Regulatory Network Analysis of MicroRNAs and Genes in Neuroblastoma |
Wang, Li
(College of Computer Science and Technology, Key Lab of Symbol Computation and Knowledge Engineer, Ministry of Education, Jilin University)
Che, Xiang-Jiu (College of Computer Science and Technology, Key Lab of Symbol Computation and Knowledge Engineer, Ministry of Education, Jilin University) Wang, Ning (College of Computer Science and Technology, Key Lab of Symbol Computation and Knowledge Engineer, Ministry of Education, Jilin University) Li, Jie (College of Computer Science and Technology, Key Lab of Symbol Computation and Knowledge Engineer, Ministry of Education, Jilin University) Zhu, Ming-Hui (College of Computer Science and Technology, Key Lab of Symbol Computation and Knowledge Engineer, Ministry of Education, Jilin University) |
1 | Chen K, Rajewsky N (2007). The evolution of gene regulation by transcription factors and microRNAs. Nature Reviews Genetics, 8, 93-103. |
2 | Baskerville S, Bartel DP (2005). Microarray profiling of microRNAs reveals frequent coexpression with neighboring miRNAs and host genes. RNA, 11, 241-7. DOI ScienceOn |
3 | Cao G, Huang B, Liu Z, et al (2010). Intronic miR-301 feedback regulates its host gene, ska2, in A549 cells by targeting MEOX2 to affect ERK/CREB pathways. Biochem Biophys Res Common, 396, 978-82. DOI ScienceOn |
4 | Chekmenec DS, Haid C, Kel AE (2005). P-Match: transcription factor binding site search by combining patterns and weight matrices. Nucleic Acids Res, 33, W432-7. DOI ScienceOn |
5 | Di PD, Ambrogio C, Pastorino F (2011). Selective therapeutic targeting of the anaplastic lymphoma kinase with liposomal siRNA induces apoptosis and inhibits angiogenesis in neuroblastoma. Molecular Therapy, 19, 2201-12. DOI |
6 | Griffiths-Jones S, Saini HK, van Dongen S, et al (2008). miRBase: tools for microRNA genomics. Nucleic Acids Res, 36, D154-8. DOI ScienceOn |
7 | Hsu SD, Lin FM, Wu WY, et al (2011). miRTarBase: a database curates experimentally validated microRNA-target interactions. Nucleic Acids Res, 39, D163-9. DOI |
8 | Latchman DS (1997). Transcription factors: an overview. Int J Biochem Cell Biol, 29, 1305-12. DOI ScienceOn |
9 | Jiang QH, Wang YD, Hao YY, et al (2009). miR2 disease: a manually curated database for microRNA deregulation in human disease. Nucleic Acids Res, 37, D98-104. DOI ScienceOn |
10 | Karin M (1990). Too many transcription factors: positive and negative interactions. New Biol, 2, 126-31. |
11 | Langer I, Vertongen P, Perret J, et al (2000). Expression of vascular endothelial growth factor (VEGF) and VEGF receptors in human neuroblastomas. Med Pediatr Oncol, 34, 386-93. DOI |
12 | Naves T, Jawhari S, Jauberteau MO, et al (2013). Autophagy takes place in mutated p53 neuroblastoma cells in response to hypoxia mimetic CoCl2. Biochem Pharmacol, 85, 1153-61. DOI ScienceOn |
13 | Tong L, Yang XX, Liu MF, et al (2012). Mutational analysis of key EGFR pathway genes in Chinese breast cancer patients. Asian Pac J Cancer Prev, 13, 5599-603. 과학기술학회마을 DOI ScienceOn |
14 | Ogura T, Hiyama E, Kamei N, et al (2012 ). Clinical feature of anaplastic lymphoma kinase–mutated neuroblastom. J Pediatr Surg, 47, 1789-96. DOI ScienceOn |
15 | Rodriguez A, Griffiths-Jones S, Ashurst JL (2004). Identification of mammalian microRNA host genes and transcription units. Genome Res, 14, 1902-10. DOI ScienceOn |
16 | Sethupathy P, Corda B, Hatzigeorgiou AG (2006). TarBase: a comprehensive database of experimentally supported animal microRNA targets. RNA, 12, 192-7. |
17 | van Golen CM, Castle VP, Feldman EL (2000). IGF-I receptor activation and BCL-2 overexpression prevent early apoptotic events in human neuroblastoma. Cell Death Differ, 7, 654-65. DOI |
18 | Wang J, Lu M, Qiu C, et al (2010). TransmiR: a transcription factor-microRNA regulation database. Nucleic Acids Res, 38, D119-22. DOI ScienceOn |
19 | Westermark UK, Wilhelm M, Frenzel A, et al (2011). The MYCN oncogene and differentiation in neuroblastoma. Semin Cancer Biol, 21, 256-66. DOI ScienceOn |
20 | Zhang B, Xu ZW, Wang KH, et al (2013). Complex regulatory network of MicroRNAs, transcription factors, gene alterations in adrenocortical cancer. Asian Pac J Cancer Prev, 14, 2265-8. 과학기술학회마을 DOI ScienceOn |
21 | Liu DF, Wu JT, Wang JM, et al (2012). MicroRNA expression profile analysis reveals diagnostic biomarker for human prostate cancer. Asian Pac J Cancer Prev, 13, 3313-7. 과학기술학회마을 DOI ScienceOn |