1 |
Tamura, K., D. Peterson, N. Peterson, G. Stecher, M. Nei and S. Kumar. 2011. MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol. Biol. Evol., 28: 2731-2739.
DOI
|
2 |
Tang, W.C. 1987. Chinese medicinal materials from the sea. Abstract, Chin. Med., 1: 571-600.
|
3 |
Kim, Y.S., K.H. Han, C.B. Kang and J.B. Kim. 2004. Commercial Fishes of the Coastal and Offshore Waters in Korea. 2nd ed. Hangul, Busan, Korea. 333pp. (in Korean)
|
4 |
Kim, Y.U., J.G. Myoung and S.O. Choi. 1984. Eggs development and larvae of the horn fish, Hemiramphus sajori Temminck et Schlegel. Bull. Korean. Fish. Soc., 17: 125-131. (in Korean)
|
5 |
Kitanishi, S., M. Nishio, S. Sagawa, K. Uehara, R. Ogawa, T. Yokoyama, K. Ikeya and K. Edo. 2013. Strong population genetic structure and its implications for the conservation and management of the endangered Itasenpara bitterling. Conserv. Genet., 14: 901-906.
DOI
|
6 |
Kocher, T.D., W.K. Thomas, A. Meyer, S.V. Edwards, S. Paabo, F.X. Villablanca and A.C. Wilson. 1989. Dynamics of mitochondrial DNA evolution in anmals: amplication and sequencing with conserved primers. Proc. Natl. Acad. Sci. USA, 86: 6196-6200.
DOI
|
7 |
Laikre, L., S. Palm and N. Ryman. 2005. Genetic Population Structure of Fishes: Implications for Coastal Zone Management. AMBIO, 34: 111-119.
DOI
|
8 |
Meyer, A., T.D. Kocher, P. Basasibwaki and A.C. Wilson. 1990. Monophyletic origin of Lake Victoria cichlid fishes suggested by mitochondrial DNA sequences. Nature, 347: 550-553.
DOI
|
9 |
Nesbo, C.L., M.O. Arab and K.S. Jakobson. 1998. Heteroplasmy, length and sequence variation in the mtDNA control regions of three percid fish species (Perca fluviatilis, Acerina cernua, Stizostedion lucioperca). Genetics, 148: 1907-1919.
DOI
|
10 |
Teacher, A.G.F. and D.J. Griffiths. 2011. Hapstar: automated haplotype network layout and visualization. Mol. Ecol. Resour., 11: 151-153.
DOI
|
11 |
Xu, X. and M. Oda. 1999. Surface-water evolution of the eastern East China Sea during the last 36,000 years. Mar. Geol., 156: 285-304.
DOI
|
12 |
Nohara, K., H. Takeuchi, T. Tsuzaki, N. Suzuki, O. Tominaga and T. Seikai. 2010. Genetic variability and stock structure of red tilefish Branchiostegus japonicus inferred from mtDNA sequence analysis. Fisheries Sci., 76: 75-81.
DOI
|
13 |
Palumbi, S.R. 1994. Genetic divergence, reproductive isolation, and marine speciation. Annu. Rev. Ecol. Evol. Syst., 25: 547-572.
DOI
|
14 |
Thompson, J.D., D.G. Higgins and T.J. Gibson. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic. Acids. Res., 22: 4673-4680.
DOI
|
15 |
Tsuji, T. and T. Sadakata. 2000. Present status of the halfbeak fisheries in Japan. Bull. Ishikawa Prefect. Fish. Res. Cent., 2: 1-11. (in Japanese)
|
16 |
Xu, L.L., D.X. Wu, X.P. Lin and C. Ma. 2009. The study of the Yellow Sea Warm Current and its seasonal variability. J. Hydrodyn., 21: 159-165.
DOI
|
17 |
Yan, S., G. Catanese, L. Christopher, C.L. Brown, M. Wang, C. Yang and T. Yang. 2015. Phylogeographic study on the chub mackerel (Scomber japonicus) in the Northwestern Pacific indicates the late Pleistocene population isolation. Mar. Ecol., 36: 753-765.
DOI
|
18 |
Yu, H.J., Y. Kai and J.K. Kim. 2016. Genetic diversity and population structure of Hyporhamphus sajori (Beloniformes: Hemiramphidae) inferred from mtDNA control region and msDNA markers. J. Fish. Biol., 89: 2607-2624.
