1 |
Haarman, M. and Knol, J. 2005. Quantitative real-time PCR assays to identify and quantify fecal Bifidobacterium species in infants receiving a prebiotic infant formula. Appl Environ Microbiol 71, 2318-2324.
DOI
ScienceOn
|
2 |
Hamer, H. M., Jonkers, D., Venema, K., Vanhoutvin, S., Troost, F. J. and Brummer, R. J. 2008. Review article: the role of butyrate on colonic function. Aliment Pharmacol Ther 27, 104-119.
|
3 |
Harmsen, H. J., Raangs, G. C., Franks, A. H., Wildeboer-Veloo, A. C. M. and Welling, G. W. 2002. The effect of the probiotic inulin and the probiotic Bifidobacterium longum on the fecal microflora of healthy volunteers measured by FISH and DGGE. Microbiol Ecol Health Dis 14, 211-219.
|
4 |
Holzapfel, W. H., Haberer, P., Snel, J., Schillinger, U. and Veld, H. I. 1998. Overview of gut flora and probiotics. K. Food Microbiol 41, 85-101.
DOI
ScienceOn
|
5 |
Hooper, L. V., Wong, M. H., Thelin, A., Hansson, L., Falk, P. G. and Gordon, J. I. 2001. Molecular analysis of commensal host microbial relationships in the intestine. Science 291, 881-884.
DOI
ScienceOn
|
6 |
Klaenhammer, T., Altermann, E. and Arigoni, F. 2002. Discovering lactic acid bacteria by genomics. Antonie Van Leeuwenhoek 82, 29-58.
DOI
ScienceOn
|
7 |
Kuehl, C., Wood, H., Marsh, T. L., Schmidt, T. M. and Young, V. B. 2005. Colonization of the cecal mucosa by Helicobacter hepaticus impacts the diversity of the indigenous microbiota. Infect Immun 73, 6952-6961.
DOI
ScienceOn
|
8 |
Leitch, E. C. M, Walker, A. W., Duncan, S. H., Holtrop, G. and Flint, H. J. 2007. Selective colonization of insoluble substrates by human faecal bacteria. Environ Microbiol 9, 667-679.
DOI
ScienceOn
|
9 |
Lenoir-Wijnkoop, I., Sanders, M. E., Cabana, M. D., Corthier, G., Rayes, N., Sherman, P. M., Timmerman, H. M., Vaneechoutte, M., Loo, J. V. and Wolvers, D. A. W. 2007. Probiotic and prebiotic influence beyond the intestinal tract. Nutr Rev 65, 469-489.
DOI
ScienceOn
|
10 |
Ley, R., Peter, E., Turnbaugh, J., Klein, S. and Gordon, J. 2006. Microbial ecology: human gut microbes associated with obesity. Nature 444, 1022-1023.
DOI
ScienceOn
|
11 |
Lopez, H. W., Levrat-Verny, M. A., Coudray, C., Besson, C., Krespine, V., Messager, A., Demigne, C. and Remesy, C. 2001. Class 2 resistant starches lower plasma and liver lipids and improve mineral retention in rats. J Nutr 131, 1283-1289.
|
12 |
Mallon, P., McKay, D., Kirk, S. and Gardiner, K. 2007. Probiotics for induction of remission in ulcerative colitis. Cochrane Database Syst Rev 4, CD005573.
|
13 |
Martin, F., Wang, E. Y., Dumas, M., Yap, I. K. S., Cloarec, O., Bergonzelli, G. E., Theulaz, I., Kochhar, S., Holmes, E., Lindon, J. C., Collinsand, S. M. and Nicholson, J. K. 2006. Transgenomic metabolic interactions in a mouse disease model: Interactions of Trichinella spiralis infection with dietary Lactobacillus paracasei supplementation. J Proteome Res 5, 2185-2193.
DOI
ScienceOn
|
14 |
Martina, R., Langaa, S., Reviriegoa, C., Jimeneza, E., Marina, M. L., Olivaresb, M., Bozab, J., Jimenezb, J., Fernandeza, L., Xausb, J. and Rodrigueza, J. M. 2004. The commensal microflora of human milk: new perspectives for food bacteriotherapy and probiotics. Trends Food Sci Technol 15, 121-127.
DOI
ScienceOn
|
15 |
Matto, J., Malinen, E., Suihko, M. L., Alander, M., Palva, A. and Saarela, M. 2004. Genetic heterogeneity and functional properties of intestinal Bifidobacteria. J Appl Microbiol 97, 459-470.
