Structural and expression analysis of glutelin genes in Oryza sativa L.
![]() |
Yoon, Ung-Han
(Genomics Division, National Academy of Agricultural Science, RDA)
Kim, Chang-Kug (Genomics Division, National Academy of Agricultural Science, RDA) Lee, Gang-Seob (Genomics Division, National Academy of Agricultural Science, RDA) Hahn, Jang-Ho (Genomics Division, National Academy of Agricultural Science, RDA) Lee, Jeong-Hwa (Genomics Division, National Academy of Agricultural Science, RDA) Kim, Yeon-Ki (Bioscience and Bioinformatics Division, MyongJi University) Ji, Hyeon-So (Genomics Division, National Academy of Agricultural Science, RDA) Mun, Jeong-Hwan (Genomics Division, National Academy of Agricultural Science, RDA) Lee, Tae-Ho (Bioscience and Bioinformatics Division, MyongJi University) Kim, Tae-Ho (Genomics Division, National Academy of Agricultural Science, RDA) |
1 | Tanaka K, Sugimoto T, Ogawa M, Kasi Z. (1980) Isolation and characterization of two types of protein bodies in the rice endosperm. Agric. Biol. Chem 44:1633-39 DOI |
2 | Wakasa Y, Yang L, Hirose S, Takaiwa F. (2009) Expression of unprocessed glutelin precursor alters polymerization without affecting trafficking and accumulation. J Exp Bot 60: 3503-11 DOI |
3 | Wen TN, Luthe DS. (1985) Biochemical characterization of rice glutelin. Plant Physiol 78:172-77 DOI |
4 | Wu CY, Suzuki A, Washida H, Takaiwa F. (1998) The GCN4 motif in a rice glutelin gene is essential for endosperm-specific gene expression and is activated by Opaque-2 in transgenic rice plants. Plant J 14:673-83 DOI |
5 | Xu JH, Messing J. (2008) Organization of the prolamin gene family provides insight into the evolution of the maize genome and gene duplications in grass species. Proc Natl Acad Sci U S A 105:14330-5 DOI |
6 | Xu JH, Messing J. (2009) Amplification of prolamin storage protein genes in different subfamilies of the Poaceae. Theor Appl Genet 119:1397-412 DOI |
7 | Yoon UH, Lee GS, Lee JS, Hahn JH, Kim CK, Kikuchi S, Satoh K, Kim JA, Lee JH, Lee TH, Kim YH. (2009a) Structural analysis of seed developmental stage ESTs in Oryza sativa L. Korean J of Plant Biotechnology 36:130-136 DOI |
8 | Yoon UH, Lee GS, Kim CK, Lee JS, Hahn JH, Yun DW,, Ji HS, Lee TH, Lee JH, Park SH, Kim GW, Seo MS, Kim YH (2009b) Analysis of germination seed stage expressed sequence tags in Oryza sativa L. Korean J of Plant Biotechnology 36:281-288 DOI |
9 | Yoon UH, Kim YK, Kim CK, Hahn JH, Kim DH, Lee TH, Lee GS, Park SC, Nahm BH (2010) Current status on expression profiling using rice microarray. Korean J of Plant Biotechnology 37: 144-152 과학기술학회마을 DOI |
10 | Ouyang S, Zhu W, Hamilton J, Lin H, Campbell M, Childs K, Thibaud-Nissen F, Malek RL, Lee Y, Zheng L, Orvis J, Haas B, Wortman J, Buell CR. (2007) The TIGR Rice Genome Annotation Resource: improvements and new features. Nucleic Acids Res 35(Database issue):D883-7 DOI |
11 | Paterson AH, Freeling M, Sasaki T. (2008) Grains of knowledge: genomics of model cereals. Genome Res 15:1643-50 |
12 | Qu le Q, Takaiwa F. (2004) Evaluation of tissue specificity and expression strength of rice seed component gene promoters in transgenic rice. Plant Biotechnol J 2:113-25 DOI |
13 | Qu le Q, Xing YP, Liu WX, Xu XP, Song YR. (2008) Expression pattern and activity of six glutelin gene promoters in transgenic rice. J Exp Bot 59:2417-24 DOI |
14 | Shewry PR, Napier JA, Tatham AS. (1995) Seed storage proteins: structures and biosynthesis. Plant Cell 7:945-56 DOI |
15 | Shewry PR, Halford NG. (2002) Cereal seed storage proteins: structures, properties and role in grain utilization. J Exp Bot 53:947-58 DOI |
16 | Takaiwa F, Yamanouchi U, Yoshihara T, Washida H, Tanabe F, Kato A, Yamada K. (1996) Characterization of common cisregulatory elements responsible for the endosperm-specific expression of members of the rice glutelin multigene family. Plant Mol Biol 30:1207-21 DOI |
