Browse > Article

Evolutionary Relationship of Liobagrus mediadiposalis (Teleostei: Amblycipitidae) Populations in Korea Inferred from Cytochrome b DNA Sequences  

Kim, Maeng Jin (Faculty of Applied Marine Sciences, Cheju National University)
Han, Song-Hun (Faculty of Applied Marine Sciences, Cheju National University)
Yang, Hye-Young (Faculty of Applied Marine Sciences, Cheju National University)
Jo, Mi-Ran (Faculty of Applied Marine Sciences, Cheju National University)
Chung, Sang-Chul (Faculty of Applied Marine Sciences, Cheju National University)
Song, Choon Bok (Faculty of Applied Marine Sciences, Cheju National University)
Publication Information
Korean Journal of Ichthyology / v.18, no.4, 2006 , pp. 329-338 More about this Journal
Abstract
Phylogenetic relationships and DNA polymorphism among local populations of the Korean native catfish species, Liobagrus mediadiposalis, have been investigated based on mitochondrial cytochrome b DNA sequences. As a result, three genetically distinct groups of local populations were recognized based on the phylogenetic tree constructed. The first group was called "Nakdong-river group" that included the local populations from Geumho-river, Gyeongho-river, and Deokcheon-river; the second one was "Geum-river group"; the third one was represented as "Seomjin-river group" that included the samples from Seomjin-river, Dongjin-river and Geokum-do. The phylogeny also implied that the ancestral group of L. mediadiposalis have first evolved to Nakdong-river group, and later two local populations (Geum-river and Seomjinriver group) were diverged from the other lineage. DNA polymorphisms we observed were 4.4~4.7% between Geum-river group and Seomjin-river group, 5.1~5.5% between Seomjinriver group and Nakdong-river group, and 5.5~5.7% between Nakdong-river group and Geumriver group. These results indicated the long period of geographic isolation due to the river system in Korea caused such high degrees of DNA polymorphisms between local populations of L. mediadiposalis.
Keywords
evolutionary relationship; Liobagrus mediadiposalis; populations; cytochrome b;
Citations & Related Records
연도 인용수 순위
  • Reference
1 Kim, I.S., C. Youn, C.L. Lee, Y.J. Lee. B.J. Kim and J.H. Kim. 2005. Illustrated book of Korean fishes. Kyo-Hak publishing Co., Ltd., pp. 417-418
2 Son, Y.M. and H.B. Song. 1998. Freshwater fish fauna and distribution in Kojedo, Korea. Korean J. Ichthyol., 10(1) : 87-97
3 Cantatore, P., M. Roberi, G. Pesole, A. Ludovico, F. Milella, M.N. Gadaleta and C. Saccone. 1994. Evolutionary analysis of cytochrome b sequences in some Perciformes: evidence for a slower rate of evolution than mammals. J. Mol. Evol., 39 : 589-597   DOI
4 Choi, K.C. 1973. On the geographical distribution of fresh water fishes south of DMZ in Korea. Korean J. Lim., 6 : 29-36
5 Johns, G.C. and J.C. Avise. 1998. A comparative summary of genetic distances in the vertebrate from the mitochondrial cytochrome b gene. Mol. Biol. Evo., 15(11) : 1481-1490   ScienceOn
6 Esposti, M.D., S.D. Vries, M. Crimi, A. Ghelli, T. Oatarnello and A. Meyer. 1993. Mitochondrial cytochrome b: evolution and structure of the protein. Biochim. Biophys. Acta., 1143 : 243-271   DOI   ScienceOn
7 Felsenstein, J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution, 39(4) : 783- 791   DOI   ScienceOn
8 Jeon, S.R. 1980. Studies on the distribution of fresh-water fishes from Korea. Ph.D. Thesis, Choong-Ang Univ., 85pp
9 Kocher, T.D. and C.A. Stepien. 1997. Molecular systematics of fishes. Academic Press New York, 314pp
10 Min, M.S. and S.Y. Yang. 1986. Classification, distribution and geographic variation of tow species of the genus Moroco in Korea. Korean J. Syst. Zool., 2 : 63-78
11 Mori, T. 1936. Studies on the geographical distribution of fresh water fishes in Korea. Bull. Biogeogr. Soc. Japan, 6 : 35-61
12 Son, Y.M. 1995. On the piscigeography of the freshwater of islands in Korea. Proceeding of '95 ichthyofauna and characteristics of freshwater ecosystem in Korea. pp. 51 -62. (in Korean)