DOI
ScienceOn
|
16 |
Morrison, D. J., Mackay, W. G., Edwards, C. A., Preston, T., Dodson, B. and Weaver, L. T. 2006. Butyrate production from oligofructose fermentation by the human faecal flora: what is the contribution of extracellular acetate and lactate?. J Nutr 96, 570-577.
|
17 |
Okazaki, Y., Sitanggang, N. V., Sato, S., Ohnishi, N., Inoue, J., Iguchi, T., Watanabe, T., Tomotake, H., Harada, K. and Kato, N. 2013. Burdock fermented by Aspergillus awamori elevates cecal Bifidobacterium, and reduces fecal deoxycholic acid and adipose tissue weight in rats fed a high-fat diet. Biosci Biotechnol Biochem 77, 53-57.
DOI
ScienceOn
|
18 |
Ott, S., Musfeldt, M., Wenderoth, D. F., Hampe, J., Brant, O., Folsch, U. R., Timmis, K. N. and Schreiber, S. 2004. Reduction in diversity of the colonic mucosa associated bacterial microflora in patients with active inflammatory bowel disease. Gut 53, 685-693.
DOI
|
19 |
O’Mahony, L., McCarthy, J., Kelly, P., Hurley, G., Luo, F., Chen, K., O’Sullivan, G. C., Kiely, B., Collins, J. K., Shanahan, F. and Quigley, E. M. M. 2005. Lactobacillus and Bifidobacterium in irritable bowel syndrome: symptom responses and relationship to cytokine profiles. Gastroenterology 128, 541-551.
DOI
ScienceOn
|
20 |
Osborn, D. A. and Sinn, J. K. 2007. Probiotics in infants for prevention of allergic disease and food hypersensitivity. Cochrane Database Syst Rev 4, CD006475.
|
21 |
Qin, J, Raes, R., Arumugam, J., Burgdorf, M. K. S., Manichanh, C., Nielsen, T., Pons, N., Levenez, F., Yamada, T., Mende, D., Li, J., Xu, J., Li, S., Li, D., Cao, J., Wang, B., Liang, H., Zheng, H., Xie, Y., Tap, J., Lepage, P., Bertalan, M., Batto, J., Hansen, T., Paslier, D., Linneberg, A., Nielsen, H. B., Pelletier, E., Renault, P., Ponten, T., Turner, K., Zhu, H., Yu, C., Li, S., Jian, M., Zhou, Y., Li, Y., Zhang, X., Li, S., Qin, N., Yang, H., Wang, J., Brunak, S., Dore, J., Guarner, F., Kristiansen, K., Pedersen, O., Parkhill, J., Weissenbach, J., Consortium, M., Bork, P., Ehrlich, S. and Wang, J. 2010. A human gut microbial gene catalogue established by metagenomic sequencing. Nature 464, 59-65.
DOI
ScienceOn
|
22 |
Ramnani, P., Gaudier, E., Bingham, M., van Bruggen, P., Tuoh, K. M. and Gibson, G. R. 2010. Prebiotic effect of fruit and vegetable shots containing Jerusalem artichoke inulin: a human intervention study. J Nutr 104, 233-240.
DOI
ScienceOn
|
23 |
Reid, G., Jass, J., Sebulsky, M. T. and McCormick, J. K. 2003. Potential uses of probiotics in clinical practice. Clin Microbiol 16, 658-672.
DOI
ScienceOn
|
24 |
Sakakibara, S., Yamauchi, T., Oshima, Y., Tsukamoto, Y. and Kadowaki, T. 2006. Acetic acid activates hepatic AMPK and reduces hyperglycemia in diabetic KK-A(y) mice. Biochem Biophyl Res Commun 344, 597-604.
DOI
ScienceOn
|
25 |
Shanahan, F. 2010. Probiotics in perspective. Gastroenterology 139, 1808-1812.
DOI
ScienceOn
|
26 |
Salminen, S., Bouley, C., Boutron-Ruault, M. C., Cummings, J. H., Franck, A., Gibson, G. R., Isolauri, E., Moreau, M. C., Roberfroid, M. and Rowland, I. 1998. Functional food science and gastrointestinal physiologyand function. J Nutr 80, 147-171.
DOI
ScienceOn
|
27 |
Samuel, B. S., Shaito, A., Motoike, T., Rey, F. E., Backhed, F., Manchester, J. K., Hammer, R. E., Williams, S. C., Crowley, J., Yanagisawa, M. and Gordon, J. I. 2008. Effects of the gut microbiota on host adiposity are modulated by the short-chain fatty-acid binding G protein-coupled receptor, Gpr41. Proc Natl Acad Sci USA 105, 16767-16772.
