Browse > Article
http://dx.doi.org/10.11110/kjpt.2016.46.2.247

Comparative phylogenetic relationship between wild and cultivated Prunus yedoensis Matsum. (Rosaceae) with regard to Taquet's collection  

Cho, Myong-Suk (Department of Biological Sciences, Sungkyunkwan University)
Kim, Chan-Soo (Warm-Temperate and Subtropical Forest Research Center, Korea Forest Research Institute)
Kim, Seon-Hee (Department of Biological Sciences, Sungkyunkwan University)
Kim, Seung-Chul (Department of Biological Sciences, Sungkyunkwan University)
Publication Information
Korean Journal of Plant Taxonomy / v.46, no.2, 2016 , pp. 247-255 More about this Journal
Abstract
As an attempt to determine the identity of the old trees of flowering cherries planted in the yard of the Catholic Archdiocese of Daegu, we conducted comparative phylogenetic analyses between wild and cultivated Prunus yedoensis Matsum. We generated the phylogeny (MP) and haplotype network (TCS) of 25 individuals, including wild P. yedoensis, from Jeju Island, cultivated P. ${\times}$yedoensis 'Somei-yoshino' from Korea and Japan, and P. spachiana f. ascendens (Makino) Kitam. from Jeju Island and Japan based on highly informative sequences of two cpDNA regions (rpl16 gene and trnS-trnG intergenic spacer). The wild and cultivated P. yedoensis were distinguished from each other in both the phylogeny and haplotype networks, and the old flowering cherry trees in Daegu had a cpDNA haplotype identical to that of the cultivated P. ${\times}$yedoensis 'Someiyoshino'. Compared to the cultivated P. ${\times}$yedoensis 'Somei-yoshino', wild P. yedoensis appears to have greater haplotype diversity, presumably originating from the genetic diversity of P. spachiana f. ascendens that functioned as a maternal parent in the hybrid origin of wild P. yedoensis. A future detailed study requires extensive sampling of P. spachiana f. ascendens from Japan and Korea to determine their precise phylogenetic relationships relative to wild and cultivated P. yedoensis. We concluded that the old flowering cherry trees planted in the yard of the Catholic Archdiocese of Daegu are highly likely to be of cultivated origin rather than wild types from Jeju Island, as previously speculated.
Keywords
ornamental flowering cherries; Prunus yedoensis; cpDNA phylogeny; haplotype network; haplotype diversity;
Citations & Related Records
Times Cited By KSCI : 1  (Citation Analysis)
연도 인용수 순위
1 Kim, C. S. 1998. Distribution and taxonomic study of Prunus yedoensis Matsumura (Rosaceae). Ph. D. Dissertation, Cheju National University, Jeju, Korea. (in Korean)
2 Kim, C. S., K. Y. Lee, M. K. Moon, H. J. Hyun. B. S. Ihm and M. H. Kim. 1998. Natural habitat of Prunus yedoensis Matsumura and its morphological variation. Korean Journal of Plant Taxonomy 28: 117-137. (in Korean)   DOI
3 Koehne, E. 1912. 96. Prunus yedoensis Matsum. var. nudiflora Koehne. Repertorium Specierum Novarum Regni Vegetabilis 10: 507. (in German)   DOI
4 Koidzumi, G. 1932. Prunus yedoensis Matsum. is a native of Quelpaert. Acta Phytotaxonomica et Geobotanica, 1:177-179.
5 Krssmann, G. 1986. Cultivated broad-leaved trees and shrubs. BT Batsford Ltd, London.
6 Lee, T. B. 2003. Coloured Flora of Korea. Hyangmunsa. Seoul. (in Korean)
7 Matsumura, J. 1901. Cerasi Japanicae duae species novae. The Botanical Magazine Tokyo 15: 99-101.   DOI
8 Nakai, T. 1916. Flora Sylvatica Koreana. Vol. 5. Government of Chsen, Forestal Experiment Station, Seoul. (in Japanese)
9 Nakamura, I., H. Takahashi, S. Ohta, T. Moriizumi, Y. Hanashiro, Y. I. Sato and M. Mii. 2015. Origin of Prunus $\times$yedoensis 'Somei-yoshino' based on sequence analysis of PolAI gene. Advances in Horticultural Science 29: 17-23.
10 Ohta, S., S. Osumi, T. Katsuki, I. Nakamura, T. Yamamoto and Y. I. Sato. 2006. Genetic characterization of flowering cherries (Prunus subgenus Cerasus) using rpl16-rpl14 spacer sequences of chloroplast DNA. Journal of the Japanese Society for Horticultural Science 75: 72-78.   DOI
11 Park, M. K. 1965. A historological survey on the Prunus yedoensis in Korea. Korean Journal of Botany 8: 12-15. (in Korean)
12 Park, S. H., M. H. Kim, S. Lee and K. K. Sim. 1984. A palynological study of some Prunus in Mt. Halla. Korean Journal of Plant Taxonomy 14: 153-159. (in Korean)   DOI
13 Roh, M. S., E. J. Cheong, I. Y. Choi and Y. H. Joung. 2007. Characterization of wild Prunus yedoensis analyzed by inter-simple sequence repeat and chloroplast DNA. Scientia Horticulturae 114: 121-128.   DOI
14 Shaw, J., E. B. Lickey, J. T. Beck, S. B. Farmer, W. Liu, J. Miller, K. C. Siripun, C. T. Winder, E. E. Schilling and R. L. Small. 2005. The tortoise and the hare II: Relative utility of 21 noncoding chloroplast DNA sequences for phylogenetic analysis. American Journal of Botany 92: 142-166.   DOI
15 Swofford, D. L. 2002. PAUP*.Phylogenetic analysis using parsimony (*and other methods) version 4.0. Sinauer Associates, Sunderland, MA.
