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http://dx.doi.org/10.11110/kjpt.2021.51.3.337

The complete chloroplast genome of Limonium tetragonum (Plumbaginaceae) isolated in Korea  

KIM, Yongsung (Honam National Institute of Biological Resources)
XI, Hong (InfoBoss Inc. and InfoBoss Research Center)
PARK, Jongsun (InfoBoss Inc. and InfoBoss Research Center)
Publication Information
Korean Journal of Plant Taxonomy / v.51, no.3, 2021 , pp. 337-344 More about this Journal
Abstract
The chloroplast genome of Limonium tetragonum (Thunb.) Bullock, a halophytic species, was sequenced to understand genetic differences based on its geographical distribution. The cp genome of L. tetragonum was 154,689 bp long (GC ratio is 37.0%) and has four subregions: 84,572 bp of large single-copy (35.3%) and 12,813 bp of small single-copy (31.5%) regions were separated by 28,562 bp of inverted repeat (40.9%) regions. It contained 128 genes (83 protein-coding genes, eight rRNAs, and 37 tRNAs). Thirty-five single-nucleotide polymorphisms and 33 INDEL regions (88 bp in length) were identified. Maximum-likelihood and Bayesian inference phylogenetic trees showed that L. tetragonum formed a sister group with L. aureum, which is incongruent with certain previous studies, including a phylogenetic analysis.
Keywords
Limonium tetragonum; chloroplast genome; phylogenetic analysis; intraspecific variation; Plumbaginaceae;
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