DOI
ScienceOn
|
28 |
Sanz, Y., Santacruz, A. and De Palma, G. 2008. Insights into the roles of gut microbes in obesity. Interdiscip Perspect Infect Dis 2008, 829101.
|
29 |
Sprunt, K. and Leidy, G. 1988. The use of bacterial interference to prevent infection. Can J Microbiol 34, 332-338
DOI
ScienceOn
|
30 |
Stappenbeck, T. S., Hooper, L. V. and Gordon, J. I. 2002. Developmental regulation of intestinal angiogenesis by indigenous microbes via Paneth cells. Proc Natl Acad Sci USA 99, 15451-15455.
DOI
ScienceOn
|
31 |
Stebbings, S., Munro, K., Simon, M. A., Tannock, G., Highton, J., Harmsen, H., Welling, G., Seksik, P., Dore, J., Grame, G. and Tilsala-Timisjarvi, A. 2002. Comparison of the faecal microflora of patients with ankylosing spondylitis and controls using molecular methods of analysis. Rheumatology 41, 1395-13401.
DOI
ScienceOn
|
32 |
Tannock, G. W. 1997. Probiotic properties of lactic-acid bacteria: plenty of scope for fundamental R&D. Trends Biotechnol 15, 270-274
DOI
ScienceOn
|
33 |
Tannok, G., Munro, K., Harmsen, H. J. M., Welling, G. W., Smart, J. and Gopal, P. K. 2000. Analysis of the fecal microflora of human subjects consuming a probiotic product contacting Lactobacilus rhamnosus DR20. Appl Enviton Microbiol 66, 2578-2588.
DOI
|
34 |
Arumugam, M., Raes, J., Pelletier, E., Paslier, D. L., Yamada, T., Mende, D. R., Fernandes, G. R., Tap, J., Bruls, T., Batto, J. M., Bertalan, M., Borruel, N., Casellas, F., Fernandez, L., Gautier, L., Hansen, T., Hattori, M., Hayashi, T., Kleerebezem, M., Kurokawa, K., Leclerc, M., Levenez, F., Manichanh, C., Bjorn, H., Nielsen, T., Pons, N., Poulain, J., Qin, J., Ponten, T. S., Tims, S., Torrents, D., Ugarte, E., Zoetendal, E.G., Wang, J., Guarner, F., Pedersen, O., Vos, W. M. D., Brunak, S., Dore, J. and Consortium, M. 2011. Enterotypes of the human gut microbiome. Nature 473, 174-180.
DOI
ScienceOn
|
35 |
Turnbaugh, P. J., Ley, R. E., Hamady, M., Fraser-Liggett, C. M., Knight, E. and Gordon, J. I. 2007. The human microbiome project. Nature 449, 804-810.
DOI
ScienceOn
|
36 |
Wolever, T. M. S., Spadafora, P. J., Cunnane, S. C. and Pencharz, P. B. 1995. Propionate inhibits incorporation of colonic [1, 2-13C] acetate into plasma lipids in humans. Am J Clin Nutr 61, 1241-1247.
|
37 |
Zhou, J., Xia, B., Treves, S. D., Wu, L. Y., Marsh, T. L., O'Neill, R. V., Palumbo, A. V. and Tiedje, J. M. 2002. Spatial and resource factors influencing high microbial diversity in soil. Appl Environ Microbiol 68, 326-334.
DOI
ScienceOn
|
38 |
Ackhed, F. B, Manchester, J. K., Semenkovich, C. F. and Gordon, J. I. 2007. Mechanisms underlying the resistance to diet induced obesity in germ-free mice. Proc Natl Acad Sci USA 104, 979-984.
DOI
ScienceOn
|
39 |
Allen, S. J., Martinez, E. G., Gregorio, G. V. and Dans, L. F. 2010. Probiotics for treating acute infectious diarrhoea. Cochrane Database Syst Rev 11, CD003048.
|
40 |
Backhed, F., Ding, H., Wang, T., Hooper, L. V., Koh, G. Y., Nagy, A., Semenkovich, C. F., Gordon, J. I. and Affiliations, A. 2004. The gut microbiota as an environmental factor that regulates fat storage. Proc Natl Acad Sci USA 101, 15718-15723.
DOI
ScienceOn
|
41 |
Backhed, F., Ley, R. E., Sonnenburg, J. L., Peterson, D. A. and Gordon, J. I. 2005. Host-bacterial mutualism in the human intestine. Science 307, 1915-1920.
