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http://dx.doi.org/10.5010/JPB.2015.42.1.60

Simultaneous estimation of fatty acids contents from soybean seeds using fourier transform infrared spectroscopy and gas chromatography by multivariate analysis  

Ahn, Myung Suk (Plant systems Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB))
Ji, Eun Yee (Plant systems Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB))
Song, Seung Yeob (Faculty of Biotechnology, Jeju National University)
Ahn, Joon Woo (Advanced Radiation Technology Institute, Korea Atomic Energy Research Institute (KAERI))
Jeong, Won Joong (Plant systems Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB))
Min, Sung Ran (Plant systems Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB))
Kim, Suk Weon (Microbiological Resource Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB))
Publication Information
Journal of Plant Biotechnology / v.42, no.1, 2015 , pp. 60-70 More about this Journal
Abstract
The aim of this study was to investigate whether fourier transform infrared (FT-IR) spectroscopy can be applied to simultaneous determination of fatty acids contents in different soybean cultivars. Total 153 lines of soybean (Glycine max Merrill) were examined by FT-IR spectroscopy. Quantification of fatty acids from the soybean lines was confirmed by quantitative gas chromatography (GC) analysis. The quantitative spectral variation among different soybean lines was observed in the amide bond region ($1,700{\sim}1,500cm^{-1}$), phosphodiester groups ($1,500{\sim}1,300cm^{-1}$) and sugar region ($1,200{\sim}1,000cm^{-1}$) of FT-IR spectra. The quantitative prediction modeling of 5 individual fatty acids contents (palmitic acid, stearic acid, oleic acid, linoleic acid, linolenic acid) from soybean lines were established using partial least square regression algorithm from FT-IR spectra. In cross validation, there were high correlations ($R^2{\geq}0.97$) between predicted content of 5 individual fatty acids by PLS regression modeling from FT-IR spectra and measured content by GC. In external validation, palmitic acid ($R^2=0.8002$), oleic acid ($R^2=0.8909$) and linoleic acid ($R^2=0.815$) were predicted with good accuracy, while prediction for stearic acid ($R^2=0.4598$), linolenic acid ($R^2=0.6868$) had relatively lower accuracy. These results clearly show that FT-IR spectra combined with multivariate analysis can be used to accurately predict fatty acids contents in soybean lines. Therefore, we suggest that the PLS prediction system for fatty acid contents using FT-IR analysis could be applied as a rapid and high throughput screening tool for the breeding for modified Fatty acid composition in soybean and contribute to accelerating the conventional breeding.
Keywords
FT-IR (Fourier transform infrared spectroscopy); GC (Gas-chromatography); PCA (principal component analysis); PLS-DA (partial least square - discriminant analysis); RMSEP(root mean square error of prediction); $R^2$ (correlation coefficient);
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