16 Takenaka, Y. 1963. The origin of Yoshino cherry tree. Journal of Heredity 54: 207-211.   DOI
17 Warm-Temperate and Subtropical Forest Research Center. 2015. Investigation report on flowering cherries in Catholic Archdiocese of Daegu: 1-2. (in Korean)
18 Wilson, E. H. 1916. The Cherries of Japan. Univ. Press, Cambridge, MA, USA.
19 Yu T. T. and C. L. Li. 1986. Cerasus. In Flora Reipublicae Popularis Sinicae 38. Yu, T. T. (ed.), Science Press, Beijing. Pp. 1-133. (in Chinese)
20 Bailey, L. H. and E. Z. Bailey. 1976. Prunus L. Hortus Third; A Concise Dictionary of Plants Cultivated in the United States and Canada. Macmillan Publishing Company, New York.
21 Chang, C. S., H. Choi and K. S. Chang. 2004. Reconsideration of Prunus sargentii complex in Korea: With respect to P. sargentii and P. takesimensis. Korean Journal of Plant Taxonomy 34: 221-244. (in Korean)   DOI
22 Chang, K. S., C. S. Chang T. Y. Park and M. S. Roh. 2007. Reconsideration of the Prunus serrulata complex (Rosaceae) and related taxa in eastern Asia. Botanical Journal of the Linnean Society 154: 35-54.   DOI
23 Cheng, S., J. R. Mcbride and K. Fukunar. 2000. The urban forest of Tokyo. Arboricultural Journal 23: 379-392.
24 Cho, M. S., C. S. Kim, S. H. Kim, T. O. Kim, K. I. Heo, J. Jun and S.-C. Kim. 2014. Molecular and morphological data reveal hybrid origin of wild Prunus yedoensis (Rosaceae) from Jeju Island, Korea: Implications for the origin of the flowering cherry. American Journal of Botany 101: 1976-1986.   DOI
25 Clement, M., D. Posada and K. A. Crandall. 2000. TCS: A computer program to estimate gene genealogies. Molecular Ecology 9: 1657-1659.   DOI
26 Felsenstein, J. 1985. Confidence limits on phylogenies: An approach using the bootstrap. Evolution 39: 783-791.   DOI
27 Gray, A. 1856. Manual of the botany of the northern United States, including Virginia, Kentucky, and all east of the Mississippi:arranged according to the natural system. 2nd ed., George P. Putnam & Co., New York.
28 Harn, C., Y. J. Kim, S. Y. Yang and H. J. Chung. 1977. Studies on the origin of Prunus yedoensis Matsumura. 1. A comparative electrophoretic study on wild P. subhirtella in Mt. Hanla, cultivated P. yedoensis and P. donarium. Korean Journal of Botany 20: 1-5. (in Korean)
29 Iketani, H, T. Katsuki and T. Kawahara. 2006. Prunus $\times$yedoensis 'Somei-yoshino', a correct cultivar name for Yoshino cherry. Journal of Japanese Botany 81: 123-125.
30 Iketani, H, S. Ohta, T. Kawahara, T. Katsuki, N. Mase, Y. Sato and T. Yamamoto. 2007. Analyses of clonal ctatus in 'Someiyoshino' and confirmation of genealogical record in other cultivars of Prunus $\times$yedoensis by microsatellite markers. Breeding Science 57: 1-6.   DOI
31 Innan, H., R. Terauchi, N. T. Miyashita and K. Tsunewaki. 1995. DNA fingerprinting study on the intraspecific variation and the origin of Prunus yedoensis (Somei yoshino). Japanese Journal of Genetics 70: 185-196.   DOI
32 Iwasaki, F. 1991. Investigations on wild somei-yoshino (Prunus yedoensis Matsumura) and related varieties. Bulletin of Agricultural and Forestry Research Center, University of Tsukuba 3: 95-110.
33 Jung, Y. H., M. H. Ko, Y. S. Oh, G. O. Kim, Y. C. Chung, M. H. Kim and M. Y. Oh. 1997. Phylogenetic relationship among selected taxa of Prunus in Mt. Halla and cultivated Prunus yedoensis by the RAPD analysis. Korean Journal of Plant Taxonomy 27: 415-428. (in Korean)   DOI
34 Jung, Y. H., M. H. Ko, Y. S. Oh, S. H. Han, M. H. Kim, S. C. Koh and M. Y. Oh. 1998. Genetic relationship of Prunus yedoensis, native and cultivated, based on internal transcribed spacer sequences of ribosomal DNA. Korean Journal of Genetics 20: 109-116. (in Korean)
35 Jung, Y. H. and M. Y. Oh. 2005. Phylogenetic relationships of Prunus (Rosaceae) in Korea and Japan inferred from chloroplast DNA sequences. Korean Journal of Genetics 27: 279-288.
36 Kato, S., A. Matsumoto, K. Yoshimura, T. Katsuki, K. Iwamoto, T. Kawahara, Y. Mukai, Y. Tsuda, S. Ishio, K. Nakamura and K. Moriwaki. 2014. Origins of Japanese flowering cherry (Prunus subgenus Cerasus) cultivars revealed using nuclear SSR markers. Tree Genetics & Genomes 10: 477-487.   DOI