dominant model, significant associations were observed between the SNP and CIE L, collagen content, and protein content. In the recessive model, a significant association between the C9 genotype and the collagen content was observed. In addition, we identified the significant relationship between the C9 genotype and meat quality according to sex. These results indicate that the C9 SNP can be used as a genetic marker for improving pork quality.
Keywords
berkshire; $pH_{24h}$; meat quality; C9; nsSNP;
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