17 | Takaiwa F, Kikuchi S, Oono K. (1986) The structure of rice storage protein glutelin precursor deduced from cDNA. FEBS Lett 206:33-35 DOI |
18 | Takaiwa F, Kikuchi S, Oono K. (1989) The complete nucleotide sequence of new type cDNA coding for rice storage protein glutelin. Nucleic Acids Res 17:3289 DOI |
19 | Takaiwa F, Oono K, Wing D, Kato A. (1991) Sequence of three members and expression of a new major subfamily of glutelin genes from rice. Plant Mol Biol 17:875-85 DOI |
20 | Katsube-Tanaka T, Duldulao JB, Kimura Y, Iida S, Yamaguchi T, Nakano J, Utsumi S. (2004) The two subfamilies of rice glutelin differ in both primary and higher-order structures. Biochim Biophys Acta 1699:95-102 DOI |
21 | Kawakatsu T, Hirose S, Yasuda H, Takaiwa F. (2010) Reducing rice seed storage protein accumulation leads to changes in nutrient quality and storage organelle formation. Plant Physiol 154:1842-54 DOI |
22 | Kikuchi S, Satoh K, Nagata T, Kawagashira N, Doi K, Kishimoto N, Yazaki J, Ishikawa M, Yamada H, Ooka H, Hotta I, Kojima K, Namiki T, Ohneda E, Yahagi W, Suzuki K, Li CJ, Ohtsuki K, Shishiki T; Foundation of Advancement of International Science Genome Sequencing & Analysis Group, Otomo Y, Murakami K, Iida Y, Sugano S, Fujimura T, Suzuki Y, Tsunoda Y, Kurosaki T, Kodama T, Masuda H, Kobayashi M, Xie Q, Lu M, Narikawa R, Sugiyama A, Mizuno K, Yokomizo S, Niikura J, Ikeda R, Ishibiki J, Kawamata M, Yoshimura A, Miura J, Kusumegi T, Oka M, Ryu R, Ueda M, Matsubara K; RIKEN, Kawai J, Carninci P, Adachi J, Aizawa K, Arakawa T, Fukuda S, Hara A, Hashizume W, Hayatsu N, Imotani K, Ishii Y, Itoh M, Kagawa I, Kondo S, Konno H, Miyazaki A, Osato N, Ota Y, Saito R, Sasaki D, Sato K, Shibata K, Shinagawa A, Shiraki T, Yoshino M, Hayashizaki Y, Yasunishi A. (2003) Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science 301:376-9 DOI |
23 | Okita TW, Hwang YS, Hnilo J, Kim WT, Aryan AP, Larson R, Krishnan HB. (1989) Structure and expression of the rice glutelin multigene family. J Biol Chem 264:12573-81 |
24 | Kumar S, Nei M, Dudley J, Tamura K. (2008) MEGA: a biologist- centric software for evolutionary analysis of DNA and protein sequences. Brief Bioinform. 9:299-306 DOI |
25 | Liu WX, Liu HL, Chai ZJ, Xu XP, Song YR, Qu le Q. (2010) Evaluation of seed storage-protein gene 5' untranslated regions in enhancing gene expression in transgenic rice seed. Theor Appl Genet 121:1267-74 DOI |
26 | Matsuo T, Kumazawa K, Ishii R, Ishihara K, Hirata H. (1995) Science of the rice plant volume two physiology, Nobunkyo press, Tokyo, pp 1063-97 |
27 | Osborn T. (1924) The vegetable proteins. London, FL: Longmans, Green and Co |
28 | Abe T, Gusti RS, Ono M, Sasahara T. (1996) Variations in glutelin and high molecular weight endosperm proteins among subspecies of rice (Oryza sativa L.) detected by twodimensional gel electrophoresis. Genes Genet Syst 71:63-8 DOI |
29 | Choi H. (2002) Current status and perspectives in varietal improvement of rice cultivars for high-quality and value-added products. Korean J Crop Sci 47:15-32 과학기술학회마을 |
30 | Bewley DJ, Black M. (1985) Seeds, Physiology of development and germination, Plenum press, New York, pp 1-27 |
31 | Duan M, Sun SS. (2005) Profiling the expression of genes controlling rice grain quality. Plant Mol Biol 59:165-78 DOI |
32 | International Rice Genome Sequencing Project. (2005) The mapbased sequence of the rice genome. Nature 436:793-800 DOI |
33 | Jain M, Tyagi AK, Khurana JP. (2008) Genome-wide identification, classification, evolutionary expansion and expression analyses of homeobox genes in rice. FEBS J 275:2845-61 DOI |
![]() |