1 |
Aziz, R. K., Bartels, D., Best, A. A., DeJongh, M., Disz, T., Edwards, R. A., Formsma, K., Gerdes, S., Glass, E. M., Kubal, M., Meyer, F., Olsen, G. J., Olson, R., Osterman, A. L., Overbeek, R. A., McNeil, L. K., Paarmann, D., Paczian, T., Parrello, B., Pusch, G. D., Reich, C., Stevens, R., Vassieva, O., Vonstein, V., Wilke, A. and Zagnitko, O. 2008. The RAST server: rapid annotations using subsystems technology. BMC Genomics 9: 75.
DOI
|
2 |
Clarke-Pearson, M. and Brady, S. F. 2008. Paerucumarin, a new metabolite produced by the pvc gene cluster from Pseudomonas aeruginosa. J. Bacteriol. 190: 6927-6930.
DOI
|
3 |
De Vleesschauwer, D. and Hofte, M. 2003. Using Serratia plymutica to control fungal pathogens of plants. CAB Reviews 2: 189-257.
|
4 |
Ha, W. J., Kim, Y. C., Jung, H. and Park, S. K. 2014. Control of the rootknot nematode (Meloidogyne spp.) on cucumber by a liquid bio-formulation containing chitinolytic bacteria, chitin, and their products. Res. Plant Dis. 20: 112-118. (In Korean)
DOI
|
5 |
Harris, A. K. P., Williamson, N. R., Slater, H., Cox, A., Abbasi, S., Foulds, I., Simonsen, H. T., Leeper, F. J. and Salmond, G. P. C. 2004. The Serratia gene cluster encoding biosynthesis of the red antibiotic, prodigiosin, shows species-and strain-dependent genome context variation. Microbiology 150: 3547-3560.
DOI
|
6 |
Han, S. H., Kang, B. R., Lee, J. H., Kim, H. J., Park, J. Y., Kim, J. J. and Kim, Y. C. 2012. Isolation and characterization of oligotrophic bacteria possessing induced systemic disease resistance against plant pathogens. Plant Pathol. J. 28: 68-74.
DOI
|
7 |
Kim, H. J., Choi, H. S., Yang, S. Y., Kim, I. S., Yamaguchi, T., Sohng, J. K., Park, S. K., Kim, J.-C, Lee, C. H., McSpadden Gardener, B. B. and Kim, Y. C. 2014. Both extracellular chitinase and a new cyclic lipopeptide, chromobactomycin, contribute to the biocontrol activity of Chromobacterium sp. C61. Mol. Plant Pathol. 15: 122-132.
DOI
|
8 |
Kim, H. J., Park, J. Y., Han, S. H., Lee, J. H., Rong, X., McSpadden Gardener, B. B., Park, S. K. and Kim, Y. C. 2011a. Draft genome sequence of the biocontrol bacterium Chromobacterium sp. Strain C-61. J. Bacteriol. 193: 6803-6804.
DOI
|
9 |
Kim, J. C., Choi, G. J., Park, J. H., Kim, H. T. and Cho, K. Y. 2001. Activity against plant pathogenic fungi of phomalactone isolated from Nigrospora sphaerica. Pest Manag. Sci. 57: 554-559.
DOI
|
10 |
Kim, Y. C., Jung, H., Kim, K. Y. and Park, S. K. 2008. An effective biocontrol bioformulation against Phytopathora blight of pepper using growth mixtures of combined chitinolytic bacteria under different field conditions. Eur. J. Plant Pathol. 120: 373-382.
DOI
|
11 |
Kim, Y. C., Lee, J. H., Bae, Y.-S., Sohn, B.-K. and Park, S. K. 2010. Development of effective environmentally-friendly approaches to control Alternaria blight and anthracnose disease of Korean ginseng. Eur. J. Plant Pathol. 127: 443-450.
DOI
|
12 |
Kim, Y. C., Leveau, J., McSpadden Gardener, B. B., Pierson, E. A., Pierson, L. S. and Ryu, C.-M. 2011b. The multifactorial basis for plant health promotion by plant-associated bacteria. Appl. Environ. Microbiol. 77: 15848-1555.
|
13 |
Kimura, M. 1980. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J. Mol. Evol. 16: 111-120.
DOI
|
14 |
Park, J.-K., Lee, S.-H., Lee, J.-H., Han, S., Kang, H., Kim, J.-C., Kim, Y. C. and McSpadden Gardener, B. B. 2013. Sampling and selection factors that enhance the diversity of microbial collections: application to biopesticide development. Plant Pathol. J. 29: 144-153.
DOI
|
15 |
Li, P. Kwok, A. H. Y., Jiang, J., Ran, T., Xu, D. Wang, W. and Leung F. C. 2015. Comparative genome analyses of Serratia marcescens FS14 reveals its high antagonistic potential. PLoS One 10: e0123061.
DOI
|
16 |
McSpadden Gardener, B. B., Kim, I. S., Kim, K. Y. and Kim, Y. C. 2014. Draft genome sequence of a chitinase-producing biocontrol bacterium, Lysobacter antibioticus HS124. Res. Plant Dis. 20: 216-218.
DOI
|
17 |
Overbeek, R., Begley, T., Butler, R. M., Choudhuri, J. V., Chuang, H.-Y., Cohoon, M., de Crecy-Lagard, V., Diaz, N., Disz, T., Edwards, R., Fonstein, M., Frank, E. D., Gerdes, S., Glass, E. M., Goesmann, A., Hanson, A., Iwata-Reuyl, D., Jensen, R., Jamshidi, N., Krause, L., Kubal, M., Larsen, N., Linke, B., McHardy, A. C., Meyer, F., Neuweger, H., Olsen, G., Olson, R., Osterman, A., Portnoy, V., Pusch, G. D., Rodionov, D. A., Ruckert, C., Steiner, J., Stevens, R., Thiele, I., Vassieva, O., Ye, Y., Zagnitko, O. and Vonstein, V. 2005. The subsystems approach to genome annotation and its use in the project to annotate 1000 genomes. Nucleic Acids Research 33: 5691-5702.
DOI
|
18 |
Ugras, S., Sezen, K., Kati, H. and Demibag, Z. 2014. Purification and characterization of an antibacterial substance produced by pest-originated Serratia marcescens Mm3. Turk. J. Biol. 38: 177-184.
DOI
|
19 |
Zerbino, D. R. and E. Birney. 2008. Velvet: algorithms for de novo short read assembly using de Bruijn graphs. Genome Research 18: 821-829.
DOI
|
20 |
Zerbino, D. R., McEwen, G. K., Margulies, E. H. and Birney, E. 2009. Pebble and rock band: heuristic resolution of repeats and scaffolding in the velvet short-read de Novo assembler. PLoS ONE 4: e8407.
DOI
|