The Complete Nucleotide Sequence of a Korean Isolate Bean yellow mosaic virus from Freesia sp. and Comparison to Other Potyviruses |
Choi, Sun-Hee
(Department of Horticulture and Landscape, College of Natural Science, Seoul Women's University)
Yoon, Ju-Yeon (Department of Horticulture and Landscape, College of Natural Science, Seoul Women's University) Ryu, Ki-Hyun (Department of Horticulture and Landscape, College of Natural Science, Seoul Women's University) Choi, Seung-Kook (Virology Unit, Department of Horticultural Environment, National Institute of Horticultural and Herbal Science, Rural Development Administration) |
1 | Wylie, S. J., Kueh, J., Welsh, B., Smith, L. J., Jones, M. G. K. and Jones, R. A. C. 2002. A non-aphid-transmissible isolate of bean yellow mosaic potyvirus has an altered NAG motif in its coat protein. Arch. Virol. 147: 1813-1820. DOI |
2 | Wylie, S. J., Coutts, B. A., Jones, M. G. K. and Jones, R. A. C. 2008. Phylogenetic analysis of Bean yellow mosaic virus isolates from four continents: Relationship between the seven groups found and their hosts and origins. Plant Dis. 92: 1596-1603. DOI ScienceOn |
3 | Wang, L. 2006. Freesia. In: Flower Breeding and Genetics, ed. N. O. Anderson, pp. 665-693. Springer, The Netherlands. |
4 | Parrella, G. and Lanave, C. 2009. Identification of a new pathotype of Bean yellow mosaic virus (BYMV) infecting blue passion flower and some evolutionary characteristics of BYMV. Arch. Virol. 154: 1689-1694. DOI |
5 | Randle, R. W., Davies, C., Gibbs, A. J. and Hatta, T. 1980. Amino acid composition of capsid protein as a taxonomic criterion for classifying the atypical S strain of Bean yellow mosaic virus. Aust. J. Biol. Sci. 33: 243-254. |
6 | Tamura, K., Peterson, D., Peterson, N., Stecher, G., Nei, M. and Kumar, S. 2011. MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol. Biol. Evol. 28: 2731-2739. DOI ScienceOn |
7 | Shukla, D. D., Strike, P. M., Tracy, S. L., Gough, K. H. and Ward, C. W. 1988. The N and C terminal of the coat protein Potyviruses are surface located and the N-terminus contains major virus specific epitopes. J. Gen. Virol. 69: 1497-1508. DOI |
8 | Shukla, D. D., Ward, C. W. and Brunt, A. A. 1994. The Potyviridae. CAB International, UK, 516 pp. |
9 | Takahashi, T., Uyeda, I., Ohshima, K. and Shikata, E. 1990. Nucleotide sequence of the capsid protein gene of Bean yellow mosaic virus chlorotic spot strain. J. Fac. Agr. Hokkaido Univ. 64: 152-163. |
10 | Urcuqui-Inchima, S., Haenni, A. and Bernardi, F. 2001. Potyvirus proteins: a wealth of functions. Virus Res. 74: 157−175. DOI ScienceOn |
11 | Vaira, A. M., Lisa, V., Costantini, A., Masenga, V., Rapetti, S. and Milne, R. G. 2006. Ophioviruses infecting ornamentals and a probable new species associated with a severe disease in freesia. Acta Hort. 722: 191−199. |
12 | Vance, V. B., Moore, D., Turpen, T. H., Bracker, A. and Hollowell, V. C. 1992. The complete nucleotide sequence of pepper mottle virus genomic RNA: comparison of the encoded polyprotein with those of other sequenced potyviruses. Virology 191: 19−30. DOI ScienceOn |
13 | Wada, Y., Iwai, H., Ogawa, Y. and Arai, K. 2000. Comparison of pathogenicity and nucleotide sequences of 30-terminal regions of Bean yellow mosaic virus isolate from gladiolus. J. Gen. Plant Pathol. 66: 345−352. DOI |
14 | Chang, C. A., Hiebert, E. and Purcifull, D. E. 1988b. Purification, characterization, and immunological analysis of nuclear inclusions induced by bean yellow mosaic and clover yellow vein potyviruses. Phytopathology 78: 1266−1275. DOI |
15 | Ganesh-Selvaraj, D. G., Pokorný, R. and Holková, L. 2009. Variability of Bean yellow mosaic virus isolates in the Czech Republic. Acta Virol. 53: 277−280. DOI |
16 | Derks, A. F. L. M., Vink-van den Abeele, J. L. and Muller, P. J. 1980. Bean yellow mosaic virus in some iridaceous plants. Acta Hort. 110: 31−37. |
17 | Dougherty, W. G., Cary, S. M. and Parks, T. D. 1989. Molecular genetic analysis of a plant virus polyprotein cleavage site: a model. Virology 171: 356−364. DOI ScienceOn |
18 | Gal-On, A. 2000. A point mutation in the FRNK motif of the potyvirus helper component-protease gene alters symptom expression in cucurbits and elicits protection against the severe homologous virus. Phytopathology 90: 467−473. DOI ScienceOn |
19 | Guyatt, K. J., Proll, D. F., Menssen, A. and Davidson, A. J. 1996. The complete nucleotide sequence of bean yellow mosaic potyvirus RNA. Arch. Virol. 141: 1231−1246. DOI |
20 | Hammond, J. and Hammon, R. W. 2003. The complete nucleotide sequence of isolate BYMV-GDD of Bean yellow mosaic virus, and comparison to other potyviruses. Arch. Virol. 148: 2461−2470. DOI |
21 | Kumar, Y., Hallan, V. and Zaidi, A. A. 2009. Identification and characterization of Bean yellow mosaic virus infecting freesia. J. Plant Biochem. Biotech. 18: 253−255. DOI |
22 | Lopez-Moya, J. J., Wang, R. Y. and Pirone, T. P. 1999. Context of the coat protein DAG motif affects potyviurs transmissibility by aphids. J. Gen. Virol. 80: 3281−3288. DOI |
23 | Magie, R. O. and Poe, S. L. 1972. Disease and pest associates of bulbs and plants. In: The World of Gladiolus, pp. 155-167. Edgewood Press, USA. |
24 | Chang, C. A., Hiebert, E. and Purcifull, D. E. 1988a. Analysis of in vitro translation of Bean yellow mosaic virus RNA: Inhibition of proteolytic processing by antiserum to the 49K nuclear inclusion protein. J. Gen. Virol. 69: 1117−1122. DOI |
25 | Allison, R., Johnston, R. E. and Dougherty, W. G. 1986. The nucleotide sequence of the coding region of tobacco etch virus genomic RNA: evidence for the synthesis of a single polyprotein. Virology 154: 9−20. DOI ScienceOn |
26 | Bos, L. 1970. Descriptions of Plant Viruses, Bean yellow mosaic virus, CMI/AAB, UK. |
27 | Brunt, A. A. 1995. Virus and Virus-like Diseases of Bulb and Flower Crops. pp. 274-280. John Wiley & Sons, UK. |