13 Swofford, D.L. 1998. PAUP: phylogenetic analysis using parsimony, version 4.0b8, Sinauer Associates, Sunderland, MA
14 Toshio, O., S.R. Jeon and T. Kobayashi. 1993. Genetic variation and population structure in Korean piscivorous chub, Opsariichthys bidens from Korea. Korean J. Basic. Sci., 7 : 1-10
15 Yang, S.Y. and Y.M. Son. 1986. Genetic and Morphological Variation of the Genus Liobagrus in Korea. Korean J. Syst. Zool., 2(2) : 1-12
16 Son, Y.M. and J.H. Lee. 1989. Karyotypes of genus Liobagrus (Pisces: Amblycipitidae) in Korea. Korean J. Ichthyol., 1(1, 2) : 64-72
17 Meyer, A. 1993. Evolution of mitochondrial DNA in fishes. pp. 1-38. In Molecular biology frontiers, biochemistry and molecular biology of fishes. Vol. 2. Hochachka, P.W. and T.P. Mommsen eds. Elsevier Sci. Pub. AM, 470pp
18 Koh, B.S. and C.B. Song. 2004. Molecular phylogeny of Syngnathiformes fishes inferred from mitochondrial cytochrome b sequences. J. Kor. Fish. Soc., 37(5) : 405 -413
19 Fitch, W.M. 1971. Toward defining the course of evolution: minimum change for a specific tree topolgy. Syst. Zool., 20 : 406-416   DOI   ScienceOn
20 Posada, D. and K.A. Crandall. 1998. Modeltest: testing the model of DNA substitution. Bioinformatics, 14(9) : 817 -818   DOI
21 Song, C.B., T.N. Near and L.M. Page. 1998. Phylogenetic relations among percid fishes as inferred from mitochondrial cytochrome b DNA sequence data. Mol. Phylo. Evol., 10(3) : 343-353   DOI   ScienceOn
22 Jeon, S.R. 1983. Studies on the distribution and key of Cobitididae fishes (Cypriniformes) from Korea. Coll. Thesis SMWU, 11 : 289-321
23 Kim, M.J. 2004. Origin and Biogeography of the Korean perch (Coreoperca herzi) and its relatives based on phylogenetic approach with cytochrome b DNA sequences. M.S. Thesis, Cheju Natl. Univ., 39pp
24 Son, Y.M. 1987. Systematic studies on the torrent catfish, family Amblycipitidae (Pisces: Siluriformes) from Korea. Ph.D. Thesis, Choong-Ang Univ., 81pp
25 Kumar, S., K. Tamura and M. Nei. 2004. Integrated software for molecular evolutionary genetics analysis and sequence alignment. Briefings in Bioinformatics, 5(2) : 150-163   DOI   ScienceOn
26 Orti, G., M.A. Bell, T.E. Reimchen and A. Meyer. 1994. Global survey of mitochondrial DNA sequences in the threespine stickleback: evidence for recent migrations. Evolution, 48 : 608-622   DOI   ScienceOn
27 Son, Y.M. and I.Y. Choo. 1988. Ecological studies of catfish, genus Liobagrus from Korea. Korean Journal of Limnology, 21(4) : 243-251
28 Jeon, S.R. 1986. Studies on the key and distribution of serranid peripheral fresh-water fishes from Korea. Ph.D. Thesis SMWU, 18 : 335-355
29 Perdices, A., C. Cunha and M.M. Coelho. 2004. Phylogenetic of Zacco platypus (Teleostei, Cyprinidae) populations on the upper and middle Chang Jiang (=Yangtze) drainage inferred from cytochrome b sequences. Mol. Phylo. Evol., 31 : 192-203   DOI   ScienceOn
30 Sota, T., M. Takahiko, S. Toshihiko, S. Hitoshi and Y. Kenichiro. 2005. Genetic differentiation of the Gobies Gymnogobius castaneus and G. taranetizi in the region surrounding the sea of Japan as inferred from a mitochondrial gene genealogy. Zoological Science, 22 : 87- 93   DOI   ScienceOn
31 Lindberg, G. 1972. 現世淡水魚類の起源. 東海大學出版社, 336pp
32 Nei, M. and S. Kumar. 2000. Molecular evolution and phylogenetics. Oxford University Press. New York, 333pp
33 Nelson, J.S. 1994. Fishes of the world (3rd ed). John Wiley & Sons, New York, 600pp
34 Saitou, N. and M. Nei. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol., 4(4) : 406-425
35 Zhao, Y., J. Lan and C. Zhang. 2004. A new species of amblycipitid catfish, Xiurenbagrus gigas (Teleostei: Siluriformes), from Guangxi, China. Ichthyol. Res., 51(3) : 228-232
36 Masaru, M., T. Yamagishi, M. Sakaizumi and S.R. Joen. 1997. Mitochondrial DNA variation in the Korean wild population of medaka, Oryzias latipes. Korean J. Limn., 2 : 119-128