DOI
ScienceOn
|
42 |
Bajzer, M. and Randy, J. S. 2006. Physiology: Obesity and gut flora. Nature 444, 1009-1010.
DOI
ScienceOn
|
43 |
Belenguer, A., Duncan, A. S. H., Calder, G., Holtrop, G., Louos, P., Lobley, G. E. and Flint, H. J. 2006. Two routes of metabolic cross-feeding between Bifidobacterium adolescentis and butyrate-producing anaerobes from the human gut. Appl Environ Microbiol 72, 3593-3599.
DOI
ScienceOn
|
44 |
Brigidi, P., Vitali, B., Swennen, E., Bazzocchi, G. and Matteuzzi, D. 2001. Effects of probiotic administration upon the composition and enzymatic activity of human fecal microbiota in patients with irritable bowel syndrome or functional diarrhea. Res Microbial 152, 735-741.
DOI
ScienceOn
|
45 |
Dave, M., Peter, D., Middhac, S. and Rioux, K. P. 2012. The human gut microbiome: current knowledge, challenges, and future directions. Transl Res 160, 246-257.
DOI
ScienceOn
|
46 |
Delzenne, N. M. and Kok, N. 2001. Effects of fructans-type prebiotics on lipid metabolism. Am J Clin Nutr 73, 456-458.
|
47 |
Delzenne, N. M., Cani, P. D. and Neyrinck, A. M. 2007. Modulation of glucagon-like peptide 1 and energy metabolism by inulin and oligofructose: experimental data. J Nutr 137, 2547-2551.
|
48 |
Delzenne, N. M., Neyrinck, M. A., Backhed, F. and Cani, P. D. 2011. Targeting gut microbiota in obesity: effects of prebiotics and probiotics. Nat Rev Endocrinol 7, 639-646.
DOI
ScienceOn
|
49 |
DiBaise, J. K., Zhang, H., Crowell, M. D., Brown, R. K., Decker, G. A. and Rittmann, B. E. 2008. Gut microbiota and its possible relationship with obesity. Mayo Clin Proc 83, 460-469.
DOI
ScienceOn
|
50 |
Deshpande, G., Rao, S., Patole, S. and Bulsara, M. 2010. Updated meta-analysis of probiotics for preventing necrotizing enterocolitis in preterm neonates. Pediatrics 125, 921-930.
DOI
|
51 |
Eckburg, P. E., Bernstein, C. N., Purdom, E., Dethlefsen, L., Sargent, M., Gill, S. R., Nelson, K. E. and Relman, D. A. 2005. Diversity of the human intestinal microbial flora. Science 308, 1635-1638.
DOI
ScienceOn
|
52 |
Filippo, D. C., Cavalieria, D., Paolab, M. D., Ramazzottic, M., Poulletd, J. B., Massartd, S., Collinib, S., Pieraccinie, G. and Lionettib, P. 2010. Impact of diet in shaping gut microbiota revealed by a comparative study in children from Europe and rural Africa. Proc Natl Acad Sci USA 107, 14691-14696.
DOI
ScienceOn
|
53 |
Finegold, S., Molitoris, M. D., Song, Y., Liu, C., Vaisanen, M. L., Bolte, E., McTeague, M., Sandler, R., Wexler, H., Marlowe, E. M., Collins, M. D., Lawson, P. A., Summanen, P., Baysallar, M., Tomzynski, T. J., Read, E., Johnson, E., Rolfe, R., Nasir, P., Shah, H., Haake, D. A., Manning, P. and Kaul, A. 2002. Gastrointestinal microflora studies in late-onset autism. Clin Infect Dis 35, 6-16.
|
54 |
Floch, M. H., Madsen, K. K. and Jenkins, D. J. 2006. Recommendations for probiotic use. J Clin Gastroenterol 40, 275-278.
DOI
ScienceOn
|
55 |
Gibson, G. R., Probert, H. M., Rastall, R. A. and Roberfroid, M. R. 2004. Dietary modulation of the human colonic microbiota: updating the concept of prebiotics. Nutr Res Rev 17, 259-275.
DOI
ScienceOn
|
56 |
Guarner, F., Khan, A. G., Garisch, J., Eliakim, E., Gangl, A. Thomson, A., Krabshuis, J., Lemair, T., outside experts, I., Kaufmann, P., de Paula, J. A., Fedorak, R., Shanahan, F., Sanders, M. E., zajewska, H., Ramakrishna, B. S. and Karakan, T. 2011. Probiotics and prebiotics. World Gastroenterology Organisation.
|