DOI
|
19 |
Zhang, H., T. Yanagimoto, X. Zhang, N. Song and T. Gao. 2016. Lack of population genetic differentiation of a marine ovoviviparous fish Sebastes schlegelii in Northwestern Pacific. Mitochondrial DNA Part A, 27: 1748-1754.
|
20 |
Aquadro, C.F. and B.D. Greenberg. 1983. Human mitochondrial DNA variation and evolution: analysis of nucleotide sequences from seven individuals. Genetics, 103: 287-312.
DOI
|
21 |
Excoffier, L. and H.E.L. Lischer. 2010. Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows. Mol. Ecol. Resour., 10: 564-567.
DOI
|
22 |
von der Heyden, S., M.R. Lipinski and C.A. Matthee. 2010. Remarkably low mtDNA control region diversity in an abundant demersal fish. Mol. Phylogenet. Evol., 55: 1183-1188.
DOI
|
23 |
Kim, I.S., Y. Choi, C.L. Lee, Y.J. Lee, B.J. Kim and J.H. Kim. 2005. Illustrated Book of Korean Fishes. Kyo-Hak Publishing Co. Seoul, 615pp. (in Korean)
|
24 |
Avise, J.C. 2000. Phylogeography: the History and Formation of Species. Cambridge, MA: Harvard University Press.
|
25 |
Canino, M.F., I.B. Spies, S.A. Lowe and W.S. Grant. 2010. Highly discordant nuclear and mitochondrial dna diversities in atka mackerel. Mar. Coast. Fish., 2: 375-387.
DOI
|
26 |
Domitsu, H. and M. Oda. 2006. Linkages between surface and deep circulations in the southern Japan Sea during the last 27,000 years: evidence from planktic foraminiferal assemblages and stable isotope records. Mar. Micropaleontol., 61: 155-170.
DOI
|
27 |
Felsenstein, J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution, 39: 783-791.
DOI
|
28 |
Gorbarenko, S.A. and J.R. Southon. 2000. Detailed Japan Sea paleoceanography during the last 25 kyr: constraints from AMS dating and of planktonic foraminifera. Palaeogeogr. Palaeoclimatol. Palaeoecol., 156: 177-193.
DOI
|
29 |
Grant, W.A.S. and B.W. Bowen. 1998. Shallow population histories in deep evolutionary lineages of marine fishes: insights from sardines and anchovies and lessons for conservation. J. Hered., 89: 415-426.
DOI
|
30 |
Gwak, W.S. and K. Nakayama. 2011. Genetic variation and population structure of the Pacific cod Gadus macrocephalus in Korean waters revealed by mtDNA and msDNA markers. J. Fish. Sci., 77: 945-952.
DOI
|
31 |
Hauser, L. and G.R. Carvalho. 2008. Paradigm shifts in marine genetics: ugly hypotheses slain by beautiful facts. Fish. Fish., 9: 333-362.
DOI
|
32 |
Saitou, N. and M. Nei. 1987. The neighbour-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol., 4: 406-425.
|
33 |
Park, H.S., C.G. Kim, S. Kim, Y.J. Park, H.J. Choi, Z. Xiao, J. Li, Y. Xiao and Y.H. Lee. 2018. Population Genetic Structure of Rock Bream (Oplegnathus fasciatus Temminck & Schlegel, 1884) Revealed by mtDNA COI Sequence in Korea and China. Ocean Sci. J., 53: 261-274.
DOI
|
34 |
Park, Y.A., B.K. Khim and S. Zhao. 1994. Sea level fluctuation in the Yellow Sea basin. J. Korean Soc. of Oceano., 29: 42-49.
|
35 |
Roldan, M.I., R.G. Perrotta, M. Cortey and C. Pla. 2000. Molecular and morphologic approaches to discrimination of variability patterns in chub mackerel, Scomber japonicus. J. Exp. Mar. Biol. Ecol., 253: 63-74.
DOI
|
36 |
Selkoe, K. and R.J. Toonen. 2011. Marine connectivity: a new look at pelagic larval duration and genetic metrics of dispersal. Mar. Ecol. Prog. Ser., 436: 291-305.
DOI
|
37 |
Slatkin, M. 1985. Gene flow in natural populations. Annu. Rev. Ecol. Syst., 16: 393-430.
DOI
|
38 |
Slatkin, M. and R.R. Hudson. 1991. Pairwise comparisons of mitochondrial DNA sequences in stable and exponentially growing populations. Genetics, 129: 555-562.
DOI
|
39 |
Sun, P. and B.J. Tang. 2018. Low mtDNA variation and shallow population structure of the Chinese pomfret Pampus chinensis along the China coast. J. Fish. Biol., 92: 214-228.
DOI
|