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http://dx.doi.org/10.5352/JLS.2009.19.5.684

Genetic Diversity of Xanthomonas arboricola pv. pruni Isolated in Korea  

Park, So-Yeon (Dept. of Biology, Sunchon National University)
Lee, Young-Sun (Dept. of Biology, Sunchon National University)
Shin, Jong-Sub (Suncheon-si Agricultural Technology and Extension Center)
Koh, Young-Jin (Dept. of Plant Medicine, Sunchon National University)
Jung, Jae-Sung (Dept. of Biology, Sunchon National University)
Publication Information
Journal of Life Science / v.19, no.5, 2009 , pp. 684-687 More about this Journal
Abstract
Xanthomonas arboricola pv. pruni, the causal agent of bacterial shot holes in stone fruits, was known to have a low population diversity. To investigate the genetic characteristics of X. arboricola pv. pruni isolated in Korea, three strains which have identical 16S rDNA sequences - including type strain (LMG852), Japanese isolate (MAFF301420) and Korean isolate (XWD1) - were analysed based on the nucleotide sequences of three DNA regions and RAPD pattern. No sequence diversity among the three strains was found within the ITS, glnA and atpD gene sequences. However, five of 756 nucleotides of the atpD gene determined (accession number FJ429319) were different from those of the French strain available from the Genbank database. RAPD analyses performed with 40 different arbitrary primers revealed that two strains isolated from Korea and Japan showed similarity in their band patterns distinguished by type strain. These results suggest that Korean and Japanese strains are very close and belong to a population with a low genetic diversity, and might have a different origin from strains found in West Europe.
Keywords
Xanthomonas arboricola pv. pruni; bacterial shot hole; genetic diversity; RAPD;
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