Browse > Article
http://dx.doi.org/10.9718/JBER.2009.30.5.373

Constrained Spatiotemporal Independent Component Analysis and Its Application for fMRI Data Analysis  

Rasheed, Tahir (Department of Computer Engineering, Kyung Hee University)
Lee, Young-Koo (Department of Computer Engineering, Kyung Hee University)
Lee, Sung-Young (Department of Computer Engineering, Kyung Hee University)
Kim, Tae-Seong (Department of Biomedical Engineering Kyung Hee University)
Publication Information
Journal of Biomedical Engineering Research / v.30, no.5, 2009 , pp. 373-380 More about this Journal
Abstract
In general, Independent component analysis (ICA) is a statistical blind source separation technique, used either in spatial or temporal domain. The spatial or temporal ICAs are designed to extract maximally independent sources in respective domains. The underlying sources for spatiotemporal data (sequence of images) can not always be guaranteed to be independent, therefore spatial ICA extracts the maximally independent spatial sources, deteriorating the temporal sources and vice versa. For such data types, spatiotemporal ICA tries to create a balance by simultaneous optimization in both the domains. However, the spatiotemporal ICA suffers the problem of source ambiguity. Recently, constrained ICA (c-ICA) has been proposed which incorporates a priori information to extract the desired source. In this study, we have extended the c-ICA for better analysis of spatiotemporal data. The proposed algorithm, i.e., constrained spatiotemporal ICA (constrained st-ICA), tries to find the desired independent sources in spatial and temporal domains with no source ambiguity. The performance of the proposed algorithm is tested against the conventional spatial and temporal ICAs using simulated data. Furthermore, its performance for the real spatiotemporal data, functional magnetic resonance images (fMRI), is compared with the SPM (conventional fMRI data analysis tool). The functional maps obtained with the proposed algorithm reveal more activity as compared to SPM.
Keywords
Independent component Analysis (ICA); Spatiotemporal ICA; Constrained ICA; Statistical parametric mapping (SPM); Functional magnetic resonance imaging (fMRI);
Citations & Related Records
연도 인용수 순위
  • Reference
1 T. P. Jung, S. Makeig, M. Westerfeld, T. Townsend, E. Courshesne and T. J. Sejnowski, "Analysis and visualization of single-trial event-related potentials," Human Brain Mapping, vol. 14, no 3, pp.166-185, 2001   DOI   ScienceOn
2 Q. -H. Lin, Y. -R. Zheng, F. -L. Yin, H. Liang and V. D. Calhoun, "A fast algorithm for one-unit ICA-R," An international journal of information sciences, vol. 177, pp.1265-1275, 2007   DOI   ScienceOn
3 M. J. McKeown, S. "Analysis of fMRI data by blind separation into independent spatial components," Human Brain Mapping, vol. 6, pp.160-188, 1998   DOI   ScienceOn
4 B. B. Biswal and J. L. Ulmer, "Blind Source Separation of Multiple Signal Sources of FMRI Data Sets Using lndependent Component Analysis," J. Comput. Assist. Tomogr., vol. 23. pp. 265-271, 1999   DOI   ScienceOn
5 J. Stone, J. Porrill, N. Porter and N. Hunkin, "Spatiotemporal ICA of fMRI data," Computational Neuroscience Report, 202. 2000
6 A. J. Bell and T. J. Sejnowski, "An information-maximization approach to blind separation and blind deconvolution," Neural Computation, vol. 7, pp.129-1159, 1995
7 J. J. Pekar, "A brief introduction to functional MRI - history and today's developments," IEEE Engineering in Medicine and Biology Magazine, vol. 25, no. 2, pp.24-26, 2006   DOI   ScienceOn
8 V. D. Calhoun, T. Adali, G. D. Pearlson, P. C. M. Van Zijl and J. J. Pekar, "Independent component analysis of fMRI data in the complex domain," Magnetic Resonance in Medicine, vol. 48, pp.180-192, 2002   DOI   ScienceOn
9 T. Rasheed, Y. -K. Lee, S. Y. Lee and T. -S. Kim, "Attenuation of artifacts in EEG signals measured inside a MRI scanner using constrained independent component analysis", Physiological Measurement, vol. 30, pp. 387-404, 2009   DOI   ScienceOn
10 J. -W. Jeong, T. -S. Kim, S. -H. Kim, M. Singh, "Application of independent component analysis with mixture density model to localize brain alpha activity in fMRI and EEG," International Journal of Imaging Systems and Technology, vol. 14, no. 4, pp. 170-180, 2004   DOI   ScienceOn
11 W. Lu and J. C. Rajapakse, "Approach and application of constrained ICA," IEEE Transactions on Neural Networks, vol.16, no. 1, pp.203-212, 2005   DOI   ScienceOn
12 K. Suzuki, "Fast and precise independent component analysis for high field fMRI time series tailoried using prior information on snatiotempooral structure," Human Brain Mapping, vol. 15, pp.54166, 2002
13 V. D. Calhoun, T. Adali, G. D. Pearlson and J. J. Pekar, "Spatial and temporal independent component analysis of functional MRI data containing a pair of task related waveforms," Human Brain Mapping, vol. 13, pp. 43-53, 2001   DOI   ScienceOn
14 P. A. Bandettini, "Processing strategies for time-course data sets in functional MRI of the human brain," Magnetic Resonance in Medicine, 30:161, 1993   DOI   ScienceOn
15 A. Hyvarinen A and E. Oja, "A fast fixed-point algorithm for independent component analysis," Neural Computation, vol. 9, pp.483-492, 1997
16 E. Seifritz, F. Esposito, F. Hennet, H. Mustovic, J. G. Neuhoff, D.Beilecen, G. Tedeschi, K. Scheffler and F. D. Salle, "Spatiotemporal pattern of neural processing in the human auditory cortex," Science, vol. 297, no. 5587, pp. 1706-1708, 2002   DOI   ScienceOn